Skip to main content
Log in

Structural features of the plastid ribosomal RNA operons of two red algae: Antithamnion sp. and Cyanidium caldarium

  • Published:
Plant Molecular Biology Aims and scope Submit manuscript

Abstract

The nucleotide sequences of the plastid 16S rDNA of the multicellular red alga Antithamnion sp. and the 16S rDNA/23S rDNA intergenic spacers of the plastid DNAs of the unicellular red alga Cyanidium caldarium and of Antithamnion sp. were determined. Sequence comparisons support the idea of a polyphyletic origin of the red algal and the higher-plant chloroplasts. Both spacer regions include the unsplit tRNAIle (GAU) and tRNAAla (UGC) genes and so the plastids of both algae form a homogeneous group with those of chromophytic algae and Cyanophora paradoxa characterized by ‘small-sized’ rDNA spacers in contrast to green algae and higher plants. Nevertheless, remarkable sequence differences within the rRNA and the tRNA genes give the plastids of Cyanidium caldarium a rather isolated position.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Allen MB: Studies with Cyanidium caldarium, an anomalously pigmented chlorophyte. Arch Microbiol 32: 270–277 (1959).

    Google Scholar 

  2. Delaney TP, Cattolico RA: Chloroplast ribosomal DNA organization in the chromophytic alga Olisthodiscus luteus, Curr Genet 15: 221–229 (1989).

    PubMed  Google Scholar 

  3. Douglas SE: Physical mapping of the plastid genome from the chlorophyll c-containing alga, Cryptomonas Ø. Curr Genet 14: 591–598 (1988).

    Google Scholar 

  4. Dron M, Rahire M, Rochaix JD: Sequence of the chloroplast 16S rRNA gene and its surrounding regions of Chlamydomonas reinhardtii. Nucl Acids Res 10: 7609–7620 (1982).

    PubMed  Google Scholar 

  5. Gibbs SP: The chloroplasts of some algal groups may have evolved from endosymbiotic eucaryotic algae. Ann N.Y. Acad Sci 361: 193–208 (1981).

    PubMed  Google Scholar 

  6. Graf L, Kössel H, Stutz E: Sequence of 16S-23S spacer in a ribosomal RNA operon of Euglena gracilis chloroplast DNA reveals two tRNA genes. Nature 286: 908–910 (1980).

    PubMed  Google Scholar 

  7. Higgins DG, Sharp PM: A package for performing multiple sequence alignments on a microcomputer. Gene 73: 237–244 (1988).

    Article  PubMed  Google Scholar 

  8. Janssen I, Mucke H, Löffelhardt W, Bohnert HJ: The central part of the cyanelle rDNA unit of Cyanophora paradoxa: Sequence comparison with chloroplasts and cyanobacteria. Plant Mol Biol 9: 479–484 (1987).

    Google Scholar 

  9. Kostrzewa M, Valentin K, Maid U, Radetzky R, Zetsche K: Structure of the Rubisco-operon from the multicellular red alga Antithamnion spec. Curr Genet 18: 465–469.

  10. Kröger M, Kröger-Block A: Extensiom of a flexible computer program for handling DNA sequence data. Nucl Acids Res 12: 113–123.

  11. Loughney K, Lund E, Dahlberg JE: tRNA genes are found between the 16S and 23S rRNA genes in Bacillus. Nucl Acids Res 10: 1607–1624 (1982).

    PubMed  Google Scholar 

  12. Maid U, Valentin K, Zetsche K: The psbA-gene from a red alga resembles those from Cyanobacteria and Cyanelles. Curr Genet 17: 255–259 (1990).

    PubMed  Google Scholar 

  13. Maid U, Zetsche K: Nucleotide sequence of the plastid 16S rRNA of the red alga Cyanidium caldarium. Nucl Acids Res 18: 3996 (1990).

    PubMed  Google Scholar 

  14. Manhart JR, Palmer JD: The gain of two chloroplast tRNA introns marks the green algal ancestors of land plants. Nature 345: 268–270 (1990).

    Article  PubMed  Google Scholar 

  15. Markowicz Y, Mache R, Loiseaux-De Goer S: Sequence of the plastid rDNA spacer region of the brown alga Pylaiella littorals (L.) Kjellm. Evolutionary significance. Plant Mol Biol 10: 465–469 (1988).

    Google Scholar 

  16. Ohyama K, Fukuzawa H, Kohchi T, Shirai H, Sano T, Sano S, Umesono K, Shiki Y, Takeuchi M, Chang Z, Aota S, Inokuchi H, Ozeke H: Chloroplast gene organization deduced from complete sequence of leverwort Marchantia polymorpha chloroplast DNA. Nature 322: 572–574 (1986).

    Google Scholar 

  17. Sanger F, Nicklen S, Coulson AR: DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 74: 5463–5467 (1977).

    PubMed  Google Scholar 

  18. Schwarz Z, Kössel H: The primary structure of 16S rDNA from Zea mays chloroplast is homologous to E. coli 16S rRNA. Nature 283: 739–742 (1980).

    Google Scholar 

  19. Tohdoh N, Sugiura M: The complete nucleotide sequence of a 16S ribosomal RNA gene from tobacco chloroplasts. Gene 17: 213–218 (1982).

    Article  PubMed  Google Scholar 

  20. Valentin K, Zetsche K: The genes of both subunits of ribulose-1,5-bisphosphate-carboxylase constitute an operon on the plastom of a red alga. Curr Genet 16: 203–209 (1989).

    PubMed  Google Scholar 

  21. Valentin K, Zetsche K: Structure of the Rubisco operon from the unicellular red alga Cyanidium caldarium: Evidence for a polyphyletic origin of the plastids. Mol Gen Genet 222: 425–430 (1990).

    PubMed  Google Scholar 

  22. Valentin K, Zetsche K: Rubisco genes indicate a close phylogenetic relationship between the plastids of Chromophyta and Rhodophyta. Plant Mol Biol 15: 575–584 (1990).

    PubMed  Google Scholar 

  23. Van den Eynde H, De Baere R, De Roeck E, Van de Peer Y, Vandenberghe A, Willekens P, De Wachter R: The 5S ribosomal RNA sequences of a red algal rhodoplast and a gymnosperm chloroplast. Implications for the evolutions of plastids and Cyanobacteria. J Mol Evol 27: 126–132 (1988).

    PubMed  Google Scholar 

  24. Weisburg WG, Woese CR, Dobson ME, Weiss E: A common origin of rickettsiae and certain plant pathogens. Science 230: 556–558 (1985).

    PubMed  Google Scholar 

  25. Williamson SE, Doolittle WF: Genes for tRNAIle and tRNAAla in the spacer between the 16S and 23S rRNA genes of a bluegreen alga: strong homology to chloroplast tRNA genes and tRNA genes of the E. coli rrnD gene cluster. Nucl Acids Res 11: 225–235 (1983).

    PubMed  Google Scholar 

  26. Yamada T, Shimaji M: Peculiar feature of the organization of rRNA genes of the Chlorella chloroplast DNA. Nucl Acids Res 14: 3827–3839 (1986).

    PubMed  Google Scholar 

  27. Yamada T: Nucleotide sequence of the chloroplast 16S rRNA gene from the unicellular green alga Chlorella ellopsoidea. Nucl Acids Res 16: 9865 (1988).

    PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Maid, U., Zetsche, K. Structural features of the plastid ribosomal RNA operons of two red algae: Antithamnion sp. and Cyanidium caldarium . Plant Mol Biol 16, 537–546 (1991). https://doi.org/10.1007/BF00023420

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00023420

Key words

Navigation