Abstract
Roundup Ready soybean powder has been subjected to different amounts of DNA fragmentation to assess the accuracy of real-time PCR on processed food. Certified reference material (CRM) containing 10 g kg−1 of Roundup Ready soybean (ERM-BF410d) prepared by a dry-mixing processing method was exposed to water at two temperatures, using three different mixing devices, or to baking temperature (250°C) for 30 min. The amount of DNA extracted from the different samples was quantified by fluorimetry. The amount of fragmentation of the extracted DNA was characterised by gel and capillary electrophoresis and the percentage of genetically modified (GM) soybean was determined by a double quantitative real-time PCR method. Measurement of the event GTS 40-3-2 (RUR) was possible in all the treated materials, because small amplicons were amplified. Correct RUR percentages could be measured for intact powders with little or no DNA fragmentation. For samples with a high level of DNA degradation, however, the accuracy of the measurement was found to depend on the method used for DNA extraction. Genomic DNA isolated by use of silica resin resulted in statistically significant overestimation of the amount of GM.
Similar content being viewed by others
References
Anklam E, Gadani F, Heinze P, Pijnenburg H, Van Den Eede G (2002) Eur Food Res Technol 214:3–262
Moser M, Kniel B, Schmitz-Winnenthal, Hupfer C, Engel KH (1999) Getreide Mehl und Brot 53:334–341
Pauli U, Liniger M, Zimmermann A (1988) Z Lebensm Unters Forsch A 207:264–267
Straub JA, Hertel C, Hammes WP (1999) Z Lebensm Unters Forsch A 208:77–82
Lipp M, Bluth A, Eyquem F, Kruse L, Schimmel H, van den Eede G, Anklam E (2001) Eur Food Res Technol 212:497–504
Hupfer C, Mayer J, Hotzel H, Sachse K, Engel K-H (1999) Eur Food Res Technol 209:301–304
Berben G (2003) Personal communication
Trapmann S, Catalani P, Conneely P, Corbisier P, Gancberg D, Hannes E, Le Guern L, Kramer GN, Prokisch J, Robouch P, Schimmel H, Zeleny R, Pauwels J, van den Eede G, Weighardt F, Mazzara M, Anklam E (2002) EUR 20273 EN 2002, ISBN 92-894-3725-1
Murray MG, Thompson WF (1980) Nucleic Acids Res 8:4321–4325
Dellaporta SL, Wood J, Hicks JB (1983) Plant Mol Biol Report 1:19–21
Singer VL, Jones LJ, Yue ST, Haugland RP (2002) Anal Biochem 249:228–238
Arumuganathan K, Earle ED (1991) Plant Mol Biol Report 9:211–215
Sambrook J, Fritsch EF, Maniatis T (eds) (1989) Molecular cloning - a laboratory manual, 2nd edn. Cold Spring Harbour Laboratory Press, New York
Swiss Food Manual (Schweizerisches Lebensmittelbuch) (eds) Bundesamt für Gesundheit, Molekularbiologische Methoden, Eidgenössische rucksachen- und Materialzentrale, Bern
Taveniers I, Windels P, Van Bockstaele E, De Loose M (2001) Eur Food Res Technol 213:417–424
Peirson SN, Butler JN, Foster RG (2003) Nucleic Acids Res 31(14):e73
Commission Regulation (EC) N° 1830/2003. OJ N° L268/24, 18.10.2003, Art 7.2
Terry CF, Harris N, Perkes HC (2002) J AOAC Int 85:768–774
Trapmann S, Schimmel H, Kramer N, Van den Eede G, Pauwels J (2002) J AOAC Int 85:775–779
Rückold S, Grobecker KH, Isengard H-D (2001) Fresenius J Anal Chem 370:189–193
Ebbehoj KF, Thomsen PD (1991) Meat Sci 30:221–234
Meyer R, Candrian U, Lüthy J (1994) J AOAC Int 77:617–622
Garcia-Cañas V, González R, Cifuentes A (2002) J Agric Food Chem 50:1016–1021
Garcia-Cañas V, González R, Cifuentes A (2004) Electrophoresis 25:2219–2226
Wiseman G (2002) State of the art and limitations of quantitative polymerase chain reaction. J AOAC Int 85:792–796
Collins RA, Ko L-S, Lui K-Y, Xing J, Lau LT, Yu AC (2004) Food Control 15:471–478
Lipp M, Anklam E, Stave JW, Lipp M, Anklam E, Stave JW (2002) J AOAC Int 83:919–927
Yoshimura T, Kuribara H, Matusoka T, Kodama T, Futo S, Ogawa M, Watanabe S, Aoki N, Iizuka T, Akiyama H, Maitani T, Sunagawa M, Issiki K, Hino A (2003) Proceedings of the 117th AOAC Annual Meeting
Peano C, Samson MC, Palmieri L, Gulli M, Marmiroli N (2004) J Agric Food Chem 52:6962–6968
Acknowledgements
We thank Isabelle Taverniers (CLO, Belgium), for performing some initial PCR analysis with RRS event-specific primers, and Esther Kock from the RIKILT Institute for Food Safety (The Netherlands), for performing external RUR analysis.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Corbisier, P., Trapmann, S., Gancberg, D. et al. Quantitative determination of Roundup Ready soybean (Glycine max) extracted from highly processed flour. Anal Bioanal Chem 383, 282–290 (2005). https://doi.org/10.1007/s00216-005-0013-x
Received:
Revised:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00216-005-0013-x