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Real Time-PCR coupled with melt curve analysis for detecting the authenticity of camel milk

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Abstract

The study evaluated the use of Real Time-Polymerase Chain Reaction (RT- PCR) to detect the adulteration of camel milk with goat, cow milk. DNA was isolated from camel milk, camel milk powder, camel milk soap, cow milk, and goat milk using DNA extraction kit. RT- PCR amplified a single piece of DNA into millions of copies. The camel specific primers were designed using the primer- 3 online software and quantification of the isolated DNA was carried out by RT- PCR system through DNA standard curves and cycle threshold (Ct) values. The detection limit of DNA template was in the range of 0.001–0.002%. The reaction mixture (20μL) contained 10 μL SYBR Green master mix, 0.3 μL of 10 μM of each primer and 5 μL DNA. Thermal cycling consisted of an initial denaturation at 95 °C for 1 min, followed by 40 cycles for 15 s at 95 °C and 60 °C for 30 s. The primer pairs used were confirmed for their PCR efficiency, and specific products were evaluated by melt curve analysis. Results indicated positive amplification for the camel milk, camel milk powder, and camel milk soap but negative amplification for cow and goat milk. In conclusion, the RT- PCR based identification is a low cost and appropriate method for camel milk and its products. Although, the yield of DNA from camel milk soap after isolation is low but the isolated DNA segment was easily identified.

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Abbreviations

SDS-PAGE:

Sodium dodecyl sulphate–polyacrylamide gel electrophoresis

ELISA:

Enzyme linked immunosorbent assay

DNA:

Deoxyribonucleic acid

RNA:

Ribonucleic acid

PCR:

Polymerase chain reaction

RT-PCR:

Real time-polymerase chain reaction

RFLP:

Restriction fragment length polymorphism

RAPD:

Random amplification of polymorphic DNA

AFLP:

Amplified fragment length polymorphism

NCBI:

National center for biotechnology information

LOD:

Limit of detection

Ct:

Cycle threshold

NTC:

No template control

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Acknowledgements

The authors would like to acknowledge the technical assistance provided by Dr. Karn Pratap Singh, Sr. Scientist, DSS Imagetech Pvt. Ltd. New Delhi.

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Authors

Contributions

Research study was conducted by Wajeehah Wajahat, Research study was designed and guided by Dr. Z.R Azaz Ahmad Azad, Paper was written and data analysed by Sadaf Nazir, Paper was further modified for language and analysed for data by Gazia Nasir.

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Correspondence to Z. R. Azaz Ahmad Azad.

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Web-based software Primer3 open source software (v. 0.4.0, http://primer3.sourceforge.net).

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Wajahat, W., Azad, Z.R.A.A., Nazir, S. et al. Real Time-PCR coupled with melt curve analysis for detecting the authenticity of camel milk. J Food Sci Technol 59, 1538–1548 (2022). https://doi.org/10.1007/s13197-021-05164-8

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  • DOI: https://doi.org/10.1007/s13197-021-05164-8

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