Summary
Starting with an F′ episome harboring a transposon inserted in the pnp gene (Portier 1980), we were able to identify an EcoRI restriction fragment carrying the pnp and argG genes. This fragment, from both wild-type and mutant episomes, was cloned in pACYC184. The presence of argG on the fragment allowed positive selection of the desired clones in an auxotrophic strain (argG). A restriction map was established and a fragment of 3 megadaltons subcloned in the plasmid vector pBR322. The pnp gene corresponds to about 50% of this subcloned segment and was roughly located by deletion mapping. The direction of transcription and locations of the promotor and gene extremities were determined by analyzing proteins synthesized in “maxicells”. In addition, the gene coding for a 10,000 dalton protein was found to reside adjacent to the beginning of the pnp structural gene. Strains carrying plasmids which express the pnp overproduce polynucleotide phosphorylase.
Similar content being viewed by others
References
Bachmann BJ, Low KB, Taylor AL (1976) Recalibrated linkage map of Escherichia coli K-12. Bacteriol Rev 40:116–167
Barry G, Squires C, Squires C (1980) Attenuation and processing of RNA from rpl JL-rpo BC transcription unit of Escherichia coli. Proc Natl Acad Sci USA 77:3331–3335
Birnboim HC, Doly J (1979) A rapid alkaline extraction procedure for screening recombinant, plasmid DNA. Nucl Acids Res 7:1513–1523
Bolivar F, Rodriguez RL, Green PJ, Betlach MC, Heyneker HL, Boyer HW, Crosa JH, Falkow S (1977) Construction and characterization of new cloning vehicles. II A multi-purpose cloning system. Gene 2:95–113
Chang ACY, Cohen SN (1978) Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid. J Bacteriol 134:1141–1156
Cohen SN, Chang ACY, Hsu L (1972) Non chromosomal antibiotic resistance in bacteria: genetic transformation of Escherichia coli by R-factor DNA. Proc Natl Acad Sci USA 69:2110–2114
Davis BJ (1964) Disc electrophoresis. 2. Method and application to human serum proteins. Ann NY Acad Sci 121:404–427
Guissani A, Portier C (1976) Study on the structure-function relationship of polynucleotide phosphorylase: model of a proteolytic degraded polynucleotide phosphorylase. Nucl Acids Res 3:3015–3024
Har-El R, Silberstein A Kuhn J, Tal M (1979) Synthesis and degradation of lac mRNA in E. coli depleted of 30S ribosomal subunits. Mol Gen Genet 173:135–144
Hautala JA, Bassett CL, Giles NH, Kushner SR (1979) Increased expression of a eukaryotic gene in Escherichia coli through stabilization of its messenger RNA. Proc Natl Acad Sci USA 76:5774–5778
Jorgensen RA, Rothstein SJ, Reznikoff WS (1979) A restriction enzyme cleavage map of Tn5 and location of a region encoding neomycin resistance. Mol Gen Genet 177:65–72
Kasunic DA, Kushner SR (1980) Expression of the His3 gene of Saccharomyces cerevisiae in polynucleotide phosphorylase-deficient strains of Escherichia coli K-12. Gene, 12:1–10
Kitakawa M, Dabbs ER, Isono K (1979) Genes coding for ribosomal proteins S15, L21 and L27 map near argG in Escherichia coli. J Bacteriol 138:832–838
Klee CB (1969) The proteolytic conversion of polynucleotide phosphorylase to a primer-dependent form. J Biol Chem 244:2558–2566
Läemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680–685
Letendre CH, Singer MF (1975) Further characterization of the polynucleotide phosphorylase of Micrococcus luteus. Nucl Acids Res 2:149–163
Lin S, Zabin I (1972) β-galactosidase. Rates of synthesis and degradation of incomplete chains. J Biol Chem 247:2205–2211
Miller JH (1972) Experiments in molecular genetics. Cold Spring Harbor Laboratory, Cold Spring Harbor, New-York, p. 431
Miller JR, Kline BC (1979) Biochemical characterization of non integrated plasmid folded chromosome complex: Sex factor F and the Escherichia coli nucleoid. J Bacteriol 137:885–890
Morinaga T, Funatsu G, Funatsu M, Wittmann HG (1976) Primary structure of the 16S rRNA binding protein S15 from Escherichia coli ribosomes. FEBS Lett 64:307–309
Pedersen S, Reeh S (1978) Functional mRNA half lives in Escherichia coli. Mol Gen Genet 166:329–336
Portier C (1975) Quaternary structure of polynucleotide phosphorylase from Escherichia coli: evidence of a complex between two types of polypeptide chains. Eur J Biochem 55:573–582
Portier C (1980) Isolation of a polynucleotide phosphorylase mutant using a kanamycin resistant determinant. Mol Genet 178:343–349
Reiner A (1969a) Isolation and mapping of polynucleotide phosphorylase mutants of Escherichia coli. J Bacteriol 97:1431–1436
Reiner A (1969b) Characterization of polynucleotide phosphorylase mutants of Escherichia coli. J Bacteriol 97: 1437–1443
Sancar A, Hack AM, Rupp WD (1979) Simple method for identification of plasmid coded proteins. J Bacteriol 137:692–693
Sutcliffe JG (1979) Complete nucleotide sequence of the Escherichia coli plasmid pBR322. Cold Spring Harbor Symp Quant Biol 43:77–90
Takata R (1978) Genetic studies of the ribosomal proteins in Escherichia coli. XI Mapping of the genes for L21, L27, S15 and S21 by using hybrid bacteria and overproduction of these proteins in the merodiploïd strains. Mol Gen Genet 160:151–155
Thang MN, Dondon, L, Godefroy-Colburn T (1971) Degradation of Eschrichia coli polynucleotide phosphorylase by E. coli endogenous proteases and by trypsin. Biochimie 53:291–302
Thang MN, Thang DC, Léautey J (1967) Séparation et identification de polynucleotide phosphorylase par électrophorèse sur gel de polyacrylamide. CR Acad Sci Paris 265:1823–1826
Thompson R, Achtman M (1979) The control region of the F sex factor DNA transfer cistrons: physical mapping by deletion analysis. Mol Gen Genet 169:49–57
Thompson R, Hugues SG, Broda P (1974) Plasmid identification using specific endonucleases Mol Gen Genet 133:141–149
Yamamoto T, Yokota T (1980) Construction of a physical map of a kanamycin (Km) transposon, Tn5, and a comparison to another Km transposon, Tn903. Mol Gen Genet 178:77–83
Author information
Authors and Affiliations
Additional information
Communicated by K. Isono
Rights and permissions
About this article
Cite this article
Portier, C., Migot, C. & Grunberg-Manago, M. Cloning of E. coli pnp gene from an episome. Molec. Gen. Genet. 183, 298–305 (1981). https://doi.org/10.1007/BF00270632
Received:
Issue Date:
DOI: https://doi.org/10.1007/BF00270632