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Exploration of new scaffolds pyrazole derivatives containing thiourea skeleton as anticancer activity using QSAR approach

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Abstract

A forty six compounds series of potential epidermal growth factor receptor kinase inhibitors of pyrazole derivatives containing thiourea analogs were subjected to quantitative structure–activity relationship analyses. The QSAR model developed gave good predictive correlation coefficient (r 2) of 0.8225, significant cross-validated correlation coefficient (q 2) of 0.7322, r 2 for external test set (pred_r 2) 0.7883 was developed. It will be useful to build a QSAR model to predict and optimize the properties and activities of pyrazole derivatives and determine key structural requirements for their enhanced anticancer activity.

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References

  • Adjei AA (2001) Blocking oncogenic Ras signaling for cancer therapy. J Natl Cancer Inst 93:1062

    Article  Google Scholar 

  • Baumann K (2002) An alignment-independent versatile structure descriptor for QSAR and QSPR based on the distribution of molecular features. J Chem Inf Comput Sci 42:26–35

    Article  Google Scholar 

  • Bhadoriya KS, Sharma MC, Jain S (2015a) Pharmacophore modeling and atom-based 3D-QSAR studies on amino derivatives of indole as potent isoprenylcysteine carboxyl methyltransferase (Icmt) inhibitors. J Mol Struct 1081:466–476

    Article  Google Scholar 

  • Bhadoriya KS, Sharma MC, Jain S (2015b) Discovery of new lead as 2, 4-dihydropyrano [2,3-c] pyrazole through pharmacophore modeling, atom-based 3D-QSAR, virtual screening and docking strategies for improved anti-HIV-1 chemotherapy. J Taibah Univ Sci 9(4):521–530

    Article  Google Scholar 

  • Chabner BA, Roberts TG Jr (2005) Chemotherapy and the war on cancer. Nat Rev Cancer 5:65–72

    Article  Google Scholar 

  • Charifson PS (1997) In practical application of computer-aided drug design. Marcel Dekker Inc., New York

    Google Scholar 

  • Cramer RD, Patterson DE, Bunce JD (1988) Comparative molecular field analysis (CoMFA) 1. Effect of shape on binding of steroids to carrier proteins. J Am Chem Soc 110:5959–5967

    Article  Google Scholar 

  • Croux C, Joossens K (2005) Influence of observations on the misclassification probability in quadratic discriminant analysis. J Multivar Anal 96:348–403

    Article  MathSciNet  MATH  Google Scholar 

  • El-Azab AS, Al-Omar MA, Abdel-Aziz AA, Abdel-Aziz NI, el-Sayed MA, Aleisa AM, Sayed-Ahmed MM, Abdel-Hamide SG (2010) Design, synthesis and biological evaluation of novel quinazoline derivatives as potential antitumor agents: molecular docking study. Eur J Med Chem 45:4188

    Article  Google Scholar 

  • Golbraikh A, Tropsha A (2002) Predictive QSAR modeling based on diversity sampling of experimental datasets for the training and test set selection. J Comp Aided Mol Des 16:357–369

    Article  Google Scholar 

  • Gullick WJ (1991) Prevalence of aberrant expression of the epidermal growth factor receptor in human cancers. Br Med Bull 47:87–98

    Article  Google Scholar 

  • Halgren TA (1996) Merck molecular force field. III. Molecular geometries and vibrational frequencies for MMFF94. J Comput Chem 17:553–586

    Article  Google Scholar 

  • Hansch C, Leo A (1995) Exploring QSAR: fundamentals and applications in chemistry and biology. American Chemical Society, Washington, DC

    Google Scholar 

  • Huberty CJ (1994) Applied discriminant analysis. Willey, New York

    MATH  Google Scholar 

  • Kolibaba KS, Druker BJ (1997) Protein tyrosine kinases and cancer. Biochim Biophys Acta 21:1333

    Google Scholar 

  • Lv PC, Li HQ, Sun J, Zhou Y, Zhu HL (2010) synthesis and biological evaluation of pyrazole derivatives containing thiourea skeleton as anticancer agents. Bioorg Med Chem 18(13):4606–4614

    Article  Google Scholar 

  • Vlife MDS software package (2008) Supplied by Vlife science technologies Pvt. Ltd, Pune

  • Perun TJ, Propst CL (1989) In computer-aided drug design. Marcel Dekker Inc., New York

    Google Scholar 

  • Seymore L (1999) Novel anti-cancer agents in development: exciting prospects and new challenges. Cancer Treat Rev 25:301–312

    Article  Google Scholar 

  • Sharma MC (2014) Structural requirements of N-aryl-oxazolidinone-5-carboxamide derivatives for anti-HIV protease activity using molecular modelling techniques. J Taibah Univ Sci 8:111–123

    Article  Google Scholar 

  • Sharma MC (2015a) A comparative QSAR analysis of substituted imidazolones derivatives as angiotensin II AT1 receptor antagonists. Netw Model Anal Health Inform Bioinform 4:18

    Article  Google Scholar 

  • Sharma MC (2015b) Predictive QSAR modeling of substituted phenylpyrazinones as corticotropin-releasing factor-1 (CRF1) receptor antagonists. Netw Model Anal Health Inform Bioinform 4:26

    Article  Google Scholar 

  • Sharma MC (2015c) Structural features of substituted triazole-linked chalcone derivatives as antimalarial activities against D10 strains of Plasmodium falciparum: a QSAR approach. J Cent South Univ 22:3738–3744

    Article  Google Scholar 

  • Sharma MC (2015d) Structural insights into mode of actions of novel substituted 4- and 6-azaindole-3-carboxamides analogs as renin inhibitors: molecular modeling studies. Med Chem Res 24:1038–1059

    Article  Google Scholar 

  • Sharma MC (2016a) Identification of 3-nitro-2, 4, 6-trihydroxybenzamide derivatives as photosynthetic electron transport inhibitors by QSAR and pharmacophore studies. Interdiscip Sci Comput Life Sci 8:109–121

    Article  Google Scholar 

  • Sharma MC (2016b) A structure-activity relationship study of imidazole-5-carboxylic acids derivatives as angiotensin II receptor antagonists combining 2D and 3D QSAR methods. Interdiscip Sci Comput Life Sci 8(1):1–10

    Article  Google Scholar 

  • Sharma MC (2016c) Optimization of antiproliferative activity of synthetic uredio-substituted sulfamate derivatives: QSAR approach. Ind Drug 53(8):17–23

    Google Scholar 

  • Sharma MC (2016d) QSAR studies of novel 1-(4-methoxyphenethyl)-1H-benzimidazole-5-carboxylic acid derivatives and their precursors as antileukemic agents. J Taibah Univ Sci 10:122–130

    Article  Google Scholar 

  • Sharma MC (2016e) Rationalization of physicochemical characters and structural determinants of benzimidazole derivatives as protein kinase inhibitors computational approach. Netw Model Anal Health Inform Bioinform 5:34

    Article  Google Scholar 

  • Sharma MC (2016f) QSAR studies on pyrazolo [1, 5-a] pyrimidine-based as pim-1 kinase inhibitor. Ind Drug 53(11):12–19

    Google Scholar 

  • Sharma MC (2016g) 2D QSAR Studies on a Series of substituted purine derivatives inhibitory activity against c-Src tyrosine kinase. J Taibah Univ Sci 10(4):563–570

    Article  Google Scholar 

  • Sharma MC (2016h) Structural feature study of novel furoxan analogs as potent anti-trypanosomatid agents: QSAR statistical approach. Ind Drug 53(9):12–21

    Google Scholar 

  • Sharma MC (2016i) Computational design of novel renin inhibitors of indole-3-carboxamide derivatives through QSAR studies. Netw Model Anal Health Inform Bioinform 5:9

    Article  Google Scholar 

  • Sharma MC (2017a) QSAR approach to the study of the EGFR tyrosine kinase inhibitors: thiazolyl-pyrazoline derivatives. Ind Drug 54(3):5–12

    Google Scholar 

  • Sharma MC (2017b) A QSAR study of substituted pyrazoline derivatives as potential anti-tuberculosis agents. Ind Drug 54(3):21–30

    Google Scholar 

  • Sharma MC, Sharma S (2014a) Prediction of potent therapeutic targets of anticonvulsant ligands substituted 4, 6-Dichloroindole-2-carboxylic acids as N-methyl-d-aspartate receptor: molecular modelling approach. J Taibah Univ Sci 8:98–110

    Article  Google Scholar 

  • Sharma MC, Sharma S (2014b) Molecular modeling studies of thiophenyl C-aryl glucoside SGLT2 inhibitors as potential antidiabetic agents. Intern J Med Chem. doi:10.1155/2014/739646

    Google Scholar 

  • Sharma MC, Sharma S (2016a) Molecular modeling studies of 3-acyl-2-phenylamino-1,4-dihydroquinolin-4-one derivatives as phosphatase SerB653 inhibitors. Med Chem Res 25(10):2119

    Article  Google Scholar 

  • Sharma MC, Sharma S (2016b) Investigation on quantitative structure activity relationships of a series of inducible nitric oxide. Interdiscip Sci Comput Life Sci 8(4):346–351

    Article  Google Scholar 

  • Sharma MC, Kohli DV (2017) Development of a robust QSAR model of angiotensin II receptor reveals a k-nearest neighbor applicable to diverse scaffolds. Ind drug (Accept

  • Sharma MC, Sharma S (2017) Exploration of Important Sites of angiotensin II AT1 receptor evaluation of pyrido [2, 3-d] pyrimidine analogues for structural modification using computational approach. Netw Model Anal Health Inform Bioinform 6:2. doi:10.1007/s13721-016-0143-4

    Article  Google Scholar 

  • Sharma MC, Kohli DV, Sharma S (2013) Molecular modeling studies of substituted 2, 4, 5-trisubstituted triazolinones aryl and nonaryl derivatives as angiotensin II AT1 receptor antagonists. J Chem doi:10.1155/2013/427181

    Google Scholar 

  • Sharma MC, Sharma S, Sharma P, Kumar A, Bhadoriya KS (2014) Structural insights for substituted acyl sulfonamides and acyl sulfamides derivatives of imidazole as angiotensin II receptor antagonists using molecular modelling approach. J Taiwan Inst Chem Eng 45:12–23

    Article  Google Scholar 

  • Sharma MC, Sharma S, Sharma S (2016a) Computational study of diarylcyclopentene derivatives as selective prostaglandin EP1 receptor antagonist: QSAR approach. Netw Model Anal Health Inform Bioinform 5:14. doi:10.1007/s13721-016-0120-y-2016

    Article  Google Scholar 

  • Sharma MC, Sharma S, Bhadoriya KS (2016b) QSAR studies on pyrazole-4-carboxamide derivatives as aurora a kinase inhibitors. J Taibah Univ Sci 10(1):107–114

    Article  Google Scholar 

  • Tietze LF, Steinmetz A, Balkenhohl F (1997) Solid-phase synthesis of polymer-bound Β-ketoesters and their application in the synthesis of structurally diverse pyrazolones. Bioorg Med Chem Lett 7:1303

    Article  Google Scholar 

  • Workman P, Kaye S (2002) Translating basic cancer research into new cancer therapeutics. Trends Mol Med 8(4):S1–S9

    Article  Google Scholar 

Download references

Acknowledgements

The author M. C. Sharma would like to thank VLife Sciences Technologies Pvt. Ltd. Pune for providing the trial version software facility.

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Sharma, M.C., Sharma, S. Exploration of new scaffolds pyrazole derivatives containing thiourea skeleton as anticancer activity using QSAR approach. Netw Model Anal Health Inform Bioinforma 6, 10 (2017). https://doi.org/10.1007/s13721-017-0151-z

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  • DOI: https://doi.org/10.1007/s13721-017-0151-z

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