Skip to main content
Log in

Nitrate reductase induction and molecular characterization in rice (Oryza sativa L.)

  • Published:
Molecular and General Genetics MGG Aims and scope Submit manuscript

Summary

Barley nitrate reductase cDNA clone bNRp10 was used as a hybridization probe to screen a genomic DNA library of rice (Oryza sativa L.) cultivar M201. Two different lambda clones were isolated, subcloned to plasmids, and partially characterized. The subclone pHBH1 was tentatively identified as encoding a NADH nitrate reductase. Southern and dot blot analysis suggest that, in rice, nitrate reductase is encoded by a small gene family. Regulation of NADH nitrate reductase was investigated in rice cultivars Labelle and M201 representing the subspecies indica and japonica, respectively. In the absence of nitrate, only trace levels of nitrate reductase activity and mRNA were detected in seedling leaves. Upon addition of nitrate to seedling roots, nitrate reductase activity and mRNA increased rapidly in leaves. Nitrate reductase activity continued to increase over a 24 h period, but the mRNA accumulation peaked at about 6 h and then declined. Western blot analysis with a barley NADH nitrate reductase antiserum showed the presence of two bands of approximately 115 and 105 kDa. These protein bands were not detected in extracts of tissue grown in the absence of nitrate.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Beevers L, Hageman RH (1969) Nitrate reduction in higher plants. Annu Rev Plant Physiol 20:495–522

    Google Scholar 

  • Beltz GA, Jacobs KA, Eickbush TH, Cherbas PT, Kafatos F (1983) Isolation of multigene families and determination of homologies by filter hybridization methods. Methods Enzymol 100:266–285

    Google Scholar 

  • Calza R, Huttner E, Vincentz M, Rouze P, Galangau F, Vaucheret H, Cherel I, Meyer C, Kronenberger J, Caboche M (1987) Cloning of DNA fragments complementary to tobacco nitrate reductase mRNA and encoding epitopes common to the nitrate reductases from higher plants. Mol Gen Genet 209:552–562

    Google Scholar 

  • Campbell WH, Remmler JL (1986) Regulation of corn leaf nitrate reductase. I. Immunochemical methods for analysis of the enzyme protein components. Plant Physiol 80:435–441

    Google Scholar 

  • Cheng CL, Dewdney J, Kleinhofs A, Goodman HM (1986) Cloning and nitrate induction of nitrate reductase mRNA. Proc Natl Acad Sci USA 83:6825–6828

    Google Scholar 

  • Cheng CL, Dewdney J, Nam HG, den Boer BGW, Goodman HM (1988) A new locus (NIA1) in Arabidopsis thaliana encoding nitrate reductase. EMBO J 7:3309–3314

    Google Scholar 

  • Church GM, Gilbert W (1984) Genomic sequencing. Proc Natl Acad Sci USA 81:1991–1995

    Google Scholar 

  • Crawford NM, Campbell WH, Davis RW (1986) Nitrate reductase from squash: cDNA cloning and nitrate regulation. Proc Natl Acad Sci USA 83:8073–8076

    Google Scholar 

  • Crawford NM, Smith M, Bellissimo D, Davis RW (1988) Sequence and nitrate regulation of the Arabidopsis thaliana mRNA encoding nitrate reductase: A metalloflavoprotein with three functional domains. Proc Natl Acad Sci USA 85:5006–5010

    Google Scholar 

  • Dailey FA, Warner RL, Somers DA, Kleinhofs A (1982) Characterization of a nitrate reductase in a barley mutant deficient in NADH nitrate reductase. Plant Physiol 69:1200–1204

    Google Scholar 

  • Feinberg AP, Vogelstein B (1983) A technique for radiolabelling DNA restriction endonuclease fragments to high specific activity. Anal Biochem 132:6–13

    Google Scholar 

  • Feramisco JR, Smart JE, Burridge K, Helfman DM, Thomas GP (1982) Coexistence of vinculin and a vinculin-like protein of higher molecular weight in smooth muscle. J Biol Chem 257:1024–1031

    Google Scholar 

  • Hanahan D (1983) Studies on transformation of Escherichia coli with plasmids. J Mol Biol 166:557–580

    Google Scholar 

  • Harker AR, Narayanan KR, Warner RL, Kleinhofs A (1986) NAD(P)H bispecific nitrate reductase in barley leaves: Partial purification and characterization. Phytochemistry 25:1275–1279

    Google Scholar 

  • Hewitt EJ (1975) Assimilatory nitrate-nitrite reduction. Annu Rev Plant Physiol 26:73–100

    Google Scholar 

  • Iyengar GAS, Sen SK (1978) Nuclear DNA content of several wild and cultivated Oryza species. Environ Exp Bot 18:219–224

    Google Scholar 

  • Jones PW, Mhuimhneachain MN (1985) The activity and stability of wheat nitrate reductase in vitro. Phytochemistry 24:385–392

    Google Scholar 

  • Kafatos FC, Jones CW, Efstratiadis A (1979) Determination of nucleic acid sequence homologies and relative concentrations by a dot hybridization procedure. Nucleic Acids Res 7:1541–1552

    Google Scholar 

  • Kleinhofs A, Warner RL, Narayanan KR (1985) Current progress towards an understanding of the genetics and molecular biology of nitrate reductase in higher plants. Oxf Surv Plant Mol Cell Biol 2:91–121

    Google Scholar 

  • Kleinhofs A, Narayanan KR, Somers DA, Kuo TM, Warner RL (1986) Immunochemical methods for higher plant nitrate reductase. In: Linskens H-F, Jackson JF (eds) Modern methods of plant analysis, new series, vol 4. Springer, Berlin Heidelberg New York, pp 190–211

    Google Scholar 

  • Kleinhofs A, Warner RL, Melzer JM (1989) Genetics and molecular biology of higher plant nitrate reductases. In: Conn EE (ed) Plant nitrogen metabolism, Plenum, New York (in press)

    Google Scholar 

  • Kuo TM, Kleinhofs A, Warner RL (1980) Purification and partial characterization of nitrate reductase from barley leaves. Plant Sci Lett 17:371–381

    Google Scholar 

  • Kuo TM, Somers DA, Kleinhofs A, Warner RL (1982) NADH-nitrate reductase in barley leaves. Identification and amino acid composition of subunit protein. Biochim Biophys Acta 708:75–81

    Google Scholar 

  • Lin Z, Tang Y (1989) Regulation of nitrate reductase activity in rice. Sci Sin [B] 31:1195

    Google Scholar 

  • Loenen WAM, Blattner FR (1983) Lambda Charon vectors (Ch32, 33, 34, and 35) adapted for DNA cloning in recombination-deficient hosts. Gene 26:171–179

    Google Scholar 

  • Malavolta E (1954) Study of nitrogenous nutrition of rice. Plant Physiol 29:98–99

    Google Scholar 

  • Maniatis T, Fritsch EF, Sambrook J (1982) Molecular cloning: A laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, p 200

    Google Scholar 

  • Mendel RR, Müller AJ (1980) Comparative characterisation of nitrate reductase from wild-type and molybdenum cofactordefective cell cultures of Nicotiana tabacum. Plant Sci Lett 18:277–288

    Google Scholar 

  • Misra BB, Behera PK, Tripathy PC (1980) Comparative studies on nitrate uptake and nitrate reductase in root and shoot of rice seedlings (Oryza sativa L.) induced by nitrate. Indian J Plant Physiol 23:97–102

    Google Scholar 

  • Murray MG, Thompson WF (1980) Rapid isolation of high molecular weight plant DNA. Nucleic Acids Res 8:4321–4325

    Google Scholar 

  • Notton BA, Hewitt EJ (1979) Structure and properties of higher plant nitrate reductase, especially Spinacea oleracea. In: Hewitt EJ, Cutting CV (eds) Nitrogen assimilation in plants. Academic Press, New York, pp 227–244

    Google Scholar 

  • Oji Y, Izawa G (1968) Utilization of nitrate nitrogen in higher plants. The inducibility of NADH: nitrate oxidoreductase and the enzyme activity affected by leaf position in rice plants. J Sci Soil Manure 39:380–386

    Google Scholar 

  • Patrick WH, Mahapatra IC (1968) Transformation and availability to rice of nitrogen and phosphorous in waterlogged soils. Adv Agron 20:323–359

    Google Scholar 

  • Puhler A (1984) Gene cloning with bacteriophage lambda. In: Puhler A, Timmis TM (eds) Advanced molecular genetics. Springer, Berlin Heidelberg New York Tokyo, pp 176–189

    Google Scholar 

  • Redinbaugh MG, Campbell WH (1981) Purification and characterization of NAD(P)H: nitrate reductase and NADH: nitrate reductase from corn roots. Plant Physiol 68:115–120

    Google Scholar 

  • Sasakawa H, Yamamoto Y (1978) Comparison of the uptake of nitrate and ammonium by rice seedlings. Influence of light, temperature, oxygen concentration, exogenous sucrose, and metabolic inhibitors. Plant Physiol 62:665–669

    Google Scholar 

  • Shen TC (1969) Induction of nitrate reductase and the preferential assimilation of ammonium in germinating rice seedlings. Plant Physiol 44:1650–1655

    Google Scholar 

  • Shen TC, Funkhouser EA, Guerrero MG (1976) NADH- and NAD(P)H-nitrate reductases in rice seedlings. Plant Physiol 58:292–294

    Google Scholar 

  • Somers DA, Kuo TM, Kleinhofs A, Warner RL (1983) Synthesis and degradation of barley nitrate reductase. Plant Physiol 72:949–952

    Google Scholar 

  • Ta TC, Ohira K (1982) Comparison of the uptake and assimilation of ammonium and nitrate in Indica and Japonica rice plants using the tracer 15N method. Soil Sci Plant Nutr 28:79–90

    Google Scholar 

  • Tang PS, Wu HY (1957) Adaptive formation of nitrate reductase in rice seedlings. Nature 179:1355–1356

    Google Scholar 

  • Thomas PS (1980) Hybridization of denatured RNA and small DNA fragments transferred to nitrocellulose. Proc Natl Acad Sci USA 77:5201–5205

    Google Scholar 

  • Thomas PS (1983) Hybridization of denatured RNA transferred or dotted to nitrocellulose paper. Methods Enzymol 100:255–266

    Google Scholar 

  • Wagoner W, Loschke DC, Hadwiger LA (1982) Two-dimensional electrophoretic analysis of in vivo and in vitro synthesis of proteins in peas inoculated with compatible and incompatible Fusarium solani. Physiol Plant Pathol 20:99–107

    Google Scholar 

  • Warner RL, Kleinhofs A (1981) Nitrate utilization by nitrate reductase-deficient barley mutants. Plant Physiol 67:740–743

    Google Scholar 

  • Wood WB (1966) Host specificity of DNA produced by Escherichia coli: bacterial mutations affecting the restriction and modification of DNA. J Mol Biol 16:118–133

    Google Scholar 

  • Wray JL, Kinghorn JR, eds (1989) Molecular and genetic aspects of nitrogen assimilation. Oxford University Press, Oxford (in press)

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Additional information

Communicated by H. Böhme

Rights and permissions

Reprints and permissions

About this article

Cite this article

Hamat, H.B., Kleinhofs, A. & Warner, R.L. Nitrate reductase induction and molecular characterization in rice (Oryza sativa L.). Mol Gen Genet 218, 93–98 (1989). https://doi.org/10.1007/BF00330570

Download citation

  • Received:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00330570

Key words

Navigation