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The growth of the field of lipidomic analysis is enormous with numerous papers published annually, as shown on the statistics from Web of Science for keywords “lipidomic(s)” and “mass spectrometry” (Fig. 1) with 2923 published papers, where over a hundred of them have been published in Analytical and Bioanalytical Chemistry. The detailed analysis of these papers shows the approximate relative portions for major analytical approaches in lipidomic analysis: 59% liquid chromatography, 29% shotgun (direct infusion), and 12% mass spectrometry imaging. The following authors have contributed the most frequently to this set: X.L. Han (99), G. Liebisch (52), P.J. Meikle (50), R.W. Gross (44), M. Oresic (44), and M.R. Wenk (44). We also highlight five most cited papers from this set [1,2,3,4,5].
In 2015, Analytical and Bioanalytical Chemistry published a previous topical collection on lipidomics [6]. Lipidomic analysis is almost exclusively based on mass spectrometry (MS) analysis [7], starting from low-resolution analyzers (typical QqQ), now shifting more towards tandem mass analyzers with ultrahigh resolving power, e.g., Orbitraps. New trends are the implementation of ion mobility, dedicated approaches for the determination of double-bond positions, and ultrahigh-performance separation techniques to speed up the analysis time, such as ultrahigh-performance liquid chromatography and ultrahigh-performance supercritical fluid chromatography coupled with MS. Current challenges in the field of lipidomics include high variations in concentrations as well as misquantification and misidentifications [8]. Therefore, Lipidomics Standards Initiative (LSI) [9] was recently founded to develop guidelines for lipidomics. These efforts are aligned with other major initiatives in the field, such as Lipid MAPS [10]. Moreover, the International Lipidomic Society (ILS) [11] just started to represent and promote lipidomics through worldwide cooperation also by hosting various interest groups like LSI or the development of reference values for human plasma [12]. These activities are embedded in a series of conferences‚ providing space and time to engage with interest groups and discuss further developments.
This topical collection on Lipidomic Analysis includes research papers and one review from leading lipidomic groups worldwide, which represent latest advances in lipidomics and a variety of methods‚ such as shotgun, LC, and SFC coupled to low- and high-resolution mass spectrometry‚ in line with the current challenges. We express our gratitude to all authors for their excellent contributions, as well as the reviewers, and editorial office for their great efforts to compile this topical collection.
References
Wenk MR. The emerging field of lipidomics. Nat Rev Drug Discov. 2005;4(7):594–610 (733 citations).
Han XL, Gross RW. Shotgun lipidomics: electrospray ionization mass spectrometric analysis and quantitation of cellular lipidomes directly from crude extracts of biological samples. Mass Spectrom Rev. 2005;24(3):367–412 (733 citations).
Matyash V, Liebisch G, Kurzchalia TV, Shevchenko A, Schwudke D. Lipid extraction by methyl-tert-butyl ether for high-throughput lipidomics. J Lipid Res. 2008;49(5):1137–46 (700 citations).
Quehenberger O, Armando AM, Brown AH, Milne SB, Myers DS, Merrill AH, et al. Lipidomics reveals a remarkable diversity of lipids in human plasma. J Lipid Res. 2010;51(11):3299–305 (586 citations).
Ejsing CS, Sampaio JL, Surendranath V, Duchoslav E, Ekroos K, Klemm RW, et al. Global analysis of the yeast lipidome by quantitative shotgun mass spectrometry. Proc Natl Acad Sci U S A. 2009;106(7):2136–41 482 citations.
Holčapek M. Lipidomics. Anal Bioanal Chem. 2015;407(17):4971–2.
Holčapek M, Liebisch G, Ekroos K. Lipidomic analysis. Anal Chem. 2018;90(7):4249–57.
Liebisch G, Ahrends R, Arita M, Arita M, Bowden JA, Ejsing CS, et al. Lipidomics needs more standardization. Nature Metabolism. 2019;1(8):745–7.
Lipidomics Standard Initiative website, https://lipidomics-standards-initiative.org/
Lipid MAPS website, http://www.lipidmaps.org/
International Lipidomic Society website, https://lipidomicssociety.org/
Burla B, Arita M, Arita M, Bendt AK, Cazenave-Gassiot A, Dennis EA, et al. MS-based lipidomics of human blood plasma: a community-initiated position paper to develop accepted guidelines. J Lipid Res. 2018;59(10):2001–17.
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Published in the topical collection Current Progress in Lipidomics with guest editors Michal Holčapek, Gerhard Liebisch, and Kim Ekroos.
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Holčapek, M., Liebisch, G. & Ekroos, K. Lipidomic analysis. Anal Bioanal Chem 412, 2187–2189 (2020). https://doi.org/10.1007/s00216-020-02419-9
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DOI: https://doi.org/10.1007/s00216-020-02419-9