Skip to main content
Log in

SSR marker-assisted improvement of fiber qualities in Gossypium hirsutum using G. barbadense introgression lines

  • Original Paper
  • Published:
Theoretical and Applied Genetics Aims and scope Submit manuscript

Abstract

Key message

This study demonstrates the first practical use of CSILs for the transfer of fiber quality QTLs into Upland cotton cultivars using SSR markers without detrimentally affecting desirable agronomic characteristics.

Abstract

Gossypium hirsutum is characterized by its high lint production and medium fiber quality compared to extra-long staple cotton G. barbadense. Transferring valuable traits or genes from G. barbadense into G. hirsutum is a promising but challenging approach through a traditional interspecific introgression strategy. We developed one set of chromosome segment introgression lines (CSILs), where TM-1, the genetic standard in G. hirsutum, was used as the recipient parent and the long staple cotton G. barbadense cv. Hai7124 was used as the donor parent by molecular marker-assisted selection (MAS). Among them, four CSILs, IL040-A4-1, IL080-D6-1, IL088-A7-3 and IL019-A2-6, found to be associated with superior fiber qualities including fiber length, strength and fineness QTL in Xinjiang were selected and backcrossed, and transferred these QTLs into three commercial Upland cotton cultivars such as Xinluzao (XLZ) 26, 41 and 42 grown in Xinjiang. By backcrossing and self-pollinating twice, five improved lines (3262-4, 3389-2, 3326-3, 3380-4 and 3426-5) were developed by MAS of background and introgressed segments. In diverse field trials, these QTLs consistently and significantly offered additive effects on the target phenotype. Furthermore, we also pyramided two segments from different CSILs (IL080-D6-1 and IL019-A2-6) into cultivar 0768 to accelerate breeding process purposefully with MAS. The improved lines pyramided by these two introgressed segments showed significant additive epistatic effects in four separate field trials. No significant alteration in yield components was observed in these modified lines. In summary, we first report that these CSILs have great potential to improve fiber qualities in Upland cotton MAS breeding programs.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1

Similar content being viewed by others

Abbreviations

RIL:

Recombinant inbred line

DH:

Doubled haploid

SSR:

Simple sequence repeat

QTL:

Quantitative trait locus/loci

CSIL:

Chromosome segment introgression line

MAB:

Marker-assisted backcross

BC:

Backcross

References

  • Bernacchi D, Beck-Bunn T, Emmatty D, Eshed Y, Inai S, Lopez J, Petiard V, Sayama H, Uhlig J, Zamir D, Tanksley S (1998) Advanced backcross QTL analysis of tomato. II. Evaluation of near-isogenic lines carrying single-donor introgressions for desirable wild QTL-alleles derived from Lycopersicon hirsutum and L. pimpinellifolium. Theor Appl Genet 97:170–180

    Article  CAS  Google Scholar 

  • Culp TW, Harrell D, Kerr T (1979) Some genetic implications in the transfer of high fiber strength genes to upland cotton. Crop Sci 19:481–484

    Article  Google Scholar 

  • Eshed Y, Zamir D (1995) An introgression line population of Lycopersicon pennellii in the cultivated tomato enables the identification and fine mapping of yield-associated QTL. Genetics 141:1147–1162

    CAS  PubMed  Google Scholar 

  • Eshed Y, Zamir D (1996) Less-than-additive epistatic interactions of quantitative trait loci in tomato. Genetics 143:1807–1817

    CAS  PubMed  Google Scholar 

  • Fisher RA (1915) Frequency distribution of the values of the correlation coefficient in samples from an indefinitely large population. Biometrika 10:507–521

    Google Scholar 

  • Guo WZ, Cai CP, Wang CB, Zhao L, Wang L, Zhang TZ (2008) A preliminary analysis of genome structure and composition in Gossypium hirsutum. BMC Genomics 9:314–331

    Article  PubMed Central  PubMed  Google Scholar 

  • Hallauer AR, Mirando FJB (1981) Quantitative genetics in maize breeding. Iowa State University Press, Ames

    Google Scholar 

  • Jiang CX, Wright RJ, El-Zik KM, Paterson AH (1998) Polyploid formation created unique-avenues for response to selection in Gossypium (cotton). Proc Natl Acad Sci USA 95:4419–4424

    Article  CAS  PubMed  Google Scholar 

  • Jiang GH, Xu CG, Li XH, He YQ (2004) Characterization of the genetic basis for yield and its component traits of rice revealed by doubled haploid population. Acta Genet Sin 31:63–72

    PubMed  Google Scholar 

  • Kloth RH (1998) Analysis of commonality for traits of cotton fiber. Cotton Sci 2:17–22

    Google Scholar 

  • Kohel RJ, Yu J, Park YH (2001) Molecular mapping and characterization of traits controlling fiber quality in cotton. Euphytica 121:163–172

    Article  CAS  Google Scholar 

  • Mather K, Jinks JJ (1971) Biometrical genetics. Chapman and Hall, London

    Book  Google Scholar 

  • May OL (1999) Genetic variation for fiber quality. In: Basra AS (ed) Cotton fibers developmental biology, quality improvement, and textile processing. Food Products Press, New York, pp 183–229

    Google Scholar 

  • May OL, Green CC (1994) Genetic variation for fiber properties in elite Pee Dee cotton populations. Crop Sci 34:684–690

    Article  Google Scholar 

  • Mckenzie WH (1970) Fertility relationships among interspecific hybrid progenies of Gossypium. Crop Sci 10:571–574

    Article  Google Scholar 

  • Meredith WR Jr, Bridge RR (1972) Heterosis and gene action in cotton. Crop Sci 12:304–310

    Google Scholar 

  • Meredith WR Jr, Bridge RR (1984) Genetic contributions to yield changes in upland cotton. In: Fehr W (ed) Genetic contributions to yield gains of five major crop plants. Crop Science Society of America, Madison, pp 75–86

    Google Scholar 

  • Paterson AH, Saranga Y, Menz M, Jiang CX, Wright RJ (2003) QTL analysis of genotype environment interaction affecting cotton fiber quality. Theor Appl Genet 106:384–396

    CAS  PubMed  Google Scholar 

  • Peleman JD, Voort JR (2003) Breeding by design. Trends Plant Sci 8:330–334

    Article  CAS  PubMed  Google Scholar 

  • Reinisch MJ, Dong JD, Brubaker CL, Stelly DM, Wendel JF (1994) A detailed RFLP map of cotton, Gossypium hirsutum × Gossypium barbadense: chromosome organization and evolution in a disomic polyploidy genome. Genetics 138:829–847

    CAS  PubMed  Google Scholar 

  • Rong JK, Feltus EA, Waghmare VN, Pierce GJ, Chee PW (2007) Meta-analysis of polyploid cotton QTL shows unequal contributions of subgenomes to a complex network of genes and gene clusters implicted in lint fiber development. Genetics 176:2577–2588

    Article  CAS  PubMed  Google Scholar 

  • SAS Institute (1994) The SAS system for Windows. Release 6.10. SAS Inst., Cary, NC

  • Stephens SG (1949) The cytogenetics of speciation in Gossypium. I. Selective elimination of the donor parent genotype in inter-specific backcrosses. Genetics 34:627–637

    Google Scholar 

  • Tang B, Jenkins JN, McCarty JC, Watson CE (1993) F2 hybrids of host plant germplasm and cotton cultivars. II. Heterosis and combining ability for fiber properties. Crop Sci 33:706–710

    Article  Google Scholar 

  • Tanksley SD, Nelson CJ (1996) Advanced backcross QTL analysis: a method for the simultaneously discovery and transfer of valuable QTLs from unadapted germplasm into elite breeding lines. Theor Appl Genet 92:191–203

    Article  CAS  PubMed  Google Scholar 

  • Ulloa M, Meredith WR Jr (2000) Genentic linkage map and QTL analysis of agronomic and fiber quality traits in a intraspecific population. Cotton Sci 3:161–170

    Google Scholar 

  • Wang P, Zhu YJ, Song XL, Cao ZB, Ding YZ, Liu BL, Zhu XF, Wang S, Guo WZ, Zhang TZ (2012) Inheritance of long staple fiber quality traits of Gossypium barbadense in G. hirsutum background using CSILs. Theor Appl Genet 124:1415–1428

    Article  PubMed  Google Scholar 

  • Wilson FD, Wilson RL (1975) Breeding potentials of non cultivated cottons. I. Some agronomic and fiber properties of selected parents and their F1 hybrids. Crop Sci 15:763–766

    Article  Google Scholar 

  • Yu SB, Li JX, Xu CG, Tan Y, Li XH, Zhang QF (2002) Identification of quantitative trait loci and epistatic interactions for plant height and heading date in rice. Theor Appl Genet 104:619–625

    Article  CAS  PubMed  Google Scholar 

  • Zhao FM, Zhang GQ, Zeng RZ, Yang ZL, Zhu HT, Zhong BQ, Ling YH, He GH (2009) Additive effects and epistasis effects of QTL for plant height and its components using single segment substitution lines (SSSLs) in rice. Acta Agron Sin 35:48–56

    CAS  Google Scholar 

  • Zhao H, Liu J, Shi L, Xu F, Wang Y (2010) Development of boron- efficient near isogenic lines of Brassica napus and their response to low boron stress at seedling stage. Russ J Genet 46:57–63

    Article  CAS  Google Scholar 

  • Zhuang JY, Fan YY, Rao ZM, Wu JL, Xia YW, Zheng KL (2002) Analysis on additive effects and additive-by-additive epistatic effects of QTLs for yield traits in a recombinant inbred line population of rice. Theor Appl Genet 105:1137–1145

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgments

This study was financially supported in part by grants from the Major State Basic Research Development Program of China (973 Program) (2011CB109300) and the National High Technology Research and Development Program of China (863 Program) (2011AA10A102), Philosophy Doctoral Fund Program of Xinjiang BingTuan Group (2010JC01), the Priority Academic Program Development of Jiangsu Higher Education Institutions and 111 program.

Conflict of interest

The authors declare that they have no competing interests.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Tianzhen Zhang.

Additional information

Communicated by M. Gore.

Electronic supplementary material

Below is the link to the electronic supplementary material.

Supplementary material 1 (DOC 340 kb)

Rights and permissions

Reprints and permissions

About this article

Cite this article

Cao, Z., Wang, P., Zhu, X. et al. SSR marker-assisted improvement of fiber qualities in Gossypium hirsutum using G. barbadense introgression lines. Theor Appl Genet 127, 587–594 (2014). https://doi.org/10.1007/s00122-013-2241-3

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00122-013-2241-3

Keywords

Navigation