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Fungal chromosomes

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Abstract

There are now four well-established methods to examine the chromosomes of filamentous fungi: mapping genes to linkage groups by recombination analyses, light-microscopic observation of chromosomes in meiotic divisions, electron-microscopic observation of the synaptonemal complexes between homologous chromosomes in prophase of meiosis, and separation of chromosomes as individual bands by pulsed field gel electrophoresis. These techniques and their contributions are described in brief with special reference toNeurospora. A fifth technique will be used more and more in characterizing chromosomes at the molecular level as DNA sequencing is completed for a limited number of the fungi. However, only the molecular studies of chromosome structures as they relate to centromeres, telomeres or nucleolus organizer regions are discussed, as is the potential usefulness of DNA sequencing to identify the junctions of chromosome rearrangements.

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References

  • Asch D. K., Frederick G., Kinsey J. A. and Perkins D. D. 1992 Analysis of junction sequences resulting from integration at nonhomologous loci inNeurospora crassa.Genetics 130: 737–748

    PubMed  CAS  Google Scholar 

  • Beadle G. W. and Tatum E. L. 1941 Genetic control of biochemical reactions inNeurospora.Proc. Natl. Acad. Sci. USA 27: 499–506

    Article  PubMed  CAS  Google Scholar 

  • Bojko M. 1988 Presence of abnormal synaptonemal complexes in heterothallic species ofNeurospora.Genome 30: 697–709

    PubMed  CAS  Google Scholar 

  • Bojko M. 1990 Synaptic adjustment of inversion loops inNeurospora crassa.Genetics 124: 593–598

    PubMed  CAS  Google Scholar 

  • Butler D. K. and Metzenberg R. L. 1989 Premeiotic change of nucleolus organizer size inNeurospora.Genetics 122: 783–791

    PubMed  CAS  Google Scholar 

  • Butler D. K. and Metzenberg R. L. 1990 Expansion and contraction of the nucleolus organizer region ofNeurospora: changes originate in both proximal and distal segments.Genetics 126: 325–333

    PubMed  CAS  Google Scholar 

  • Carle G. F. and Olson M. V. 1985 An electrophoretic karyotype for yeast.Proc. Natl. Acad. Sci. USA 82: 3756–3760

    Article  PubMed  CAS  Google Scholar 

  • Cassidy J. R., Moore D., Lu B. C. and Pukkila P. J. 1984 Unusual organization and lack of recombination in the ribosomal RNA genes ofCoprinus cinereus.Curr. Genet. 8: 607–613

    Article  CAS  Google Scholar 

  • Centola M. and Carbon J. 1994 Cloning and characterization of centromeric DNA fromNeurospora crassa.Mol. Cell. Biol. 14: 1510–1519

    PubMed  CAS  Google Scholar 

  • Giles N. H., Geever R. F., Asch D. K., Avalos J. and Case M. E. 1991 Organization and regulation of theqa (quinic acid) genes inNeurospora crassa and other fungi.J. Hered. 82: 1–7

    PubMed  CAS  Google Scholar 

  • Gillies C. B. 1972 Reconstruction of theNeurospora crassa pachytene karyotype from serial sections of synaptonemal complexes.Chromosoma 36: 119–130

    Article  PubMed  CAS  Google Scholar 

  • Gillies C. B. 1979 The relationship between synaptinemal complexes, recombination nodules and crossing over inNeurospora crassa bivalents and translocation quadrivalents.Genetics 91: 1–17

    PubMed  Google Scholar 

  • Hansen E. M., Brasier C. M., Shaw D. S. and Hamm P. B. 1986 The taxonomic structure ofPhytophthora megasperma: Evidence for emerging biological species groups.Trans. Br. Mycol. Soc. 87: 557–573

    Article  Google Scholar 

  • Kistler H. C. and Miao P. W. 1992 New modes of genetic change in filamentous fungi.Annu. Rev. Phytopathol. 30: 131–152

    Article  PubMed  CAS  Google Scholar 

  • Krumlauf R. and Marzluf G. A. 1980 Genome organization and characterization of the repetitive and inverted repeat DNA sequences inNeurospora crassa.J. Biol. Chem. 255: 1138–1145

    PubMed  CAS  Google Scholar 

  • Lu B. C. 1993 Spreading the synaptonemal complex ofNeurospora crassa.Chromosoa 102: 464–472

    Article  CAS  Google Scholar 

  • McClintock B. 1945Neurospora. I. Preliminary observations of the chromosomes ofNeurospora crassa.Am. J. Bot. 32:671–678

    Article  Google Scholar 

  • Metzenberg R. L. and Grotelueschen J. 1995 Restriction polymorphism maps ofNeurospora crassa: update.Fungal Genet. Newsl. 43: 82–90

    Google Scholar 

  • Metzenberg R. L., Stevens J. N., Selker E. U. and Morzycka-Wroblewska E. 1984 A method for finding the genetic map position of cloned DNA fragments.Neurospora Newsl. 31: 35–39

    Google Scholar 

  • Metzenberg R. L., Stevens J. N., Selker E. U. and Morzycka-Wroblewska E. 1985 Identification and distribution of 5S rRNA genes inNeurospora crassa.Proc. Natl. Acad. Sci. USA 82: 2067–2071

    Article  PubMed  CAS  Google Scholar 

  • Miao V. P., Covert S. F. and VanEtten H. D. 1991 A fungal gene for antibiotic resistance on a dispensable (“B”) chromosome.Science 254: 1773–1776

    Article  PubMed  CAS  Google Scholar 

  • Mills D. and McCluskey K. 1990 Electrophoretic karyotypes of fungi: The new cytology.Mol. Plant-Microbe Interact. 3: 351–357

    CAS  Google Scholar 

  • Orbach M. 1992 (no title)Fungal Genet. Newsl. 39: 92

    Google Scholar 

  • Orbach M. J., Vollrath D., Davis R. W. and Yanofsky C. 1988 An electrophoretic karyotype ofNeurospora crassa.Mol Cell. Biol. 8:1469–1473

    PubMed  CAS  Google Scholar 

  • Perkins D. D. 1990 A new report concerning nuclear DNA content and premeiotic DNA synthesis in fungi.Fungal Genet. Newsl. 37: 9

    Google Scholar 

  • Perkins D. D. 1997 Chromosome rearrangements inNeurospora and other filamentous fungi.Adv. Genet. (in press)

  • Perkins D. D. and Barry E. G. 1977 The cytogenetics ofNeurospora.Adv. Genet. 19: 133–285

    Article  PubMed  CAS  Google Scholar 

  • Perkins D. D. and Turner B. C. 1988Neurospora from natural populations: Toward the population biology of a haploid eukaryote.Exp. Mycol. 12: 91–131

    Article  Google Scholar 

  • Perkins D. D., Turner B. C. and Barry E. G. 1976 Strains ofNeurospora collected from nature.Evolution 30: 281–313

    Article  Google Scholar 

  • Perkins D. D., Radford A., Newmeyer D. and Björkman M. 1982 Chromosomal loci ofNeurospora crassa.Microbiol. Rev. 46: 426–570

    PubMed  CAS  Google Scholar 

  • Perkins D. D., Raju N. B., Barry E. G. and Butler D. K. 1995 Chromosome rearrangements that involve the nucleolus organizer region inNeurospora.Genetics 141: 909–923

    PubMed  CAS  Google Scholar 

  • Pukkila P. J. and Lu B. C. 1985 Silver staining of meiotic chromosomes in the fungusCoprinus cinereus.Chromosoma 91: 108–112

    Article  PubMed  CAS  Google Scholar 

  • Raju N. B. 1978 Meiotic nuclear behaviour and ascospore formation in five homothallic species ofNeurospora.Can. J. Bot. 56: 754–763

    Article  Google Scholar 

  • Raju N. B. 1980 Meiosis and ascospore genesis inNeurospora.Eur. J. Cell Biol. 23: 208–223

    PubMed  CAS  Google Scholar 

  • Raju N. B. 1986 A simple fluorescent staining method for meiotic chromosomes ofNeurospora.Mycologia 78: 901–906

    Article  CAS  Google Scholar 

  • Raju N. B. and Newmeyer D. 1977 Giant ascospores and abnormal croziers in a mutant ofNeurospora crassa.Exp. Mycol. 1:152–165

    Article  Google Scholar 

  • Rodland K. D. and Russell P. J. 1983 Segregation of heterogeneous rDNA segments during demagnification of aNeurospora crassa strain possessing a double nucleolar organizer.Curr. Genet. 7: 379–384

    Article  CAS  Google Scholar 

  • Rossen J. M. and Westergaard M. 1966 Studies on the mechanism of crossing over. II. Meiosis and the time of meiotic chromosome replication in the ascomyceteNeottiella rutilans (Fr.) Dennis.C. R. Trav. Lab. Carlsberg 35: 233–260

    PubMed  CAS  Google Scholar 

  • Russell P. J. and Rodland K. D. 1986 Magnification of rDNA gene number in aNeurospora crassa strain with a partial deletion of the nucleolus organizer.Chromosoma 93: 337–340

    Article  PubMed  CAS  Google Scholar 

  • Russell P. J., Wagner S., Rodland K. D., Feinbaum R. L., Russell J. P., Bret-Harte M. S., Free S. J. and Metzenberg R. L. 1984 Organization of the ribosomal ribonucleic acid genes in various wild-type strains and wild-collected strains ofNeurospora.Mol. Gen. Genet. 196: 275–282

    Article  PubMed  CAS  Google Scholar 

  • Schechtman M. G. 1987 Isolation of telomere DNA fromNeurospora crassa.Mol. Cell. Biol. 7: 3168–3177

    PubMed  CAS  Google Scholar 

  • Schechtman M. G. 1989 Segregation patterns ofNeurospora chromosome ends: mapping chromosome tips.Fungal Genet. Newsl. 36: 71–73

    Google Scholar 

  • Schwartz D. C. and Cantor C. R. 1984 Separation of yeast chromosome-sized DNAs by pulsed field gradient gel electrophoresis.Cell 37: 67–75

    Article  PubMed  CAS  Google Scholar 

  • Selker E. U., Yanofsky C., Driftmier K., Metzenberg R. L., Alzner-Deweerd B. and RajBhandary U. L. 1981 Dispersed 5S RNA genes inN. crassa: Structure, expression and evolution.Cell 24: 819–828

    Article  PubMed  CAS  Google Scholar 

  • Singleton J. R. 1953 Chromosome morphology and the chromosome cycle in the ascus ofNeurospora crassa.Am. J. Bot. 40: 124–144

    Article  Google Scholar 

  • Smith M. L. and Glass N. L. 1996 Mapping translocation breakpoints by orthogonal field agarose-gel electrophoresis.Curr. Genet. 29: 301–305

    Article  PubMed  CAS  Google Scholar 

  • von Wettstein D., Rasmussen S. W. and Holm P. B. 1984 The synaptonemal complex in genetic segregation.Annu. Rev. Genet. 18: 331–413

    Article  Google Scholar 

  • Westergaard M. and von Wettstein D. 1972 The synaptinemal complex.Annu. Rev. Genet. 6: 71–110

    Article  PubMed  CAS  Google Scholar 

  • Zickler D. 1977 Development of the synaptonemal complex and the “recombination nodules” during meiotic prophase in the seven bivalents of the fungusSordaria macrospora Auersw.Chromosoma 61: 289–316

    Article  PubMed  CAS  Google Scholar 

  • Zolan M. E., Heyler N. K. and Stassen N. Y. 1994 Inheritance of chromosome-length polymorphisms inCoprinus cinereus.Genetics 137: 87–94

    PubMed  CAS  Google Scholar 

Download references

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Barry, E.G. Fungal chromosomes. J. Genet. 75, 255–263 (1996). https://doi.org/10.1007/BF02966306

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