Skip to main content
Log in

Octopine and nopaline strains of Agrobacterium tumefaciens differ in virulence; molecular characterization of the virF locus

  • Published:
Plant Molecular Biology Aims and scope Submit manuscript

Abstract

Octopine and nopaline strains of Agrobacterium tumefaciens were found to differ in virulence on Nicotiana glauca. This difference is due to the absence of a functional virF locus, which is necessary for efficient tumorigenesis on N. glauca, from the nopaline Ti plasmids. Genetic studies and DNA sequence analysis of the virF locus revealed that virF embraces one open reading frame coding for a hydrophilic protein with a molecular mass of 22437 Da. Transcription of virF is directed from left to right, towards the T region, and is strongly induced by the phenolic compound acetosyringone. We established that virA and virG, two genes known to be essential for induction of the vir regulon, are necessary for acetosyringoneinduced virF expression, implying that virF is a member of this vir regulon. Agrobacterium virF mutants can be complemented for tumor induction by co-infection with avirulent Agrobacterium ‘helper’ strains. We found that such ‘helper’ strains must express not only the virF gene but also the vir operons virA, virB, virD and virG.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  1. Koukolikova-Nicola Z, Albright L, Hohn B: The mechanism of T-DNA transfer from Agrobacterium tumefaciens to the plant cell. In: Hohn T, Schell J (eds), Plant-DNA Infectious Agents, pp. 109–148. Vienna: Springer Verlag (1987).

    Google Scholar 

  2. Melchers LS, Hooykaas PJJ: Virulence of Agrobacterium. In: Miflin BJ (ed), Oxford Surveys of Plant Molecular and Cell Biology, pp. 167–220. Oxford: Oxford University Press (1987).

    Google Scholar 

  3. Klee HJ, White FF, Iyer VN, Gordon MP, Nester EW: Mutational analysis of the virulence region of an Agrobacterium tumefaciens Ti-plasmid. J Bacteriol 153: 878–883 (1983).

    PubMed  Google Scholar 

  4. Hille J, VanKan J, Schilperoort RA: Trans-acting virulence functions of the octopine Ti plasmid from Agrobacterium tumefaciens. J Bacteriol 158: 754–756 (1984).

    PubMed  Google Scholar 

  5. Hooykaas PJJ, Hofker M, DenDulk-Ras H, Schilperoort RA: A comparison of virulence determinants in an octopine Ti plasmid, a nopaline Ti plasmid, and an Ri plasmid by complementation analysis of Agrobacterium tumefaciens mutants. Plasmid 11: 195–205 (1984).

    PubMed  Google Scholar 

  6. Stachel SE, Nester EW: The genetic and transcriptional organization of the vir region of the A6 Ti plasmid of Agrobacterium tumefaciens. EMBO J 5: 1445–1454 (1986).

    PubMed  Google Scholar 

  7. Stachel SE, Zambryski PC: virA and virG control the plant-induced activation of the T-DNA transfer process of Agrobacterium tumefaciens. Cell 46: 325–333 (1986).

    Article  PubMed  Google Scholar 

  8. Winans SC, Kerstetter RA, Nester EW: Transcriptional regulation of the virA and virG gnes of Agrobacterium tumefaciens. J Bacteriol 170: 4047–4054 (1988).

    PubMed  Google Scholar 

  9. Stachel SE, Messens E, VanMontagu M, Zambryski P: Identification of the signal molecules produced by wounded plant cell that activate T-DNA transfer in Agrobacterium tumefaciens. Nature 318: 624–629 (1985).

    Google Scholar 

  10. Leroux B, Yanofsky MF, Winans SC, Ward JE, Ziegler SF, Nester EW: Characterization of the virA locus of Agrobacterium tumefaciens a transcriptional regulator and host range determinant. EMBO J 6: 849–856 (1987).

    PubMed  Google Scholar 

  11. Melchers LS, Thompson DV, Idler KB, Neuteboom STC, DeMaagd RA, Schilperoort RA, Hooykaas PJJ: Molecular characterization of the virulence gene virA of the Agrobacterium tumefaciens octopine Ti plasmid. Plant Mol Biol 9: 635–645 (1987).

    Google Scholar 

  12. Melchers LS, Thompson DV, Idler KB, Schilperoort RA, Hooykaas PJJ: Nucleotide sequence of the virulence gene virG of the Agrobacterium tumefaciens octopine Ti plasmid: significant homology between virG and the regulatory genes ompR, phoB and dye of E. coli. Nucleic Acids Res 14: 9933–9942 (1986).

    PubMed  Google Scholar 

  13. Winans SC, Ebert PR, Stachel SE, Gordon MP, Nester EW: A gene for Agrobacterium virulence homologous to a family of positive regulatory loci. Proc Natl Acad Sci USA 83: 8278–8282 (1986).

    PubMed  Google Scholar 

  14. Stachel SE, Timmerman B, Zambryski P: Activation of Agrobacterium tumefaciens vir gene expression generates multiple single-stranded T-strand molecules from the pTiA6 T-region: requirement for 5′ virD gene products. EMBO J 6: 857–863 (1987).

    PubMed  Google Scholar 

  15. Young C, Nester EW: Association of the VirD2 protein with the 5′ end of T strands in Agrobacterium tumefaciens. J Bacteriol 170: 3367–3374 (1988).

    PubMed  Google Scholar 

  16. Gietl C, Koukolikova-Nicola Z, Hohn B: Mobilization of T-DNA from Agrobacterium to plant cells involves a protein that binds single-stranded DNA. Proc Natl Acad Sci USA 84: 9006–9010 (1987).

    PubMed  Google Scholar 

  17. Thompson DV, Melchers LS, Idler KB, Schilperoort RA, Hooykaas PJJ: Analysis of the complete nucleotide sequence of the Agrobacterium tumefaciens virB operon. Nucleic Acids Res 16: 4621–4636 (1988).

    PubMed  Google Scholar 

  18. Otten LABM, DeGreve H, Leemans J, Hain R, Hooykaas PJJ, Schell J: Restoration of virulence of vir region mutants of Agrobacterium tumefaciens strain B6S3 by coinfection with normal and mutant Agrobacterium strains. Mol Gen Genet 195: 159–163 (1984).

    Article  Google Scholar 

  19. Otten LABM, Piotrowiak G, Hooykaas PJJ, Dubois M, Szegedi E, Schell J: Identification of an Agrobacterium tumefaciens pTiB6S3 vir region fragment that enhances the virulence of pTiC58. Mol Gen Genet 199: 189–193 (1985).

    Article  Google Scholar 

  20. Hooykaas PJJ, Roobol C, Schilperoort RA: Regulation of the transfer of Ti plasmids of Abgrobacterium tumefaciens. J Gen Microbiol 110: 99–109 (1979).

    Google Scholar 

  21. Koekman BP, Hooykaas PJJ, Schilperoort RA: Localization of the replication control region on the physical map of the octopine Ti plasmid. Plasmid 4: 184–195 (1980).

    PubMed  Google Scholar 

  22. Birnboim HC, Doly J: A rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nucleic Acids Res 7: 1513–1523 (1979).

    PubMed  Google Scholar 

  23. Maniatis T, Fritsch EF, Sambrook J: Molecular cloning: a laboratory manual. Cold Spring Harbor Lab. (1982).

  24. Spaink HP, Okker RJH, Wijffelman CA, Pees E, Lugtenberg BJJ: Promoters in the nodulation region of the Rhizobium leguminosarum Sym plasmid pRL1JI. Plant Mol Biol 9: 27–39 (1987).

    Google Scholar 

  25. Stachel SE, An G, Flores C, Nester EW: A Tn3 lacZ transposon for the random generation of β-galactosidase gene fusions: application to the analysis of gene expression in Agrobacterium. EMBO J 4: 891–898 (1985).

    PubMed  Google Scholar 

  26. Melchers LS: Plant tumour induction. Genetic and functional analysis of the Agrobacterium tumefaciens virulence genes. Leiden: Thesis, Leiden University, Netherlands (1989).

  27. Melchers LS, Regensburg-Tuïnk AJG, Schilperoort RA, Hooykaas PJJ: Specificity of signal molecules in the activation of Agrobacterium virulence gene expression. Mol Microbiol 3: 969–977 (1989).

    PubMed  Google Scholar 

  28. Sanger F, Nicklen S, Coulson AR: DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 74: 5463–5467 (1977).

    PubMed  Google Scholar 

  29. Geliebter J: Dideoxynucleotide sequencing of RNA and uncloned cDNA. Focus 9: 5–8 (1987).

    Google Scholar 

  30. VanOmmen GJB, Groot GSP, Grivell LA: Transcription maps of mtDNAs of two strains of Saccharomyces: transcription of strain-specific insertions; complex RNA maturation and splicing. Cell 18: 511–523 (1979).

    Article  PubMed  Google Scholar 

  31. Engler G, Depicker A, Maenhout R, Villarroel R, VanMontagu M, Schell J: Physical mapping of DNA base sequence homologies between an octopine and a nopaline Ti plasmid of Agrobacterium tumefaciens. J Mol Biol 152: 183–208 (1981).

    PubMed  Google Scholar 

  32. Hooykaas PJJ, denDulk-Ras H, Ooms G, Schilperoort RA: Interactions between octopine and nopaline plasmids in Agrobacterium tumefaciens. J Bacteriol 143: 1295–1306 (1980).

    PubMed  Google Scholar 

  33. Hoekema A, Hirsch PR, Hooykaas PJJ, Schilperoort RA: A binary plant vector strategy based on separation of vir and T-region of the Agrobacterium tumefaciens Ti-plasmid. Nature 303: 179–180 (1983).

    Google Scholar 

  34. VonHeyne G: A new method for predicting signal sequence cleavage sites. Nucleic Acids Res 14: 4683–4690 (1986).

    PubMed  Google Scholar 

  35. Weisburg WG, Woese CR, Dobson ME, Weiss E: A common origin of rickettsiae and certain plant pathogens. Science 230: 556–558 (1985).

    PubMed  Google Scholar 

  36. Kyte J, Doolittle RF: A simple method for displaying the hydrophobic character of a protein. J Mol Biol 157: 105–132 (1982).

    PubMed  Google Scholar 

  37. Lipman DJ, Pearson WR: Rapid and sensitive protein similarity searches. Science 227: 1435–1441 (1985).

    PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Melchers, L.S., Maroney, M.J., den Dulk-Ras, A. et al. Octopine and nopaline strains of Agrobacterium tumefaciens differ in virulence; molecular characterization of the virF locus. Plant Mol Biol 14, 249–259 (1990). https://doi.org/10.1007/BF00018565

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00018565

Key words

Navigation