Abstract
The transcript of in situ RNA synthesis using Peromyscus eremicus cells, which had been treated with HCl followed by NaOH, proved to be rich in heterochromatin specifying sequences. Such transcript, referred to as heterochromatin RNA, can be characterized biochemically to probe the organization of heterochromatin DNA. It was found that the heterochromatin RNA of P. eremicus contained non-repetitive sequences covalently linked to repetitive sequences.
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Arrighi, F.E., Hsu, T.C.: Localization of heterochromatin in human chromosomes. Cytogenet. 10, 81–86 (1971)
Comings, D.E., Avelino, E., Okada, T.A., Wyandt, H.E.: The mechanism of C- and G-banding of chromosomes. Exp. Cell Res. 77, 469–493 (1973)
Crain, W.R., Davidson, E.H., Britten, R.J.: Contrasting patterns of DNA sequences arrangement in Apis mellifera (honeybee) and Musca domestica (housefly). Chromosoma 59, 1–12 (1976)
Deaven, L.L., Vidal-Rioja, L., Jett, J.H., Hsu, T.C.: Chromosomes of Peromyscus (Rodentia, Cricetidae) VI. The genome size. Cytogenet. Cell Genet. (in press)
Galau, G.A., Smith, M.J., Britten, R.J., Davidson, E.H.: Studies on nucleic acid reassociation kinetics: Retarded rate of hybridization of RNA with excess DNA. Proc. nat. Acad. Sci. (Wash.) 74, 2306–2310 (1977)
Goldberg, R.B., Crain, W.R., Ruderman, J.V., Moore, G.P., Barnett, T.R., Higgins, R.C., Gelfand, R.A., Galau, G.A., Britten, R.J., Davidson, E.H.: DNA sequence organization in the genomes of five marine invertebrates. Chromosoma (Berl.) 51, 225–251 (1975)
Hough, B.R., Davidson, E.H.: Studies on the repetitive sequence transcripts of Xenopus oocytes. J. molec. Biol. 70, 491–509 (1972)
Klein, W.H., Murphy, W., Attardi, G., Britten, R.J., Davidson, E.H.: Distribution of repetitive and non-repetitive sequence transcripts in HeLa mRNA. Proc. nat. Acad. Sci. (Wash.) 71, 1785–1789 (1974)
Krieg, P., Wells, J.R.E.: The distribution of active genes (globin) and inactive genes (keratin) in fractionated chicken erythroid chromatin. Biochemistry 15, 4549–4558 (1976)
Kuo, M.T., Hsu, T.C., Saunders, G.F.: In situ RNA synthesis in fixed mammalian chromosomes. Exp. Cell Res. 88, 424–427 (1974)
Kuo, M.T., Saunders, G.F.: Localization of messenger specifying sequences in mammalian chromosomes. Chromosoma (Berl.) 63, 241–252 (1977)
Marmur, J.: A procedure for the isolation of deoxyribonucleic acid from micro-organisms. J. molec. Biol. 3, 208–218 (1961)
Pardue, M.L., Gerbi, S.A., Eckhardt, R.A., Gall, J.G.: Cytological localization of DNA complementary to ribosomal RNA in polytene chromosomes of Diptera. Chromosoma (Berl.) 29, 268–290 (1970)
Pathak, S., Arrighi, F.E.: Loss of DNA following C-band procedures. Cytogenet. Cell Genet. 12, 414–422 (1973)
Pathak, S., Hsu, T.C., Arrighi, F.E.: Chromosomes of Peromyscus (Rodentia: Cricetidae). IV. The role of heterochromatin in karyotypic evolution. Cytogenet. Cell Genet. 12, 315–326 (1973)
Saunders, G.F., Shirakawa, S., Saunders, P.P., Arrighi, F.E., Hsu, T.C.: Populations of repeated DNA sequences in human genome. J. molec. Biol. 63, 323–334 (1972)
Sedman, M.M., Cole, R.D.: Chromatin fractionation related to cell type and chromosome condensation but perhaps not to transcriptional activity. J. biol. Chem. 252, 2630–2639 (1977)
Watt Hazen, M., Arrighi, F.E., Johnston, D.A.: Chromosomes of Peromyscus (Rodentia, Cricetidae) VIII Genome characterization of four species. Chromosomes today (in press, 1978)
Watt Hazen, M., Kuo, M.T., Arrighi, F.E.: Genome analysis of Peromyscus (Rodentia, Cricetidae) VII. Localization of satellite DNA sequences and poly (A) RNA sequences of P. eremicus on metaphase chromosomes. Chromosoma (Berl.) 64, 133–142 (1977)
Woo, S.L.C., Rosen, J.M., Liarakos, C.D., Choi, Y.C., Busch, H., Means, A.R., O'Malley, B.W., Robberson, D.L.: Physical and chemical characterization of purified ovalbumin messenger RNA. J. biol. Chem. 250, 7027–7039 (1975)
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Kuo, M.T., Hsu, T.C. Studies in heterochromatin DNA: Characterization of transcripts synthesized in situ from C-banded preparations. Chromosoma 65, 325–334 (1978). https://doi.org/10.1007/BF00286412
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DOI: https://doi.org/10.1007/BF00286412