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Cloning and the nucleotide sequence of the genes for Escherichia coli ribosomal proteins L28 (rpmB) and L33 (rmpG)

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Summary

The specialized transducing bacteriophage λdpyrE DNA was used as a source of DNA to clone two ribosomal protein genes rpmB (L28) and rpmG (L33) on the cloning vehicle pACYC184. Using one of these plasmids, the nucleotide sequence of these two genes and their flanking regions were determined. The amino acid sequences of both proteins deduced from the nucleotide sequences match with the amino acid sequences previously determined, with one exception. The nucleotide sequences suggest that these two ribosomal protein genes are cotranstribed. There was no expression of the second gene of the operon, rpmG, in the absence of the 5′ sequences adjacent to the first gene, rmpB. Observation of the structure of mRNA also strongly supports the idea that rpmB and rpmG are in a single transcription unit whose order is: rpmBp-rpmB-rpmG-rpmGt.

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References

  • Adler HI, Fisher WD, Cohen A, Hardigree AA (1967) Miniature Escherichia coli cells deficient in DNA. Proc Natl Acad Sci USA 57:321–326

    Google Scholar 

  • An G, Friesen JD (1980) Characterization of promoter-cloning plasmids: Analysis of operon structure in the rif region of Escherichia coli and isolation of an enhanced internal promoter mutant. J Bacteriol 144:904–916

    Google Scholar 

  • An G, Justesen J, Watson RJ, Friesen JD (1979) Cloning the spoT gene of Escherichia coli; Identification of the spoT gene product. J Bacteriol 137:1100–1110

    Google Scholar 

  • Anderson EH (1946) Growth requirements of virus resistant E. coli strain B. Proc Natl Acad Sci USA 32:120–122

    Google Scholar 

  • Bachmann B, Low KB (1980) Linkage map of Escherichia coli K-12. Microbiol Rev 44:1–56

    Google Scholar 

  • Berk AJ, Sharp PA (1978) Spliced early mRNAs of simian virus 40. Proc Natl Acad Sci USA 75:1274–1278

    Google Scholar 

  • Bolivar F, Rodriguez RL, Greene PJ, Betlach MC, Heyneker HL, Boyer HW (1977) Construction and characterization of new cloning vehicles. II. A multipurpose cloning system. Gene 2:95–113

    Google Scholar 

  • Casadaban MJ, Cohen SN (1980) Analysis of gene control signals by DNA fusion and cloning in Escherichia coli. J Mol Biol 138:179–207

    Google Scholar 

  • Casey J, Davidson J (1976) Rates of formation and thermal stabilities of RNA:DNA and DNA:RNA duplexes at high concentrations of formamide. Nucl Acid Res 4:1539–1552

    Google Scholar 

  • Chang ACY, Cohen SN (1978) Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from P15A cryptic mini-plasmids. J Bacteriol 134:1141–1156

    Google Scholar 

  • Fiil NP, Willumsen BM, Friesen JD, Von Meyenburg K (1977) Interaction of alleles of the relA, relC, and spoT genes in Escherichia coli; Analysis of the interconversion of GTP, ppGpp and pppGpp. Mol Gen Genet 150:87–101

    Google Scholar 

  • Grantham R, Gautier C, Gouy M (1980) Codon frequencies in 119 individual genes confirm consistent choices of degenerate bases according to genome type. Nucl Acids Res 8:1893–1912

    Google Scholar 

  • Hardy SJS, Kurland CG, Voynow P, Mora G (1969) The ribosomal proteins of Escherichia coli. I. Purification of the 30S ribosomal proteins. Biochem 8:2897–2905

    Google Scholar 

  • Isono K, Schnier J, Kitakawa M (1980) Genetic fine structure of the pyrE region containing the genes for ribosomal proteins L28 and L33 in Escherichia coli. Mol Gen Genet 179:311–317

    Google Scholar 

  • Kaltschmidt E, Wittmann HG (1970) Ribosomal proteins. VII. Two dimensional polyacrylamide gel electrophoresis for fingerprinting of ribosomal proteins. Ann Biol Chem 36:401–412

    Google Scholar 

  • Kirschbaum JB, Konrad EB (1973) Isolation of a specialized transducing bacteriophage carrying the beta subunit gene for E. coli RNA polymerase. J Bacteriol 116:517–526

    Google Scholar 

  • Kitakawa M, Blumenthal L, Isono K (1980) Isolation and characterization of specialized transducing lambda phages carrying ribosomal protein genes of Escherichia coli. Mol Gen Genet 180:343–349

    Google Scholar 

  • Lennox ES (1955) Transduction of linked genetic characters of the host by bacteriophage Pl. Virology 1:190–206

    Google Scholar 

  • Mandel M, Higa A (1970) Calcium-dependent bacteriophage DNA infection. J Mol Biol 73:453–471

    Google Scholar 

  • Maniatis T, Jeffrey A, van de Sande H (1975) Chain length determination of small double and single-stranded DNA molecules by polyacrylamide gel electrophoresis. Biochem 14:3787–3794

    Google Scholar 

  • Manley JL, Sharp PA, Gefter ML (1979) RNA synthesis in isolated nuclei: In vitro initiation of adenovirus 2 major late mRNA precursor. Proc Natl Acad Sci USA 76:160–164

    Google Scholar 

  • Maxam AM, Gilbert W (1980) Sequencing end-labelled DNA with base-specific chemical cleavages. In: Meth Enzymol 65:499–560

    Google Scholar 

  • Miller JH (1972) Experiments in molecular genetics. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York

    Google Scholar 

  • Post LE, Nomura M (1980) DNA sequences the str operon of Escherichia coli. J Biol Chem 255:4660–4666

    Google Scholar 

  • Post LE, Arfsten AE, Davis GR, Nomura M (1980) DNA sequence of the promoter region for the α ribosomal operon in Escherichia coli. J Biol Chem 255:4653–4659

    Google Scholar 

  • Post LE, Arfsten AE, Reusser F, Nomura M (1978) DNA sequences of promoter regions for the str and spc ribosomal protein operons in E. coli. Cell 15:215–229

    Google Scholar 

  • Post LE, Strycharz GD, Nomura M, Lewis H, Dennis PP (1979) Nucleotide sequence of the ribosomal protein gene cluster adjacent to the gene for RNA polymerase beta in Escherichia coli. Proc Natl Acad Sci USA 76:1697–1901

    Google Scholar 

  • Pribnow D (1975) Nucleotide sequence of an RNA polymerase binding site at an early T7 promoter. Proc Natl Acad Sci USA 72:784–788

    Google Scholar 

  • Rosenberg M, Court D (1979) Regulatory sequence involved in the promotion and termination of RNA transcription. Annu Rev Genet 13:319–353

    Google Scholar 

  • Sancar A, Hack AM, Rupp D (1979) Single method for identification of plasmid-coded proteins. J Bacteriol 137:692–693

    Google Scholar 

  • Shinte J, Dalgarno L (1974) The 3′ terminal sequence of Escherichia coli 16S ribosomal RNA: Complementarity to nonsense triplets and ribosome binding sites. Proc Natl Acad Sci USA 71:1342–1346

    Google Scholar 

  • Travers AA (1980) Promoter sequence for stringent control of bacterial ribonucleic acid synthesis. J Bacteriol 141:973–976

    Google Scholar 

  • Wittmann-Liebold B, Marzinzig E (1977) Primary structure of protein L28 from the large subunit of Escherichia coli ribosomes. FEBS Lett 81:214–217

    Google Scholar 

  • Wittmann-Liebold B, Pannenbecker R (1976) Primary structure of proteins L33 from the large subunit of the Escherichia coli ribosome. FEBS Lett 68:115–118

    Google Scholar 

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Communicated by A. Böck

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Lee, J.S., An, G., Friesen, J.D. et al. Cloning and the nucleotide sequence of the genes for Escherichia coli ribosomal proteins L28 (rpmB) and L33 (rmpG). Molec. Gen. Genet. 184, 218–223 (1981). https://doi.org/10.1007/BF00272908

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  • DOI: https://doi.org/10.1007/BF00272908

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