Abstract
Fungal plant parasites represent a growing concern for biodiversity and food security. Most ascomycete species are capable of producing different types of infectious spores both asexually and sexually. Yet the contributions of both types of spores to epidemiological dynamics have still to been fully researched. Here we studied the effect of mate limitation in parasites which perform both sexual and asexual reproduction in the same host. Since mate limitation implies positive density dependence at low population density, we modeled the dynamics of such species with both density-dependent (sexual) and density-independent (asexual) transmission rates. A first simple SIR model incorporating these two types of transmission from the infected compartment, suggested that combining sexual and asexual spore production can generate persistently cyclic epidemics in a significant part of the parameter space. It was then confirmed that cyclic persistence could occur in realistic situations by parameterizing a more detailed model fitting the biology of the Black Sigatoka disease of banana, for which literature data are available. We discuss the implications of these results for research on and management of Sigatoka diseases of banana.
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References
Adler F (1990) Coexistence of two types on a single resource in discrete time. J Math Biol 28(6):695–713
Agrios GN (2005) Plant diseases caused by nematodes. Plant Pathol 4:565–597
Anderson RM, May RM et al (1979) Population biology of infectious diseases: part I. Nature 280(5721):361–367
Anderson RM, May RM (1981) The population dynamics of microparasites and their invertebrate hosts. Philos Trans R Soc Lond Ser B Biol Sci 291:451–524
Arino J, McCluskey CC (2010) Effect of a sharp change of the incidence function on the dynamics of a simple disease. J Biol Dyn 4(5):490–505
Armstrong RA, McGehee R (1980) Competitive exclusion. Am Nat 115(2):151–170
Billiard S, López-Villavicencio M, Devier B, Hood ME, Fairhead C, Giraud T (2011) Having sex, yes, but with whom? Inferences from fungi on the evolution of anisogamy and mating types. Biol Rev 86(2):421–442
Bonner JT (1958) The relation of spore formation to recombination. Am Nat 92:193–200
Cannon P, Damm U, Johnston P, Weir B (2012) Colletotrichum current status and future directions. Stud Mycol 73:181–213
Castel M, Mailleret L, Andrivon D, Ravigné V, Hamelin FM (2014) Allee effects and the evolution of polymorphism in cyclic parthenogens. Am Nat 183(3):E75–E88
Caswell H (2001) Matrix population models. Wiley, London
Cornell SJ, Isham VS, Grenfell BT (2004) Stochastic and spatial dynamics of nematode parasites in farmed ruminants. Proc R Soc Lond Ser B Biol Sci 271(1545):1243–1250
Dennis B (1989) Allee effects: population growth, critical density, and the chance of extinction. Nat Resour Model 3(4):481–538
Dhooge A, Govaerts W, Kuznetsov YA, Meijer H, Sautois B (2008) New features of the software MatCont for bifurcation analysis of dynamical systems. Math Comput Modell Dyn Syst 14(2):147–175
Ene IV, Bennett RJ (2014) The cryptic sexual strategies of human fungal pathogens. Nat Rev Microbiol 12:239–251
Ermentrout B (2002) Simulating, analyzing, and animating dynamical systems: a guide to XPPAUT for researchers and students, vol 14. SIAM, Banglamung
Fisher MC, Henk DA, Briggs CJ, Brownstein JS, Madoff LC, McCraw SL, et al (2012) Emerging fungal threats to animal, plant and ecosystem health. Nature 484:186–194
Fouré E (1982) Les cercosporioses du bananier et leurs traitements. comportement des variétés. 1: Incubation et évolution de la maladie. Fruits 37(12):749–766
Gomes LIS, Douhan GW, Bibiano LB, Maffia LA, Mizubuti ES (2013) Mycosphaerella musicola identified as the only pathogen of the sigatoka disease complex present in Minas Gerais State, Brazil. Plant Dis 97(12):1537–1543
Gourbière S, Gourbière F (2002) Competition between unit-restricted fungi: a metapopulation model. J Theor Biol 217:351–368
Hadeler K (2012) Pair formation. J Math Biol 64(4):613–645
Hamelin FM, Castella F, Doli V, Marçais B, Ravigné V, Lewis MA (2016) Mate finding, sexual spore production, and the spread of fungal plant parasites. Bull Math Biol 78(4):695–712
Hochberg ME, Holt RD (1990) The coexistence of competing parasites. I. The role of cross-species infection. Am Nat 136(4):517–541
Hochberg ME (1991) Non-linear transmission rates and the dynamics of infectious disease. J Theor Biol 153(3):301–321
Jordan CF (1969) Derivation of leaf-area index from quality of light on the forest floor. Ecology 50:663–666
Korobeinikov A, Maini PK (2005) Non-linear incidence and stability of infectious disease models. Math Med Biol 22(2):113–128
Kuznetsov IA (1998) Elements of applied bifurcation theory, vol 112. Springer, Berlin
Landry C (2015) Modélisation des dynamiques de maladies foliaires de cultures pérennes tropicales différentes échelles spatiales : cas de la cercosporiose noire du bananier. PhD thesis, Université des Antilles
Lehtonen J, Kokko H (2011) Two roads to two sexes: unifying gamete competition and gamete limitation in a single model of anisogamy evolution. Behav Ecol Sociobiol 65(3):445–459
Lewis M, Kareiva P (1993) Allee dynamics and the spread of invading organisms. Theor Popul Biol 43(2):141–158
Liu W, Levin SA, Iwasa Y (1986) Influence of nonlinear incidence rates upon the behavior of SIRS epidemiological models. J Math Biol 23(2):187–204
May RM (1977) Togetherness among schistosomes: its effects on the dynamics of the infection. Math Biosci 35(3):301–343
May R, Woolhouse M (1993) Biased sex ratios and parasite mating probabilities. Parasitology 107(03):287–295
Mc Farland DD (1975) Models of marriage formation and fertility. Soc Forces 54(1):66–83
McCallum H, Barlow N, Hone J (2001) How should pathogen transmission be modelled? Trends Ecol Evol 16(6):295–300
Nåsell I (1978) Mating models for schistosomes. J Math Biol 6(1):21–35
Nåsell I, et al (1985) Hybrid models of tropical infections. Lecture Notes in Biomathematics, p 59
Nirenberg H, O’Donnell K (1998) New Fusarium species and combinations within the Gibberella fujikuroi species complex. Mycologia 90(3):434–458
Pennisi E (2010) Armed and dangerous. Science 327(5967):804–805
Reluga TC, Medlock J, Perelson AS (2008) Backward bifurcations and multiple equilibria in epidemic models with structured immunity. J Theor Biol 252(1):155–165
Rieux A, Soubeyrand S, Bonnot F, Klein EK, Ngando JE, Mehl A, Ravigné V, Carlier J, de Lapeyre de Bellaire L (2014) Long-distance wind-dispersal of spores in a fungal plant pathogen: estimation of anisotropic dispersal kernels from an extensive field experiment. PLOS ONE 9(8):e103,225
Robert S (2012) Emergence mondiale de la maladie des raies noires du bananier: histoire de l’invasion et stratégie de vie du champignon phytopathogène Mycosphaerella fijiensis. PhD thesis, Université de Montpellier, p 2
Robert S, Ravigné V, Zapater MF, Abadie C, Carlier J (2012) Contrasting introduction scenarios among continents in the worldwide invasion of the banana fungal pathogen Mycosphaerella fijiensis. Mol Ecol 21(5):1098–1114
Rodríguez-Guerra R, Ramírez-Rueda M, CE M, García-Serrano M, Lira-Maldonado Z, Guevara-González R, González-Chavira M, Simpson J (2005) Heterothallic mating observed between mexican isolates of Glomerella lindemuthiana. Mycologia 97:793–803
Savary S, Stetkiewicz S, Brun F, Willocquet L (2015) Modelling and mapping potential epidemics of wheat diseases–examples on leaf rust and Septoria tritici blotch using EPIWHEAT. Eur J Plant Pathol 142(4):771–790
Steenkamp E, Wingfield B, Coutinho T, Zeller K, Wingfield M, Marasas W, Leslie J (2000) PCR-based identification of MAT-1 and MAT-2 in the Gibberella fujikuroi species complex. Appl Environ Microbiol 66(10):4378–4382
Stover R (1980) Sigatoka leaf spots of bananas. Plant Dis 64(8):751
Turner DW, Fortescue JA, Thomas DS (2007) Environmental physiology of the bananas (Musa spp.). Braz J Plant Physiol 19(4):463–484
van den Bosch F, de Roos AM (1996) The dynamics of infectious diseases in orchards with roguing and replanting as control strategy. J Math Biol 35(2):129–157
van den Driessche P, Watmough J (2008) Further notes on the basic reproduction number. In: Allen LJS, Brauer F, Van den Driessche P, Wu J (eds) Mathematical epidemiology. Springer, Berlin Heidelberg, pp 159–178
Veit RR, Lewis MA (1996) Dispersal, population growth, and the Allee effect: dynamics of the house finch invasion of eastern north america. Am Nat 148(2):255–274
Volterra V (1938) Population growth, equilibria, and extinction under specified breeding conditions: a development and extension of the theory of the logistic curve. Hum Biol 10(1):1–11
Watling R, Frankland J, Ainsworth A, Isaac S, Robinson C (2002) Tropical mycology. CABI
Williams GC (1975) Sex and evolution, vol 8. Princeton University Press, Princeton
Zadoks J (1971) Systems analysis and the dynamics of epidemics. Phytopathology 61:600–610
Zhang W, Wahl LM, Yu P (2016) Backward bifurcations, turning points and rich dynamics in simple disease models. J Math Biol 73:1–30
Acknowledgements
V. R. received financial support by the French Agropolis Fondation (Labex Agro-Montpellier, BIOFIS Project Number 1001-001 and E-SPACE project number 1504-004), the European Union (ERDF), and the ‘Conseil Régional de La Réunion’. This work was supported by a grant overseen by the French National Research Agency (ANR) as part of the “Blanc 2013” program (ANR-13-BSV7-0011, FunFit project). F. H. also acknowledges partial funding from the Institut National de la Recherche Agronomique “Plant Health and the Environment” Division. We are grateful to C. Abadie, F. Bonnot, J. Carlier, C. Landry, S. Robert for biological discussions, to M. Baptiste for providing bibliographic material, to M. Castel, B. Facon, S. Gandon, O. Ronce, to Irma Mascio for help in the English editing, and to one anonymous reviewer for helpful comments.
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Appendix: Pair Formation, Mating Functions, and Mate Limitation
Appendix: Pair Formation, Mating Functions, and Mate Limitation
In Sect. 2.3, we derived a bilinear (quadratic under even sex ratio) mating function from first principles focusing on plant pathogenic fungi. In this section, we discuss whether alternate mating functions could be considered to account for mate limitation in fungal plant parasites in general.
According to Hadeler (2012), a good mating function \(\phi (x,y)\), where x and y are densities associated with both mating types, should satisfy the following conditions:
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1.
Preservation of positivity: \(\phi (x, 0) = \phi (0, y) = 0\) for all \(x, y\ge 0\),
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2.
Homogeneity: \(\phi (kx, ky) = k\phi (x, y)\) for \(k \ge 0\),
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3.
Monotonicity: \(u \ge 0\), \(v \ge 0 \) implies \(\phi (x + u, y + v) \ge \phi (x, y)\) .
Possible mating functions which satisfy these criteria include
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the geometric mean: \(\phi (x,y)=(xy)^{1/2}\),
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the harmonic mean: \(\phi (x,y)=2xy/(x+y)\),
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the minimum: \(\phi (x,y)=\min (x,y)\).
However, quoting Caswell (2001), “each of these function has been considered, and rejected by human demographers for one reason or another (Mc Farland 1975), but the harmonic mean is regarded as the less flawed.”
The bilinear mating function \(\phi (x,y)=xy\) does not respect homogeneity since \(\phi (kx,ky)=k^2xy\). Although this condition is indeed required for pair-formation, this does not invalidate our model since fungi and many other species with two mating types may not be monogamous, so that the mating function need not be restricted to pair formation.
Moreover, the homogeneity condition makes the function \(\phi \) necessarily such that \(\phi (x, x) = c x\) for some coefficient c (Hadeler 2012). In other words, such mating functions, per se, cannot account for mate limitation (or positive density dependence at low density), since the per capita mating rate is a constant c under even sex ratio. By contrast, the bilinear mating function yields a per capita mating rate with increase in population density: \(\phi (x,x)/x=cx\) (Dennis 1989).
In fact, we believe that the bilinear (or quadratic under even sex ratio) mating function used in this study is the most natural one to model mate limitation, since it is simple and it can be derived from first principles; according to Dennis (1989), it was introduced by Volterra (1938). Note that Dennis (1989)’s caution that the quadratic (mate-limited) growth rate should not exceed the linear (mate unlimited) growth rate is easily taken into account by normalizing population density with respect to its carrying capacity, as naturally done in this study (i.e., in his notations, \(\lambda \alpha n^2\le \lambda n\) is ensured by taking \(\alpha =1/\bar{n}\), with \(n\le \bar{n}\)). Also, the bilinear mating function is commonly used in the literature, e.g., (Veit and Lewis 1996; Lehtonen and Kokko 2011).
Actually, we simply used a cubic equation similar to the classical \(\dot{n}=kn(n-a)(1-n)\), where a represents an Allee effect threshold; this model is classically used to model mate-finding Allee effects in population dynamics (Lewis and Kareiva 1993). Indeed, with \(\alpha =0\), our strictly sexual model reads \(\dot{I}=\sigma I^2(N-I)\) (since in this case \(S=N-I\)), which amounts to taking \(a=0\) in the former model.
Extending our study to a negative exponential (Eq. 2) or to a rectangular hyperbola (Dennis 1989) would be interesting, but we do not think this would qualitatively change the results.
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Ravigné, V., Lemesle, V., Walter, A. et al. Mate Limitation in Fungal Plant Parasites Can Lead to Cyclic Epidemics in Perennial Host Populations. Bull Math Biol 79, 430–447 (2017). https://doi.org/10.1007/s11538-016-0240-7
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DOI: https://doi.org/10.1007/s11538-016-0240-7
Keywords
- Mixed mating system
- Fungi
- Epidemiology
- Nonlinear transmission
- Limit cycle
- Competitive exclusion
- Allee effect
- Sexual reproduction
- Asexual reproduction