Summary
Two PstI fragments (5.3x106 and 4.3x106 daltons) coding for Anacystis nidulans rRNA genes were cloned. The cloned rDNAs were characterized by restriction endonuclease mapping, DNA-RNA hybridization analysis and the R-loop technique. The results indicated that both fragments contained 16S, 23S and 5S rRNA genes in this order. A tRNA gene(s) was detected in the spacer region between 16S and 23S rRNA genes. The organization of A. nidulans rRNA genes resembles those of E. coli and of Euglena chloroplasts rather than those of higher plant chloroplasts.
Similar content being viewed by others
References
Bedbrook JR, Kolodner R, Bogorad L (1977) Zea mays chloroplast ribosomal RNA genes are part of a 22,000 base pair inverted repeat. Cell 11:739–749
Brosius J, Dull TJ, Sleeter DD, Noller HF (1981) Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli. J Mol Biol 148:107–127
Delaney SF, Herdman M, Carr NG (1976) In: Lewin RA (ed) The genetics of algae. Blackwell, Oxford, pp 7–28
Doolittle WF (1972) Ribosomal ribonucleic acid synthesis and maturation in the blue-green alga Anacystis nidulans. J Bacteriol 111:316–324
Dyer TA, Bowman CM (1979) Nucleotide sequences of chloroplast 5S ribosomal ribonucleic acid in flowering plants. Biochem J 183:595–604
Graf L, Kössel H, Stutz E (1980) Sequencing of 16S-23S spacer in a ribosomal RNA operon of Euglena gracilis chloroplast DNA reveals two tRNA genes. Nature 286:908–910
Grunstein M, Hogness DS (1975) Colony hybridization: A method for the isolation of cloned DNAs that contain a specific gene. Proc Natl Acad Sci USA 72:3961–3965
Kratz WA, Myers J (1955) Nutrition and growth of several blue-green algae. Amer J Bot 42:282–287
Kusuda J, Shinozaki K, Takaiwa F, Sugiura M (1980) Characterization of the cloned ribosomal DNA of tobacco chloroplasts. Mol Gen Genet 178:1–7
Lund E, Dahlberg JE, Lindahl L, Jaskunas SR, Dennis PP, Nomura M (1976) Transfer RNA genes between 16S and 23S rRNA genes in rRNA transcription units of E. coli. Cell 7:165–177
Marmur J (1961) A procedure for the isolation of deoxyribonucleic acid from micro-organisms. J Mol Biol 3:208–218
Mazur BJ, Rice D, Haselkorn R (1980) Identification of blue-green algal nitrogen fixation genes by using heterologous DNA hybridization probes. Proc Natl Acad Sci USA 77:186–190
Orozco EM Jr, Gray PW, Hallick RB (1980) Euglena gracilis chloroplast ribosomal RNA transcription units. I. The location of transfer RNA, 5S, 16S and 23S ribosomal RNA genes. J Biol Chem 255:10991–10996
Rochaix JD, Malnoe P (1978) Anatomy of the chloroplast ribosomal DNA of Chlamydomonas reinhardii. Cell 15:661–670
Southern EM (1975) Detection of specific sequences among DNA fragments separated by gel electrophoresis. J Mol Biol 98:503–517
Stewart WDP (1980) Some aspects of structure and function in N2-fixing cyanobacteria. Annu Rev Microbiol 34:497–536
Sugiura M (1980) Purification of the T4 DNA ligase by Blue Sepharose chromatography. Anal Biochem 108:227–229
Sugiura M, Kusuda J,(1979) Molecular cloning of tobacco chloroplast ribosomal RNA genes. Mol Gen Genet 172:137–141
Sugiura M, Kusuda J, Shinozaki K, Takaiwa F (1980) Cloning and characterization of chloroplast ribosomal RNA genes: In: Osawa S et al. (eds) Genetics and evolution of RNA polymerase, tRNA and ribosomes. University of Tokyo Press, pp 437–449
Sugiura M, Takanami M (1967) Analysis of the 5′-terminal nucleotide sequences of ribonucleic acids, II. Comparison of the 5′-terminal nucleotide sequences of ribosomal RNAs from different organisms. Proc Natl Acad Sci USA 58:1595–1602
Sutcliffe JG (1979) Complete nucleotide sequence of the Escherichia coli plasmid pBR322. Cold Spring Harbor Symp Quant Biol 43:77–90
Szalay A, Munsche D, Wollgiehn R, Parthier B (1972) Ribosomal ribonucleic acid and ribosomal precursor ribonucleic acid in Anacystis nidulans. Biochem J 129:135–140
Takaiwa F, Sugiura M (1981) Heterogeneity of 5S RNA species in tobacco chloroplasts. Mol Gen Genet 182:385–389
Thomas M, White RL, Davis RW (1976) Hybridization of RNA to double-stranded DNA: Formation of R-loops. Proc Natl Acad Sci USA 73:2294–2298
Whitfeld PR, Herrmann RG, Bottomley W (1978) Mapping of the ribosomal RNA genes on spinach chloroplast DNA. Nucleic Acids Res 5:1741–1751
Young RA, Maklis R, Steitz JA (1979) Sequence of the 16S-23S spacer region in two ribosomal RNA operons of Escherichia coli. J Biol Chem 254:3264–3271
Author information
Authors and Affiliations
Additional information
Communicated by K. Isono
Rights and permissions
About this article
Cite this article
Tomioka, N., Shinozaki, K. & Sugiura, M. Molecular cloning and characterization of ribosomal RNA genes from a blue-green alga, Anacystis nidulans . Mol Gen Genet 184, 359–363 (1981). https://doi.org/10.1007/BF00352505
Received:
Issue Date:
DOI: https://doi.org/10.1007/BF00352505