Skip to main content
Log in

Construction and screening of M13 phage libraries displaying long random peptides

  • Research Papers
  • Published:
Molecular Diversity Aims and scope Submit manuscript

Summary

We have constructed two phage display libraries expressing N-terminal pIII fusions in M13 composed of 37 and 43 random amino acid domains, respectively. The D38 library expresses 37 random amino acids with a central alanine residue, and the DC43 library contains 43 random amino acids with a central cysteine flanked by two glycine residues, giving the displayed peptide the potential to form disulfide loops of various sizes. We demonstrate that the majority of random sequences in both libraries are compatible in pentavalent display with phage viability. The M13 phage display vector itself has been engineered to contain a factor Xa protease cleavage site to provide an alternative to acid elution during affinity selection. An in-frame amber mutation has been inserted between the pIII cloning sites to allow for efficient selection against nonrecombinant phage in the library. These libraries have been panned against mAb 7E11-C5, which recognizes the prostate-specific membrane antigen (PSM). Isolated phage display a consensus sequence that is homologous to a region in the PSM molecule.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Scott, J.K. and Smith, G.P.,Searching for peptide ligands with an epitope library, Science, 249 (1990) 386–390.

    PubMed  Google Scholar 

  2. Cwirla, S.E., Peters, E.A., Barret, R.W. and Dower, W.J.,Peptides on phage: A vast library of peptides for identifying ligands, Proc. Natl. Acad. Sci. USA, 87 (1990) 378–6382.

    Google Scholar 

  3. Devlin, J.J., Panganiban, L.C. and Devlin, P.E.,Random peptide libraries: A source of specific protein binding molecules, Science, 249 (1990) 404–406.

    PubMed  Google Scholar 

  4. Smith, G.P.,Filamentous fusion phage: Novel expression vectors that display cloned antigens on the virion surface, Science, 228 (1985) 1315–1317.

    PubMed  Google Scholar 

  5. Bass, S., Greene, R. and Wells, J.A.,Hormone phage: An enrichment method for variant proteins with altered binding properties, Proteins, 8 (1990) 309–314.

    PubMed  Google Scholar 

  6. Willis, A.E., Perham, R.N. and Wraith, D.,Immunological properties of foreign peptides in multiple display on a filamentous bacteriophage, Gene, 128 (1993) 79–83.

    PubMed  Google Scholar 

  7. Clackson, T. and Wells, J.A.,In vitro selection from protein and peptide libraries, Trends Biotechnol., 12 (1994) 173–184.

    PubMed  Google Scholar 

  8. Davidson, A.R. and Sauer, R.T.,Folded proteins occur frequently in libraries of random amino acid sequences, Proc. Natl. Acad. Sci. USA, 91 (1994)2146–2150.

    PubMed  Google Scholar 

  9. Zhang, R. and Snyder, G.H.,Factors governing selective formation of specific disulfides in synthetic variants of α-conotoxin, Biochemistry, 30 (1991) 11343–11348.

    PubMed  Google Scholar 

  10. McConnell, S.J. and Hoess, R.H.,Tendamistat as a scaffold for conformationally constrained phage peptide libraries, J. Mol. Biol., 250 (1995) 460–470.

    PubMed  Google Scholar 

  11. McCafferty, I, Griffiths, A.D., Winter, G. and Chiswell, D.J.,Phage antibodies: Filamentous phage displaying antibody variable domains, Nature, 348 (1990) 552–554.

    PubMed  Google Scholar 

  12. Hoogenboom, H.R., Griffiths, A.D., Johnson, K.S., Chiswell, D.J., Hudson, P. and Winter, G,Multi-subunit proteins on the surface of filamentous phage: Methodologies for displaying antibody (Fab) heavy and light chains, Nucleic Acids Res., 15 (1991) 4133–4137.

    Google Scholar 

  13. Horoszwicz, J.S., Leong, S.S. and Murphy, G.P.,Monoclonal antibodies to a new antigenic marker in epithelial cells and serum of prostate cancer patients, Anticancer Res., 7 (1987) 927–936.

    PubMed  Google Scholar 

  14. Fowlkes, D.M., Adams, M.A., Fowler, V.A. and Kay, B.K.,Multipurpose vectors for peptide expression on the M13 viral surface, Biotechniques, 13 (1992) 422–427.

    PubMed  Google Scholar 

  15. McConnell, S.J., Uveges, A.J. and Spinella, D.G.,A comparison of plate versus liquid amplification of M13 phage display libraries, Biotechniques, 18(5) (1995) 803–806.

    PubMed  Google Scholar 

  16. Smith, G.P. and Scott, J.K.,Libraries of peptides and proteins displayed on filamentous phage, Methods Enzymol., 217 (1993) 228–257.

    PubMed  Google Scholar 

  17. Israeli, R.S., Powell, C.T., Fair, W.R. and Heston, W.D.W.,Molecular cloning of a complementary DNA encoding a prostate-specific membrane antigen, Cancer Res., 53 (1993) 227–230.

    PubMed  Google Scholar 

  18. O'Neil, K.T., Hoess, R.H., Jackson, S.A., Ramachandran, N., Mousa, S.A. and DeGrado, W.F.,Identification of novel peptide antagonists for GPIIb/IIIa from a conformationally constrained phage peptide library, Proteins, 14 (1992) 509–515.

    PubMed  Google Scholar 

  19. Kay, B.K., Adey, N.B., He, Y.S., Manfredi, J.P., Mataragnon, A.H. and Fowlkes, D.M.,An M13 phage library displaying random 38-amino-acid peptides as a source of novel sequences with affinity to selected targets, Gene, 128 (1993) 59–65.

    PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

McConnell, S.I., Uveges, A.J., Fowlkes, D.M. et al. Construction and screening of M13 phage libraries displaying long random peptides. Mol Divers 1, 165–176 (1996). https://doi.org/10.1007/BF01544954

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF01544954

Keywords

Navigation