Skip to main content
Log in

Phylogenetic analysis of Leymus (Poaceae: Triticeae) based on Random Amplified Polymorphic DNA

  • Published:
Biologia Aims and scope Submit manuscript

Abstract

To investigate the Ns genome donor of Leymus and to elucidate the origin of Xm genome of Leymus, Random Amplified Polymorphic DNA (RAPD) markers were used to analyze 13 Leymus accessions, together with 14 taxa from related Triticeae genera. A total of 156 clear and reproducible DNA fragments were amplified by 24 RAPD primers, among which 154 fragments (98.72%) were found to be polymorphic. The main results showed as following: (1) the Leymus species were clustered together first, and there is the closest phylogenetic relationship between L. akmolinensis and L. angustus; (2) Leymus species have Ns genome, which come from Psathyrostachys, and different Psathyrostachys species could serve as the donor for different Leymus species; (3) The partial Leymus species had a close phylogenetic relationship with Hordeum chilense, Australopyrum retrofractum, Lophyrum elongatum.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Anamthawat-Jónsson K. & Bödvarsdóttir S.K. 2001. Genomi-cand genetic relationships among species of Leymus (Poaceae: Triticeae) inferred from 18S-26S ribosomal genes. Am. J. Bot. 88: 553–559.

    Article  Google Scholar 

  • Aparajita S. & Rout GR. 2009. Genetic differentiation of Al-bizialebbeck (L.) Benth. Populations estimated by RAPD and ISSR markers. Plant Biosyst. 143: 361–368.

    Google Scholar 

  • Dewey D R. 1976. The genome constitution and phylogeny of Elymus ambiguous. Am. J. Bot. 63: 626–634.

    Article  Google Scholar 

  • Dewey D R. 1984. The genomic system of classification as a guide to intergeneric hybridization with the perennial Triticeae, pp. 209–280. In: Gustafson J.P. (ed.), Gene Manipulation in plant improvement. Plenum Press, New York.

    Chapter  Google Scholar 

  • Ding C.B., Zhou Y.H., Yang R.W., Zhang L. & Zheng Y.L. 2005. Relationships among Pseudoroegneria species assessed by RAPD markers. Acta Prataculturae Sinica 14: 38–43.

    Google Scholar 

  • Doyle J J. & Doyle J L. 1990. Isolation of plant DNA from fresh tissue. Focus. 12: 13–15.

    Google Scholar 

  • Fan X., Sha L.N., Yang R.W., Zhang H.Q., Kang H.Y., Ding C.B., Zhang L., Zheng Y.L. & Zhou Y.H. 2009. Phylogeny and evolutionary history of Leymus (Triticeae; Poaceae) based on a single-copy nuclear gene encoding plastid acetyl-CoA carboxylase. BMC Evol. Biol. 9: 247–252.

    Article  Google Scholar 

  • Guo G.Y., Yang R.W., Ding C.B., Fan X., Zhang L. & Zhou Y.H. 2014. Phylogenetic relationships between Leymus and related diploid Triticeae species revealed by ISSR markers. Biologia 69: 986–993.

    Article  Google Scholar 

  • Liu Z.P., Chen Z.Y., Pan J., Li X.F., Su M., Wang L.J., Li H.J. & Liu G.S. 2008. Phylogenetic relationships in Leymus (Poaceae: Triticeae) revealed by nuclear ribosomal internal transcribed spacer and chloroplast trnL-F sequences. Mol. Phylogen. Evol. 46: 278–289.

    Article  CAS  Google Scholar 

  • Löve A. 1984. Conspectus of the Triticeae. Feddes Rep. 95: 425–521.

    Google Scholar 

  • Rohlf F.J. 1994. NTSYS-pc: Numerical Taxonomy and Multivariate Analysis System, Version 2.0. Exter Software, New York.

    Google Scholar 

  • Sha L.N., Fan X., Yang R.W., Kang H.Y., Ding C.B., Zhang L., Zhang L., Zheng Y.L. & Zhou Y.H. 2010. Phylogenetic relationships between Hystrix and its closely related genera (Poaceae: Triticeae) based on nuclear Accl, DMC1 and chloroplast trnL-F sequences. Mol. Phylogen. Evol. 54: 327–335.

    Article  CAS  Google Scholar 

  • Sha L.N., Yang R.W., Fan X., Wang X.L. & Zhou Y.H. 2008. Phylogenetic analysis of Leymus (Poaceae: Triticeae) inferred from nuclear rDNA ITS sequences. Bioch. Genet. 46: 605–619.

    Article  CAS  Google Scholar 

  • Shiotan I. 1968. Species differentiation in Agropyron, Elymus, Hystrix, and Sitanion. Proceedings of the 12th International Congress of Genetics. The Science Council of Japan, Tokyo, 184 pp.

    Google Scholar 

  • Sun G.L., Wu B.H. & Liu F. 1995. Cytogenetic and genomic relationships of Thinopyrum, elongatum with two Psathy-rostachys species and withLeymus secalinus Poaceae. Plant Syst. Evol. 197: 225–231.

    Article  Google Scholar 

  • Tzvelev N.N. 1976. Zlaki SSSR (Poaceae URSS.). Nauka, Leningrad.

    Google Scholar 

  • Wang R R-C. & Jensen K B. 1994. Absence of the J genome in Leymus species (Poaceae: Triticeae): evidence from DNA hybridization and meiotic pairing. Genome 37: 231–235.

    Article  CAS  Google Scholar 

  • Yang R.W., Zhong M.H., Zou X.M., Ding C.B., Zhang L. & Zhou Y. H. 2011. Phylogenetic relationships between Leymus (Poaceae, Triticeae) and related diploid Triticeae species-based on isozyme and genome-specific random amplified polymorphic DNA (RAPD) markers. Plant Biosystems 146: 84–91.

    Article  Google Scholar 

  • Yang R.W., Zhou Y.H., Ding C.B., Zheng Y.L. & Zhang L. 2008. Relationships among Leymus species assessed by RAPD markers. Biol. Plant. 52: 237–241.

    Article  CAS  Google Scholar 

  • Zhang H.B. & Dvorak J. 1991. The genome origin of tetraploid of Leymus (Poaceae: Triticeae) inferred from variation in repeated nucleotide sequences. Am. J. Bot. 78: 871–884.

    Article  Google Scholar 

  • Zhang H.Q. & Zhou Y.H. 2009. Genetic relationships among Hys-trixpatula, H. duthiei and H. longearistata according to mei-oticstudies and genome-specific RAPD assay. Biol. Plant. 53: 45–52.

    Article  CAS  Google Scholar 

Download references

Acknowledgements

This work was supported by the National Natural Science Foundation of China (No. 31270243). We would like to specially thank the Triticeae Research Institute of Sichuan Agriculture University for providing the seeds and plants.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Rui-Wu Yang.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Li, YY., Lei, YX., Chai, GH. et al. Phylogenetic analysis of Leymus (Poaceae: Triticeae) based on Random Amplified Polymorphic DNA. Biologia 71, 396–401 (2016). https://doi.org/10.1515/biolog-2016-0048

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1515/biolog-2016-0048

Key words

Navigation