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Characterization of the dnaA gene carried by lambda transducing phage

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Summary

Specialized transducing phages λdnaA were obtained by inducing lysogens in which λtna was integrated at the tnaA region of the Escherichia coli chromosome; the tnA region is located in the vicinity of the dnaA gene. The dnaA - deletion derivatives of λdnaA were isolated from the lysate of λdnaA grown on bacteria carrying a transposon Tn3.

The structures of various transducing phages thus obtained were determined by heteroduplex DNA mapping. From these results, the transducing fragment of 13.8-kb-long was divided into nine domains. Upon infection of UV-irradiated cells with the phage, production of polypeptides of 49 kD and 42 kD was specifically associated with infections by the dnaA and recF transducing phages. Polypeptides of 49 kD and 42 kD appeared to be coded for by dnaA and recF genes, respectively. The dnaA gene was assigned to the region of 2.8-kb-long which extends by 2.4 kb in the counterclockwise direction on the E. coli genetic map and 0.4 kb in the opposite direction, as measured from the nearest HindIII site close to the tnaA gene. The recF gene was also discovered to lie very close to dnaA in the order of tnaA-dnaA-recF.

Merogenotes heterozygous for the dnaA gene were constructed by introducing F′100-12 carrying λdnaA into the recipients with different mutations at or near dnaA. For combinations, F′(λdnaA +)/dnaA46 and F′(λdna +)/dna-83, dnaA + was trans-dominant, whereas the dnaA + was recessive for F′(λdnaA +)/dna-5. For F′(λdnaA +)/dna-167, the result of the transdominance test was affected by the growth media employed; dnaA + was dominant on a λ-broth plate, and dna-167 was dominant on an M9-minimal plate. Thus, transdominance of dnaA + in heterozygotes is affected by difference in mutations and growth media.

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References

  • Appleyard RK (1954) Segregation of new lysogenic types during growth of a doubly lysogenic strain derived from Escherichia coli K12. Genetics 39:440–452

    Google Scholar 

  • Bachmann B, Low KB, Taylor A (1976) Recalibrated linkage map of Escherichia coli K12. Bacteriol Rev 40:116–167

    Google Scholar 

  • Bachmann BJ, Low KB (1980) Linkage map of Escherichia coli K12, Edition 6. Microbiol Rev 44:1–56

    Google Scholar 

  • Beyersmann D, Messer W, Schlicht M (1974) Mutants of Escherichia coli B/r defective in deoxyribonucleic acid initiation: dnaI, a new gene for replication. J Bacteriol 118:783–789

    Google Scholar 

  • Bonner WM, Laskey RA (1974) A film detection method for tritium-labeled proteins and nucleic acids in polyacrylamide gels. Eur J Biochem 46:83–88

    Google Scholar 

  • Borck K, Beggs JD, Brammar WJ, Hopkins AS, Murray NE (1976) The construction in vitro of transducing derivatives of phage lambda. Mol Gen Genet 146:199–207

    Google Scholar 

  • Carl PL (1970) Escherichia coli mutants with temperature-sensitive synthesis of DNA. Mol Gen Genet 109:107–122

    Google Scholar 

  • Davidson N, Szybalski W (1971) Physical and chemical characteristics of lambda DNA. In: Hershey AD (ed), The bacteriophage lambda. Cold Spring Harbor Laboratory Cold Spring Harbor, N.Y., p 45

    Google Scholar 

  • Davis RW, Simon M, Davidson N (1971) Electron microscope heteroduplex methods for mapping of base sequence homology in nucleic acids. Methods in Enzymology 21:413–428

    Google Scholar 

  • Fiandt M, Honigman A, Rosenvold EC, Szybalski W (1977) Precise measurement of the b2 deletion in coliphage lambda. Gene 2:289–293

    Google Scholar 

  • Ganesan AK, Seawell PC (1975) The effect of lexA and recF mutations on post-replication repair and DNA synthesis in Escherichia coli K12. Mol Gen Genet 141:189–205

    Google Scholar 

  • Gartner TK, Riley M (1965) Isolation of mutants affecting tryptophanase production in Escherichia coli. J Bacteriol 89:313–318

    Google Scholar 

  • Gotfried F, Wechsler JA (1977) Dominance of dnaA + to dnaA in Escherichia coli. J Bacteriol 130:963–964

    Google Scholar 

  • Guarneros G, Echols H (1973) Thermal asymmetry of site-specific recombination by bacteriophage λ. Virology 52:30–38

    Google Scholar 

  • Hansen FG, Rasmussen K (1977) Regulation of the dnaA product in Escherichia coli. Mol Gen Genet 155:219–225

    Google Scholar 

  • Hansen FG, Meyenberg K (1979) Characterization of the dnaA, gyrB and other genes in the dnaA region of the Escherichia coli chromosome on specialized transducing phages λtna. Mol Gen Genet 175:135–144

    Google Scholar 

  • Hirota Y, Mordoh J, Jacob F (1970) On the process of cellular division in Escherichia coli. III. Thermosensitive mutants of Escherichia coli altered in the process of DNA initiation. J Mol Biol 55:369–387

    Google Scholar 

  • Horii ZI, Clark AJ (1973) Genetic analysis of the RecF pathway of genetic recombination in Escherichia coli K-12: isolation and characterization of mutants. J Mol Biol 80:327–344

    Google Scholar 

  • Inokuchi H, Yamao F, Sakano H, Ozeki H (1979) Identification of transfer RNA suppressors in Escherichia coli. I. Amber suppressor su+2, an anticodon mutant of tRNA Gln2 . J Mol Biol 132:649–662

    Google Scholar 

  • Kato T, Rothman RH, Clark AJ (1977) Analysis of the role of recombination and repair in mutants of Escherichia coli by UV irradiation. Genetics 87:1–18

    Google Scholar 

  • Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680–685

    Google Scholar 

  • Laskey RA, Mills AD (1975) Quantitative film detection of 3H and 14C in polyacrylamide gels by fluorography. Eur J Biochem 56:335–341

    Google Scholar 

  • Liedke-Kulke M, Kaiser AD (1967) The c-region of coliphage 21. Virology 32:475–481

    Google Scholar 

  • Low B (1968) Formation of merodiploids in matings with a class of Rec- recipient strains of Escherichia coli K12. Proc Natl Acad Sci USA 60:160–167

    Google Scholar 

  • Miki T, Hiraga S, Nagata T, Yura T (1978) Bacteriophage λ carrying the Escherichia coli chromosomal region of the replication origin. Proc Natl Acad Sci USA 75:5099–5103

    Google Scholar 

  • Miki T, Kimura M, Hiraga S, Nagata T, Yura T (1979) Cloning and physical mapping of the dnaA region of the Escherichia coli chromosome. J Bacteriol 140:817–824

    Google Scholar 

  • Myrialdo H, Siminovitch L (1972) The morphogenesis of bacteriophage lambda IV. Identification of gene products and control of the expression of the morphogenetic information. Virology 48:785–823

    Google Scholar 

  • Murray K, Murray NE (1975) Phage lambda receptor chromosome for DNA fragments made with restriction endonuclease III of Haemophilus influenzae and restriction endonuclease I of Escherichia coli. J Mol Biol 98:551–564

    Google Scholar 

  • Nisen PD, Kopecko DJ, Chou J, Cohen SN (1977) Site-specific DNA deletions occuring adjacent to the termini of a transposable ampicilin resistance element (Tn3). J Mol Biol 117:975–998

    Google Scholar 

  • Ohshima Y, Ozeki H, Amamura M, Horiuchi T (1973) Isolation and characterization of a plaque-forming lac-transducing phage ϕ80plac with special reference to its integration and excision. Mol Gen Genet 126:303–317

    Google Scholar 

  • Russell RL, Abelson JN, Landy A, Gefter ML, Brenner S, Smith JD (1970) Duplicate genes for tyrosine transfer RNA in Escherichia coli. J Mol Biol 47:1–13

    Google Scholar 

  • Ryan MJ (1976) Coumermycin A1: A preferential inhibitor of replicative DNA synthesis in Escherichia coli I. In vivo characterization. Biochemistry 15:3769–3777

    Google Scholar 

  • Sakakibara Y, Mizukami T (1980) A temperature-sensitive Escherichia coli mutant defective in DNA replication: dnaN, a new gene adjacent to the dnaA gene. Mol Gen Genet (in press)

  • Sato K, Nishimune Y, Sato M, Numich R, Matsushiro A, Inokuchi H, Ozeki H (1968) Suppressor-sensitive mutants of coliphage ϕ80. Virology 34:637–649

    Google Scholar 

  • Schwartz DO, Beckwith JR (1969) Mutagens which cause deletions in Escherichia coli. Genetics 61:371–376

    Google Scholar 

  • Sharp PA, Hsu MT, Ohtsubo E, Davidson N (1972) Electron microscope heteroduplex studies of sequence relations among plasmids of Escherichia coli I. Structure of F-prime factors. J Mol Biol 71:471–497

    Google Scholar 

  • Studier FW (1973) Analysis of bacteriophage T7 early RNAs and proteins on slab gel. J Mol Biol 79:237–248

    Google Scholar 

  • Takeda Y, Hirota Y (1979) Gene controlling DNA initiation in Escherichia coli: dnaA + and suppressor genes of dnaA -. Annual Report of the National Institute of Genetics (Japan) 29:21–25

    Google Scholar 

  • Weigle J (1966) Assembly of phage lambda in vitro. Proc Natl Acad Sci USA 55:1462–1466

    Google Scholar 

  • Yamagishi H, Ozeki H (1972) Comparative study of thermal inactivation of phage ϕ80 and lambda. Virology 48:316–322

    Google Scholar 

  • Yamagishi H, Inokuchi H, Ozeki H (1976a) Excision and duplication of su3+-transducing fragments carried by bacteriophage ϕ80 I. Novel structure of ϕ80sus2psu3+ DNA molecules. J Virology 18:1016–1023

    Google Scholar 

  • Yamagishi H, Inokuchi H, Ozeki H (1976b) Excision and duplication of su3+-transducing fragments carried by bacteriophage ϕ80 II. Red- or Rec-dependent excision and duplication. J Mol Biol 106:133–150

    Google Scholar 

  • Zahn G, Tippe-Schindler R, Messer W (1977) Trans-dominance of dnaA mutants in Escherichia coli. Mol Gen Genet 153:45–49

    Google Scholar 

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Communicated by T. Yura

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Murakami, A., Inokuchi, H., Hirota, Y. et al. Characterization of the dnaA gene carried by lambda transducing phage. Molec. Gen. Genet. 180, 235–247 (1980). https://doi.org/10.1007/BF00425835

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  • DOI: https://doi.org/10.1007/BF00425835

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