Abstract
Fluorescence single-molecule spectroscopy is an appropriate tool for modern bioanalysis. This technique enables the development of ultra sensitive assays, especially when combined with self-quenching probes. In this review we report novel DNA, enzyme, and antibody assays based on mono-labeled fluorescent probes that are quenched by photoinduced electron transfer (PET).
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Tinnefeld P, Sauer M (2005) Angew Chem Int Ed 44:2642–2671
Neuweiler H, Sauer M (2005) Anal Chem 77:179A–185A
Greulich KO (2004) Curr Pharm Biotechnol 5:243–259
Ha T, Enderle T, Ogletree DF, Chemla DS, Selvin PR, Weiss S (1996) Proc Natl Acad Sci USA 93:6264–6268
Ha T, Ting AY, Liang J, Caldwell WB, Deniz AA, Chemla DS, Schultz PG, Weiss S (1999) Proc Natl Acad Sci USA 96:893–898
Seisenberger G, Ried MU, Endress T, Büning H, Hallek M, Bräuchle C (2001) Science 294:1929–1932
Maiti S, Haupts U, Webb WW (1997) Proc Natl Acad Sci USA 94:11753–11757
Li H, Ying L, Green JJ, Balasubramanian S, Klenerman D (2003) Anal Chem 75:1664–1670
Castro A, Williams JGK (1997) Anal Chem 69:3915–3920
Wittwer CT, Herrmann MG, Moss AA, Rasmussen RP (1997) BioTechniques 22:130–138
Tyagi S, Kramer FR (1996) Nat Biotechnol 14:303–308
Förster T (1948) Ann Phys 6:55–75
Stryer L, Haugland RP (1967) Proc Natl Acad Sci USA 58:719–726
Stryer L (1978) Annu Rev Biochem 47:819–846
Schuler B (2005) ChemPhysChem 6:1206–1220
Marcus RA, Sutin N (1985) Biochim Biophys Acta 811:265–320
Rehm D, Weller A (1970) Isr J Chem 8:259–271
Neuweiler H, Schulz A, Bohmer M, Enderlein J, Sauer M (2003) J Am Chem Soc 125(18):5324–5330
Seidel CAM, Schulz A, Sauer M (1996) J Phys Chem 100L:5541–5553
Sauer M, Han KT, Ebert V, Müller R, Schulz A, Seeger S, Wolfrum J, Arden-Jacob J, Deltau G, Marx NJ, Zander C, Drexhage KH (1995) J Fluoresc 5:247–261
Edman L, Mets Ü, Rigler R (1996) Proc Natl Acad Sci U S A 93:6710–6715
Eggeling C, Fries JR, Brandt L, Günther R, Seidel CAM (1998) Proc Natl Acad Sci U S A 95:1556–1561
Knemeyer JP, Marmé N, Sauer M (2000) Anal Chem 72:3717–3724
Heinlein T, Knemeyer JP, Piestert O, Sauer M (2003) J Phys Chem B 107:7957–7964
Kurata S, Kanagawa T, Yamada K, Torimura M, Yokomaku T, Kamagata Y, Kurane R (2001) Nucleic Acids Res 29:e34
Piestert O, Barsch H, Buschmann V, Heinlein T, Knemeyer JP, Weston KD, Sauer M (2003) Nano Lett 3:979–982
Watt RM, Voss EW (1977) Immunochemistry 14:533–541
Merenyi G, Lind J, Shen X (1988) J Phys Chem 92:134–137
DeFelippis MR, Murthy CP, Broitman F, Weinraub D, Faraggi M, Klapper MH (1991) J Phys Chem 95:3416–3419
Buschmann V, Weston KD, Sauer M (2003) Bioconjugate Chem 14:195–204
Marmé N, Knemeyer JP, Sauer M, Wolfrum J (2003) Bioconjugate Chem 14:1133–1139
Yang H, Luo GB, Karnchanaphanurach P, Louie TM, Rech I, Cova S, Xun LY, Xie XS (2003) Science 302:262–266
Zhang CY, Chao SY, Wang TH (2005) Analyst 130:483–488
Wang TH, Peng Y, Zhang C, Wong PK, Ho CM (2005) J Am Chem Soc 127:5354–5359
Kasha M (1963) Radiat Res 20:55
West W, Pearce S (1965) J Phys Chem 69:1894
Marmé N, Friedrich A, Denapaite D, Hakenbeck R, Knemeyer JP (2006) Chem Phys Lett 428:440–445
Marmé N, Habl G, Knemeyer JP (2005) Chem Phys Lett 408:221–225
Knemeyer JP, Marmé N, Häfner B, Habl G, Schäfer G, Müller M, Nolte O, Sauer M, Wolfrum J (2005) Int J Environ An Ch 85:625–637
Stöhr K, Häfner B, Nolte O, Wolfrum J, Sauer M, Herten DP (2005) Anal Chem 77:7195–7203
Marmé N, Friedrich A, Müller M, Nolte O, Wolfrum J, Hoheisel JD, Sauer M (2006) Nucleic Acids Res 34:e90
Neuweiler H, Schulz A, Vaiana AC, Smith JC, Kaul S, Wolfrum J, Sauer M (2002) Angew Chem Int Ed 41:4769–4773
Soussi T (1996) Immunol Today 17:354–356
Lubin R, Schlichtholz B, Bengoufa D, Zalcman G, Trédaniel J, Hirsch A, Caron de Fromentel C, Preudhomme C, Fenaux P, Fournier G, Mangnin P, Laurent-Puig P, Pelletier G, Schlumberger M, Desgrandchamps F, Le Duc A, Peyrat JP, Janin N, Bressac B, Soussi T (1993) Cancer Res 53:5872–5876
Hotary KB, Allen ED, Brooks PC, Datta NS, Long MW, Weiss SJ (2003) Cell 114:33–45
Boire A, Covic L, Agarwal A, Jacques S, Sherifi S, Kuliopulos A (2005) Cell 120:303–313
Almholt K, Lund LR, Rygaard J, Nielsen BS, Dano K, Romer J, Johnsen M (2004) Int J Cancer 113:525–532
Fukuda ME, Iwadate Y, Machida T, Hiwasa T, Nimura Y, Nagai Y, Takiguchi M, Tanzawa H, Yamaura A, Seki N (2005) Cancer Res 65:5190–5194
Packard BZ, Toptygin DD, Komoriya A, Brand L (1996) Proc Natl Acad Sci 83:11640–11645
Packard BZ, Toptygin DD, Komoriya A, Brand L (1997) Biophys Chem 67:167–176
Packard BZ, Komoriya A, Nanda V, Brand L (1998) J Phys Chem B 102(10):1820–1827
Marmé N, Knemeyer JP, Sauer M, Wolfrum J (2004) Angew Chem Int Ed 43(29):3798–3801, Angew Chem (2004), 116:3886–3890
Staudt TM, Knemeyer L, Kräusslich HG, Knemeyer JP, Marmé N (2005) SPIE Proc 5704:112–119
Staudt TM, Kräusslich HG, Marmé N, Knemeyer JP (2007) Self-quenching peptide substrates for ultra sensitive HIV-protease assays. Int J Environ An Ch, accepted
Marmé N, Staudt TM, Spatz J, Knemeyer JP (2005) Int J Environ An Ch 85:741–751
Sauer M, Zander C, Müller R, Ullrich B, Drexhage KH, Kaul S, Wolfrum J (1997) Appl Phys B 65:427–431
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Marmé, N., Knemeyer, JP. Sensitive bioanalysis—combining single-molecule spectroscopy with mono-labeled self-quenching probes. Anal Bioanal Chem 388, 1075–1085 (2007). https://doi.org/10.1007/s00216-007-1365-1
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DOI: https://doi.org/10.1007/s00216-007-1365-1