Introduction

Grain size analysis is the most basic property used by geologists to study transport phenomenon such as transport and deposit of sediments. This property also helps the ecologists in the study of habitats and engineers in the study of permeability. Geochemists use this property extensively to study kinetic reactions and hydrologists use it to study subsurface fluid flow (Blatt et al. 1972; McCave and Syvitski 1991).

The mechanical analysis of the sediment not just for the nature of the sediment, also to understand the physical properties of the sediments and revealed the relationship and the effect of the grain size, source materials and depositional environment. Some investigations have shown the dependence of radionuclide concentrations, heavy metal, and magnetic susceptibility on grain size (Ramasamy et al. 2014; Paramasivam et al. 2015; Melquiades et al. 2014).

Sediment texture indicates the characteristics of soil such as clay, silt, and proportion of sand. In the solid phase, clay has the largest surface of contact, and hence, it easily adsorbs metals. Water permeability is higher in sandy sediments due to the presence of sand granules. Silts are intermediate in granulometry aggregate light particles. Texture of the sediment soil is determined using densitometry.

Spectroscopic techniques like energy-dispersive X-ray fluorescence (EDXRF), dual-frequency susceptibility meter, and gamma ray spectrometry measurements are commonly employed for the determination of heavy metals, magnetic particle, and radioactivity concentration in sediments. These techniques are not conventionally used for texture determination. However, it is known that metals used to have a greater affinity for smaller particles and organic compounds, i.e., for clay sediments, but it depends on geochemical conditions.

The main aim of this study was to present a method for physicochemical parameters combining three spectroscopy techniques with multivariate analysis. Specifically, data were used from energy-dispersive X-ray fluorescence (EDXRF), dual-frequency susceptibility meter, and gamma ray spectrometry measurements in sediment samples which were combined with principal component analysis for exploratory data analysis and with cluster analysis for classification.

Materials and methods

Sediment sampling

Twenty-two sediment samples were collected from Chennai Coast along the Bay of Bengal Coastline (Pulicat Lake to Vadanemmeli) in Southeastern India using a Peterson grab sampler from 10 m water depths during the pre-monsoon season. All sampling points were located parallel to the shoreline as shown in Fig. 1. The grab sampler collects the samples at 10 cm below the seabed in all sampling points. Around 25-cm-thick subsurface samples from the seabed were collected by the grab. From the grabbed samples, 10-cm-thick sediment layer was sampled from the middle of the grab to avoid metal contamination by the jaws of the grab.

Fig. 1
figure 1

Sampling locations Pulicat Lake to Vadnemmeli of Chennai coast

Table 1 shows the geographic coordinates (latitudes and longitudes) of the various sampling locations. A hand-held Global Positioning System—Garmin oregon 550—was used in measuring the coordinates of the sampling points. Interstation spacing was maintained at 3NM (nautical mile).

Table 1 Geographical latitude and longitude for the sampling locations

Coastal craft was utilized for collecting samples at each station. After traveling to the beach by road, the sample collection team hires a boat from artisanal fishermen, who convey them to the sampling points after about 60 min of sailing. The Peterson grab sampler is suitable for sampling near-shore sea bed sediments, particularly, in locations where the sea bed is dominated by sandy, silt, and/or gravelly sediments. This technique is the conventional method of sampling shallow sea bottom sediments (Sly 1969; Ingham 1975; Ravisankar et al. 2015).

The samples were immediately transferred to polythene bags to prevent them from being in continuous contact with the metallic dredge. The top layer of the samples was scooped with an acid-washed plastic spatula. The samples were stored in plastic bags and kept in refrigeration or at 4 °C. They were subsampled using coning and quartering method (Ravisankar et al. 2015). The subsamples were air-dried and larger stone fragments or shells were manually removed.

Sample preparation for different analysis

EDXRF technique

The samples were oven dried at 105 °C for constant weight and sieved using a 63-μm sieve. The use of grain sizes of < 63 µm, in such analysis, has several advantages: (1) Heavy metals are mainly linked to silt and clay particles, (2) this grain size is like that of suspended matter in water, and (3) it has been used in many studies on heavy metal contamination.

Then the samples were grinded to a fine powder using an agate mortar. All the pulverized samples were stored in desiccators until they were analyzed. One gram of the fine ground sample and 0.5 g of boric acid (H3BO3) were mixed. The mixture was thoroughly ground and pressed to a pellet of 25 mm diameter using a 20-ton hydraulic press (Ravisankar et al. 2011).

Magnetic studies

In the laboratory, the samples were air-dried at room temperature to reduce mass contribution of water and to avoid any chemical reactions. They were then sieved using a 1-mm sieve mesh to remove particles such as glass, plant debris, refuse, and small stones. The sieved samples were stored in a plastic container for further laboratory measurements.

Natural radioactivity measurements

The samples were air-dried at 105 °C for constant weight and sieved through 250-μ mesh. The homogenized sample was placed in a 250-g airtight PVC container. The inner lid was placed and closed tightly with outer cap. Each sediment sample container was left for at least 5 weeks to reach secular equilibrium between 238U (226Ra) and 232Th (228Ra) and their progenies.

Granulometric analysis

The samples were examined to measure their granulometric fractions such as contents of sand, silt, and clay. About 100 g of sediment was taken for separation of sand, silt, and clay fractions by sieving (Suresh et al. 2011). In order to determine the organic matter (OM) in the samples, 20 g of bulk samples and 5–10 g of various grain sized samples were taken for analysis.

Sample analysis for different techniques

EDXRF technique

The pellets were analyzed using EDXRF spectrometer (model EX-6600SDD) manufactured by Xenemetrix, Israel). This instrument is available at Environmental and Safety Division, Indira Gandhi Centre for Atomic Research (IGCAR), Kalpakkam, Tamilnadu. This spectrometer is equipped with a side window X-ray tube (370 W) that has Rhodium as anode. The power specifications of the tube are 3–60 kV and 10–5833 μA. Selection of filters, tube voltage, sample position, and current are fully computer controlled and having an energy resolution of 136 eV ± 5 eV Mn customizable. The silicon drift detector 25 mm X-ray and 10–sample turret enables the instrument to position and analyze 10 samples concurrently. Quantitative analysis was conducted with the help of in-built nEXT software. A standard soil sample (NIST SRM 2709a) was used as reference material for standardizing the instrument. This soil standard was obtained from a follow field in San Joaquin valley, central California.

Magnetic susceptibility (χ) measurements

The magnetic susceptibility measurements were then carried out on the sieved samples packaged in a 10-ml plastic container at laboratory temperature. Measurements of magnetic susceptibility were made at both low (0.465 kHz) and high (4.65 kHz) frequencies using MS2B dual-frequency susceptibility meter linked to a computer operated using a Multisus2 software. All measurements were conducted at the 1.0 sensitivity setting. Each sample was measured five times in two different frequencies (low and high) and an average is calculated.

Gamma ray spectrometry

Sediment samples were subjected to gamma spectral analysis with a counting time of 20,000 s. A 3 inch × 3 inch NaI (Tl) detector was employed with adequate lead shielding which reduced the background by a factor of about 95%. The concentrations of various radionuclides of interest were determined in Bq/kg using the count spectra. To find out the radioactivity content in sediment samples, the systems have to be efficiency calibrated for various energies of interest in the selected sample geometry. As the measurement is for the natural radioactive elements 40K, uranium, and thorium, the gamma energies selected are 1460 keV for 40K, 1763 keV (from daughter product 214Bi) for uranium, and 2614 keV (from daughter product 208Tl) for thorium. The detection limit of NaI(Tl) detector system for 40K, 238U, and 232Th is 8.50, 2.21, and 2.11 Bq/kg, respectively, for a counting time of 20,000 s.

Determination of physicochemical properties of sediments

Particle size analysis

A particle size analysis of sediments is carried out by mechanical sieve shaker method. This method is very efficient to find the percentage of sand, silt, and clay in sediments (Sonaye and Baxi 2012). A typical mechanical sieve shaker is shown in Fig. 2.

Fig. 2
figure 2

Mechanical sieve shaker

Sieves of different sizes (12 mm, 150 mm, and 200 mm) assembled in ascending order in a sieve shaker. A weighed sediment sample is poured into the top sieve which has the largest screen openings. Each lower sieve in the column has smaller openings than the one above. At the base is a round pan called the receiver. The column is typically placed in a mechanical shaker. The shaker shakes the column, usually for 3–5 min. After the shaking is complete, the sample on each sieve is weighed. Then, percentage of sand, slit and clay in sediment is calculated using the following equation:

$$ {\text{\% Of sand}}, {\text{slit and clay}} = \frac{{W_{\text{Sieve}} }}{{W_{\text{Total}} }} \times 100{\text{\% }} $$
(1)

where WSieve is a mass of sample retained in the sieve and WTotal is a total mass of sample.

pH measurement

Measurement of sediment pH using a potentiometer determines the degree of acidity or alkalinity in sediment suspended in water and in 0.01 M calcium chloride solution. The potentiometer is calibrated with buffer solutions of known pH prior to the analysis of samples. A typical picture of digital pH meter is shown in Fig. 3.

Fig. 3
figure 3

A typical picture of digital pH meter

If the meter is calibrated using pH 4.00 and pH 7.00 buffers and the sample reading is > 7.00, the meter must be recalibrated using pH 7.00 and 10.00 buffers. Likewise, if the meter is calibrated using 7.00 and 10.00 buffers and the pH reading is < 7.00, the meter must be recalibrated using the 4.00 and 7.00 buffers. The sample pH will be displayed. Record the reading once the meter has stabilized (Kalra 1995). A 10-g air-dried sediment sample was taken in a paper cup. Then, 10 mL of deionizer water is added to sediment sample using pipette. After 5 min, the solution is thoroughly mixed using a glass rod or mechanical stirrer. Let sediment –H2O suspension stand for 30 min, and solution should be filtered using filter paper. Finally, pH of sediment sample was measured with help of pH probe.

Electrical conductivity measurements

The electrical conductivity (EC) of a solution is the measure of the ability of the solution to conduct electricity. The EC is reported in either millimhos per centimeter or the equivalent decisiemens per meter. A digital display electrical conductivity meter was used for measurements. A solution of 0.005 N KCl has an electrical conductivity of 720 ± 1 dS/m (mmho/cm) at 25 °C prepared solution as the reference solution (Shivanna, and Nagendrappa 2014). Electrical conductivity meter was calibrated by above said reference solution. A typical picture of electrical conductivity meter is shown in Fig. 4.

Fig. 4
figure 4

A typical picture of electrical conductivity meter

Twenty-five grams of sediment sample should be mixed with 40 mL of deionizer water, resulting in water/soil ratio of 2:1. The 4-h equilibration period provides time for some slowly soluble constituents to approach solution equilibrium. Then, an electrode was inserted into solution to measure the conductivity of sample.

Statistical analysis

Statistical technique involving principal component analysis (PCA) was employed to identify the effects of physicochemical properties on the heavy metal, magnetic susceptibility, and natural radioactivity concentration. In addition, cluster analysis (CA) was performed to obtain information about the influence of the sediment properties to the studied parameters. Pearson correlations analysis was performed for studied variables with physicochemical properties to find out any existing relation between them. A computer code Statistical Package for Social Science (SPSS, version 16.0) was used in performing the statistical analyses.

Results and discussion

Physicochemical parameters analysis

The estimated results of the sand, silt, and clay and physicochemical parameters are present in Table 2. The sand percentages are found to vary between 0.1 and 0.83, while the average of the sand percentage for overall the stations is 0.46%. The high content in sand percentage in the samples (CPL) may indicate the high content of quartz, whereas the lowest percentage of sand observed for CPK showed the low content of light minerals in the study area. The silt percentages vary from 95.68 to 99.01% with an average of 98.06%. The high percentage of slit observed for CPK may be due to the primary minerals (Lal and Shukla 2004). Slit is the main constituent in all the sampling locations. The clay content ranges from 0.52 to 4.14% and has an average content of 1.48%. This high content of clay in CPL indicates higher organic carbon in the sediment.

Table 2 Grain size analysis of physicochemical parameters of sediments of Chennai coast

The pH measurement gives the nature of acidity or alkalinity. pH is defined as the negative logarithm of the activity of hydronium ions (H+) in a solution. A pH below 7 is acidic and above 7 is alkaline. The values of pH measurements of all the locations showed acidic nature which indicated that quality of the sediment is not affected in the study area.

Electrical conductivity (EC) indicates the level of dissolved salts by measuring the capability of a solution to carry an electric current. The electrical conductivity (EC) ranged from 0 to 20,000 µS/m showed the non-saline nature. All the sediment samples had conductivity in the range from 0.118 to 0.684 indicating that the electrical conductivity does not affect the sediment quality.

Multivariate statistical analysis (MCA)

Multivariate statistical analysis (Pearson correlation, factor, and cluster analysis) was performed using SPSS 16.0 version and standardization of all sediments properties. Pearson correlation coefficients were determined to know the relation between magnetic susceptibility and physicochemical properties of sediments. Multivariate statistical techniques such as cluster analysis and factor analysis are essential tools in grouping materials according to their properties. Factor analysis (FA) helped to explain variance in the results. Using linear correlation variance of one sediment property from the entire samples is the key objective of this analytical process. A minimum of 40.82% of variation with an eigenvalue above 1 was observed. Clustering using hierarchical method proposed by Sneath and Sokal (1973) has been employed here. By grouping the sediments using dissimilarity coefficients by squared Euclidean distance method, the similarity patterns were studied.

Relation between physicochemical properties and magnetic measurements

A physicochemical property is important physical indicator of sediment environment. In particular, grain size analysis is a good indicator of magnetic property variations in sediments. Hence, in order to understand the variations in magnetic properties, the Pearson correlation coefficient determined and presented in Table 3.

Table 3 Relation between magnetic parameters and physicochemical properties (Pearson correlation)

As seen from Table 3, a positive correlation was observed between high-frequency susceptibility and % slit electrical conductivity. This indicates that concentration of slit and conductivity increases the magnetic property of sediments. At the same time, negative correlation was observed between % sand, % clay, and pH with high-frequency susceptibility, which suggests that magnetic parameters in sediments tend to decreases with decreasing grain size.

In order to ensure the positive and negative correlations, factor analysis was carried between magnetic and physicochemical variables by Varimax-normalized rotation. The rotated factor loadings of variables are given in Table 4. Factor analysis has extracted two factors. The factors 1 and 2 account for 40.82% of total variance. Factor 1 was characterized by positive loadings of % slit, electrical conductivity, and low- and high-frequency susceptibility of sediments with 29.10% of variance, whereas factor 2 was loaded by concentrations of % sand, % clay, pH, and % FD of sediments with 11.72% of variance. The factor 1 signifies the association of slit percentage of sediment and magnetic minerals in the sediments. These results are good agreement with correlation analysis. A rotated two-dimensional factor loadings of variables are shown in Fig. 5.

Table 4 Factor loadings of magnetic parameters and physicochemical properties
Fig. 5
figure 5

Rotated factor loadings of physicochemical and magnetic variables

Cluster analysis was carried out to know the similarity between the variables. Two clusters are formed based on the similarities of variables and are shown in Fig. 6. Cluster I contains % sand. % clay, slit, pH, conductivity, and % FD, which indicates that the concentration of magnetic minerals in sediments depends on the physicochemical properties. Cluster II contains low- and high-frequency susceptibilities. This indicates that the low- and high-frequency susceptibilities are inter-related.

Fig. 6
figure 6

Clustering of physicochemical and magnetic variables

Relationship between heavy metals and physicochemical properties

In order to identify correlation between metal concentrations and other physicochemical parameters, the Pearson correlation matrix was used. Mg, Al, K, Ca, Fe, Cr, Mn, Co, Ni, and Zn had a positive correlation (p < 0.01) with the other sediments.

Some unique correlation was observed in the physicochemical properties as shown in the correlation matrix in Table 5. Metals such as Mg, Al, K, Ca, Ni, and Zn displayed positive correlation (p < 0.01) with % sand and % clay. On the other hand, it had reverse effect on % silt and pH (p < 0.01). An increase in metal concentration could cause an increase in the percentage.

Table 5 Pearson correlation between heavy metals and physicochemical properties

To prepare quality indices, factor analysis—a multivariate statistical method—has been used in this study. A smaller group of factors substituted for the initial set of variables to ensure much information of the original variables is possibly preserved. Using factor analysis, an index is constructed for variability with smaller and simpler vectors from the original data (Lin et al. 2002). In factor analysis, a correlation matrix is first prepared between the variables. The extraction of factors with appropriate rotation seeks a final solution that is easier to understand. In the beginning, all the variables are treated equal, but after the correlation is carried out, the final quality is expressed in the environmental situation.

The use of this technique is largely helpful to study the relationship between variables and understand its significance in the environment over space and time. This analysis helps to identify hidden trends associated with sediment dynamics. Factor analysis between physicochemical and heavy metal variable was also done in this study.

The result are given in Table 6, and it depicts the factor loading and the two principal components associated with different variables responsible for their contribution. Figure 7 shows the factor loading of physicochemical and heavy metals. A 37.88% is obtained for the factor I. A better correlation is seen in total and partial Fe, total Ni, total Mn and partial sand, total Cr, total Ti and partial clay, and total and partial V. Hence 20.67% of variance was observed with total Al, Ca, K, and partial EC at the most. The potential contribution of physicochemical properties is seen in the correlation of these parameters.

Table 6 Factor analysis of physicochemical and heavy metal variables
Fig. 7
figure 7

Rotated factor loadings of physicochemical and heavy metals

Cluster analysis

Figure 8 shows the cluster diagram of physicochemical parameters with heavy metals. Cluster analysis for mean elements could be grouped into two clusters or groups. % sand, EC, % clay, Co, pH, Ni, Zn, V, Cr, % slit, Mn, Mg, Ti, K, Ca, and Fe have good similarity and are clustered in one group,. Only Al was clustered in another group. Strong similarity between heavy metal and physicochemical properties showed origin of these metals varies from physicochemical properties.

Fig. 8
figure 8

Clustering of physicochemical and heavy metal variables

Relation between radionuclides and physicochemical properties

Pearson correlation analysis

In order to analyze the relation between radionuclides and physicochemical properties in sediments, a Pearson correlations analysis was performed for variables. Table 7 presents the correlation coefficients (r) of natural radioactive concentrations detected in sediments and physicochemical properties. Using a Pearson correlation coefficient, significant positive relation was found between Th and % sand (r = 0.112) and % slit (r = 0.194). Also, a negative relationship was observed between Th and (r = − 0.417) electrical conductivity (EC). The findings also showed that a good positive correlation between U and pH (r = 0.279). Barisic et al. (1998) reported that the distribution of uranium and thorium in sediments is strongly influenced and governed by grain-size distribution.

Table 7 Pearson correlation analysis of radioactive and physicochemical variables

Therefore, reasonable positive correlation was detected between the values of pH, uranium (r = 0.279), and thorium (r = 0.385). This indicated that the physicochemical properties are considered as one of the important factors describing the radioactivity contents of the sediments.

Factor analysis

Principal component analysis and hierarchical cluster analysis are good methods in grain size analysis and study of radioactive variable in sediments.

For standard recognition, PCA is applied to explain the discrepancies between a number of correlated variables. The linear combination variables are obtained in PCA using orthogonal transformation which is an effective dimension reduction technique. The principal components are the new variables, and they are smaller than the original variables, and hence the PCAs are uncorrelated, and they retain most variations in the first few components. A score plot is an excellent tool that displays the relationship between objects looking for groups, trends, sorts, and outlines. Also the loading plots help in sample classification.

The analysis generated two factors which together account for 40.22% of the total variance. The rotated loadings, percentage of variance, and cumulative percentage of two factors are given in Table 8.

Table 8 Factor analysis of radioactive and physicochemical variables

The first factor accounts for 27.39% of the total variance and is characterized by high loadings of U, Th, and pH. This indicates that U and Th may be associated with pH in sediments found in the area. This constitutes the first and main factor. The second factor accounts for 12.830% of the total variance and is characterized by high loadings of K and partial % slit. These two factors indicate that variation of activity concentration is due to physicochemical properties. Figure 9 shows that rotated components of variables.

Fig. 9
figure 9

Rotated components of variables and radioactivity

Hierarchical cluster analysis (HCA)

The mean or the K-neighbor of the samples has been taken into account to find the distance between the sample data in the process of HCA. Often PCA-generated scores or scaled original data are used to HCA. The samples are classified into homogeneous groups based on some criteria, and a numerical method is adopted. A dendrogram shown in Fig. 10 is plotted based on the distance calculations done.

Fig. 10
figure 10

Dendrogram of radioactive variables

Cluster I contains % sand, EC, % clay, pH, 238U, 232Th, % slit, whereas cluster II contains only 40K. From the cluster analysis result, it can be said that there is a strong correlation between radionuclides and physicochemical pair, which is a good agreement with factor, but cluster analysis results did not show a good agreement between K and physicochemical properties pair. This result suggests that the strong relationship between activity concentration and physicochemical properties.

Conclusion

The obtained results of magnetic parameters with the physicochemical parameters in sediments showed that its value decreases in grain size. The heavy metal analysis with physicochemical parameters indicated that the increase in metal concentration leads to raise of percentage of sediment texture values. The natural radioactivity concentration with physicochemical parameters analysis suggested that the strong relationship between them.

With the results obtained, it can be concluded that both spectroscopy and multivariate analysis can be used in conjunction effectively. The use of texture analysis helps largely in studying sediment properties more easily. This in turn aids studies in several areas of agriculture, mineralogy, and geophysics.