Skip to main content
Log in

Comparative study of morphological, cultural and molecular markers for the characterization ofPseudocercosporella herpotrichoides isolates

  • Research Articles
  • Published:
European Journal of Plant Pathology Aims and scope Submit manuscript

Abstract

Nirenberg's classification system and the polymerase chain reaction (PCR) combined with restriction enzyme digestion of an amplified ribosomal DNA fragment, were compared for the characterization of sixty isolates ofPseudocercosporella herpotrichoides, from various geographical areas and with differing fungicide sensitivity. With Nirenberg's system, it was possible to identify most isolates asP. herpotrichoides var.herpotrichoides orP. herpotrichoides var.acuformis. However, identification was slow and sometimes inconclusive as overlap occurred between the two varieties for all criteria examined. Molecular markers identified two distinct types among the isolates tested and generally good correlation was found between the PCR-based assay and Nirenberg's system, but the molecular assay was more accurate and faster.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Belkhiri A and Dick MW (1988) Comparative studies on the DNA ofPythium species and some possibly related taxa. J. gen. Microbiol. 134: 2673–2683

    PubMed  Google Scholar 

  • Cavelier N and Le Page D (1985) Caractéristiques des souches dePseudocercosporella herpotrichoides (Fron) Deighton (agent du piétin-verse des céréales) résistantes aux fongicides benzimidazoles et thiophanates: pouvoir pathogène, capacité de développement. Premières Journées d'Etudes sur les Maladies des Plantes, Versailles, Annales ANPP 1: 49–56

    Google Scholar 

  • Cavelier N, Rousseau M and Le Page D (1987) Variabilité dePseudocercosporella herpotrichoides, agent du piétin-verse des céréales: comportementin vivo de deux types d'isolats et d'une population en mélange. Z. Pflanzenkr. Pflanzenschutz 94(6): 590–599

    Google Scholar 

  • Chen W, Hoy JW and Schneider RW (1992) Species-specific polymorphisms in transcribed ribosomal DNA of fivePythium species. Experiment. Mycol. 16: 22–34

    Google Scholar 

  • Creighton NF (1989) Identification of W-type and R-type isolates ofPseudocercosporella herpotrichoides. Plant Pathol. 38: 484–493

    Google Scholar 

  • Creighton NF, Cavelier N and Fitt BDL (1989) Pathogenicity to wheat and rye ofPseudocercosporella herpotrichoides isolates from France and the U.K. Mycol. Res. 92(1): 13–17

    Google Scholar 

  • Cubeta MA, Echandi E, Abernethy T and Vilgalys R (1991) Characterization of anastomosis groups of binucleateRhizoctonia species using restriction analysis of an amplified ribosomal RNA gene. Phytopathology 81(11): 1395–1400

    Google Scholar 

  • Frei U and Wenzel G (1993) Differentiation and diagnosis ofPseudocercosporella herpotrichoides (Fron) Deighton with genomic DNA probes. J. Phytopathol. 139: 229–237

    Google Scholar 

  • Gac ML (1991) Etude de la variabilité dePseudocercosporella herpotrichoides (Fron) Deighton, agent du piétin-verse des céréales par la technique PCR. D.E.A., Université de Nantes, 28 pp.

  • Gallimore K, Knights IK and Barnes G (1987) Sensitivity ofPseudocercosporella herpotrichoides to the fungicide prochloraz. Plant Pathol. 36: 290–296

    Google Scholar 

  • Goulds A and Fitt BDL (1988) The comparative epidemiology of eyespot (Pseudocercosporella herpotrichoides) types in winter cereal crops. Proceedings of the Brighton Crop Protection Conference — Pests and Diseases 8C-29: 1035–1040

    Google Scholar 

  • Henson JM, Goins T, Grey W, Mathre DE and Elliott ML (1993) Use of polymerase chain reaction to detectGaeumannomyces graminis DNA in plants grown in artificially and naturally infested soil. Phytopathology 83(3): 283–287

    Google Scholar 

  • Hollins TW, Scott PR and Paine JR (1985) Morphology, benomyl resistance and pathogenicity to wheat and rye of isolates ofPseudocercosporella herpotrichoides. Plant Pathol. 34: 369–379

    Google Scholar 

  • Johanson A and Jeger MJ (1993) Use of PCR for detection ofMycosphaerella fijiensis andM. musicola, the causal agents of Sigatoka leaf spots in banana and plantain. Mycol. Res. 97(6): 670–674

    Google Scholar 

  • Julian AM and Lucas JA (1990) Isozyme polymorphism in patho-types ofPseudocercosporella herpotrichoides and related species from cereals. Plant Pathol. 39: 178–190

    Google Scholar 

  • King JE and Griffin MJ (1985) Survey of benomyl resistance inPseudocercosporella herpotrichoides on winter wheat and barley in England and Wales in 1983. Plant Pathol. 34: 272–283

    Google Scholar 

  • Lange-de la Camp M (1966a) Die Wirkungsweise vonCercosporella herpotrichoides Fron, dem Erreger der Halmbruchkrankheit des Getreides. I. Feststellung der Krankheit. Beschaffenheit und Infektionsweise ihres Erregers. Phytopathol. Z. 55: 34–66

    Google Scholar 

  • Lange-de la Camp M (1966b) Die Wirkungsweise vonCercosporella herpotrichoides Fron, dem Erreger der Halmbruchkrankheit des Getreides. II. AggressivitÄt des Erregers. Phytopathol. Z. 56: 155–190

    Google Scholar 

  • Lee SB, Milgroom MG and Taylor JW (1988) A rapid, high yield mini-prep method for isolation of total genomic DNA from fungi. Fungal Gen. Newsl. 35: 23–24

    Google Scholar 

  • Leroux P and Gredt M (1985) Caractéristiques des souches dePseudocercosporella herpotrichoides, agent du piétin-verse des céréales, résistantes à des inhibiteurs de la biosynthèse des stérols. C. R. Acad. Sc. Paris sér. III, 301(17): 785–788

    Google Scholar 

  • Leroux P and Gredt M (1988) Caractérisation des souches dePseudocercosporella herpotrichoides, agent du piétin-verse des céréales résistantes à des substances antimitotiques et à des inhibiteurs de la biosynthèse des stérols. Agronomie 8(8): 719–729

    Google Scholar 

  • Leroux P and Marchegay P (1991) Caractérisation des souches dePseudocercosporella herpotrichoides, agent du piétin-verse des céréales, résistantes au prochloraze, isolées en France sur blé tendre d'hiver. Agronomie 11(9): 767–776

    Google Scholar 

  • Maraite H, Delforge C, Meunier S and Tetelain A (1985) Distribution of MBC-resistance inPseudocercosporella herpotrichoides on winter wheat in Belgium. Meded. Fac. Landbouwwet. Rijksuniv. Gent 50(3b): 1173–1180

    Google Scholar 

  • Mauler A and Fehrmann H (1987) Erfassung der AnfÄlligkeit von Weizen gegenüberPseudocercosporella herpotrichoides. I. Untersuchungen zur PathogenitÄt verschiedener Formen des Erregers. Z. Pflanzenkr. Pflanzenschutz 94(6): 630–636

    Google Scholar 

  • Nazar RN, Hu X, Schmidt J, Culham D and Robb J (1991) Potential use of PCR-amplified ribosomal intergenic sequences in the detection and differentiation of verticillium wilt pathogens. Physiol. Mol. Plant Pathol. 39: 1–11

    Google Scholar 

  • Nicholson P, Hollins TW, Rezanoor HN and Anamthawat-Jonsson K (1991) A comparison of cultural, morphological and DNA markers for the classification ofPseudocercosporella herpotrichoides. Plant Pathol. 40: 584–594

    Google Scholar 

  • Nicholson P and Rezanoor HN (1994) The use of random amplified polymorphic DNA to identify pathotype and detect variation inPseudocercosporella herpotrichoides. Mycol. Res. 98(1): 13–21

    Google Scholar 

  • Nicholson P, Rezanoor HN and Hollins TW (1993) Classification of a world-wide collection of isolates ofPseudocercosporella herpotrichoides by RFLP analysis of mitochondrial and ribosomal DNA and host range. Plant Pathol. 42: 58–66

    Google Scholar 

  • Nirenberg HI (1981) Differenzierung der Erreger der Halmbruchkrankheit. I. Morphologie. Z. Pflanzenkr. Pflanzenschutz 88(5): 241–248

    Google Scholar 

  • Nirenberg HI (1984) Differenzierung der Erreger der Halmbruchkrankheit. II. Physiologische Reaktionen in Kultur. Z. Pflanzenkr. Pflanzenschutz 91(3): 225–235

    Google Scholar 

  • Poupard P, Simonet P, Cavelier N and Bardin R (1993) Molecular characterization ofPseudocercosporella herpotrichoides isolates by amplification of ribosomal DNA internal transcribed spacers. Plant Pathol. 42: 873–881

    Google Scholar 

  • Priestley RA, Dewey FM, Nicholson P and Rezanoor HN (1992) Comparison of isoenzyme and DNA markers for differentiating W-, R- and C-pathotypes ofPseudocercosporella herpotrichoides. Plant Pathol. 41: 591–599

    Google Scholar 

  • Sanders PL, De Waard MA and Loerakker WM (1986) Resistance to carbendazim inPseudocercosporella herpotrichoides from Dutch wheat fields. Neth. J. Plant Pathol. 92: 15–20

    Google Scholar 

  • Schesser K, Luder A and Henson JM (1991) Use of polymerase chain reaction to detect the take-all fungus,Gaeumannomyces graminis, in infected wheat plants. Appl. environ. Microbiol. 57(2): 553–556

    Google Scholar 

  • Scott PR and Hollins TW (1980) Pathogenic variation inPseudocercosporella herpotrichoides. Ann. appl. Biol. 94: 297–300

    Google Scholar 

  • Scott PR, Hollins TW and Muir P (1975) Pathogenicity ofCercosporella herpotrichoides to wheat, barley, oats and rye. Trans. br. mycol. Soc. 65(3): 529–538

    Google Scholar 

  • Stammler G and Seemüller E (1993) Specific and sensitive detection ofPhytophthora fragariae var.rubi in raspberry roots by PCR amplification. Z. Pflanzenkr. Pflanzenschutz 100(4): 394–400

    Google Scholar 

  • Takeuchi T and Kuninaga S (1994) Genetic relationships inPseudocercosporella herpotrichoides determined from DNA relatedness. Mycol. Res. 98(9): 1059–1064

    Google Scholar 

  • Thomas D, Maraite H and Boutry M (1992) Identification of rye- and wheat-types ofPseudocercosporella herpotrichoides with DNA probes. J. gen. Microbiol. 138: 2305–2309

    Google Scholar 

  • Ward E and Akrofi AY (1994) Identification of fungi in theGaeumannomyces-Phialophora complex by RFLPs of PCR-amplified ribosomal DNAs. Mycol. Res. 98(2): 219–224

    Google Scholar 

  • White TJ, Bruns T, Lee S and Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ and White TJ (eds) PCR Protocols: A Guide to Methods and Applications (pp. 315–322). Academic Press, San Diego

    Google Scholar 

  • Xue B, Goodwin PH and Annis SL (1992) Pathotype identification ofLeptosphaeria maculans with PCR and oligonucleotide primers from ribosomal internal transcribed spacer sequences. Physiol. Mol. Plant Pathol. 41: 179–188

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Gac, M.L., Montfort, F., Cavelier, N. et al. Comparative study of morphological, cultural and molecular markers for the characterization ofPseudocercosporella herpotrichoides isolates. Eur J Plant Pathol 102, 325–337 (1996). https://doi.org/10.1007/BF01878127

Download citation

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF01878127

Key words

Navigation