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Chromosomal localization of Sau3A repetitive DNA revealed by in situ hybridization

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Abstract

The Sau3A DNA family consists of unique alphoid human repetitive DNA which is prone to be excised from the chromosomes and exhibits restriction fragment length polymorphism. We studied the chromosomal localization of the DNA by in situ hybridization using cultured normal human lymphocytes. Under standard hybridization conditions, the sequence hybridized with the centromeric regions of chromosomes 1, 2, 4, 11, 15, 17, 18, 19 and X, but under high stringency hybridization conditions, it hybridized with the centromeric regions of chromosomes 1, 17 and X, and particularly chromosome 11. Based on these results, we discuss the evolutionary relationship among the sequences of the Sau3A DNA family.

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References

  • Cremer T, Landegent J, Brückner A, Scholl HP, Schardin M, Hager HD, Devilee P, Pearson P, van der Ploeg M (1986) Detection of chromosome aberrations in the human interphase nucleus by visualization of specific target DNAs with radioactive and non-radioactive in situ hybridization techniques: diagnosis of trisomy 18 with probe L1.84. Hum Genet 74:346–352

    Google Scholar 

  • Devilee P, Cremer T, Slagboom P, Bakker E, Scholl HP, Hager HD, Stevenson AFG, Cornelisse CJ, Pearson PL (1986) Two subsets of human alphoid repetitive DNA show distinct preferential localization of the pericentric regions of chromosomes 13, 18, and 21. Cytogenet Cell Genet 41:193–201

    Google Scholar 

  • Harper ME, Saunders GF (1981) Localization of single copy DNA sequences on G-banded human chromosomes by in situ hybridization. Chromosoma 83:431–439

    Google Scholar 

  • Kanda N, Schreck RR, Alt FW, Bruns G, Baltimore D, Latt SA (1983) Isolation of amplified DNA sequence from IMR-32 human neuroblastoma cells: facilitation by fluorescence-activated flow sorting of metaphase chromosomes. Proc Natl Acad Sci USA 80:4069–4073

    Google Scholar 

  • Kiyama R, Matsui H, Oishi M (1986) A repetitive DNA family (Sau3A family) in human chromosomes: Extrachromosomal DNA and DNA polymorphism. Proc Natl Acad Sci USA 83:4665–4669

    Google Scholar 

  • Kiyama R, Matsui H, Okumura K, Oishi M (1987a) A group of repetitive human DNA families that is characterized by extrachromosomal oligomers and restriction-fragment length polymorphism. J Mol Biol 193:591–597

    Google Scholar 

  • Kiyama R, Okumura K, Matsui H, Bruns GAP, Kanda N, Oishi M (1987b) Nature of recombination involved in excision and rearrangement of human repetitive DNA. J Mol Biol 198:589–598

    Google Scholar 

  • Lin CC, Alitalo K, Schwab M, George D, Varmus HE, Bishop JM (1985) Evolution of karyotypic abnormalities and c-myc oncogene amplification in human colonic carcinoma cell lines. Chromosoma 92:11–15

    Google Scholar 

  • McDermid HE, Duncan AMV, Higgins MJ, Hamerton JL, Rector E, Brasch KR, White BN (1986) Isolation and characterization of an α-satellite repeated sequence from human chromosome 22. Chromosoma 94:228–234

    Google Scholar 

  • Miklos GLG (1985) Localized highly repetitive DNA sequences in vertebrate and invertebrate genome. In: McIntyre JR (ed) Molecular evolutionary genetics. Plenum Press, New York, pp 241–321

    Google Scholar 

  • Rigby PW, Dieckmann M, Rhodes C, Berg P (1977) Labelling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I. J Mol Biol 113:237–251

    Google Scholar 

  • Singer M (1982) Highly repeated sequences in mammalian genomes. Int Rev Cytol 76:67–112

    Google Scholar 

  • Waye JS, Creeper LA, Willard HF (1987) Organization and evolution of alpha satellite DNA from human chromosome 11. Chromosoma 95:182–188

    Google Scholar 

  • Willard HF (1985) Chromosome-specific organization of human alpha satellite DNA. Am J Hum Genet 37:524–532

    Google Scholar 

  • Willard HF, Waye JS (1987) Chromosome-specific subsets of human alpha satellite DNA: analysis of sequence divergence within and between chromosomal subsets and evidence for an ancestral pentameric repeat. J Mol Evol 25:207–214

    Google Scholar 

  • Wolfe J, Darling SM, Erickson RP, Craig IW, Buckle VJ, Rigby PWJ, Willard HF, Goodfellow PN (1985) Isolation and characterization of an alphoid centromeric repeat family from the human Y chromosome. J Mol Biol 182:477–485

    Google Scholar 

  • Yang TP, Hansen SK, Oishi KK, Ryder OA, Hamkalo BA (1982) Characterization of a cloned repetitive DNA sequence concentrated on the human X chromosome. Proc Natl Acad Sci USA 79:6593–6597

    Google Scholar 

  • Yurov YB, Mitkevich SP, Alexandrov IA (1987) Application of cloned satellite DNA sequences to molecular-cytogenetic analysis of constitutive heterochromatin heteromorphisms in man. Hum Genet 76:157–164

    Google Scholar 

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Kiyama, R., Oishi, M. & Kanda, N. Chromosomal localization of Sau3A repetitive DNA revealed by in situ hybridization. Chromosoma 96, 372–375 (1988). https://doi.org/10.1007/BF00330704

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