Abstract
The sophistication and revolution in genome editing and manipulation have revolutionized livestock by harvesting essential biotechnological products such as drugs, proteins, and serum. It laid down areas for the large production of transgenic food, resistance against certain diseases such as mastitis, and large production of milk and leaner meat. Nowadays, the increasing demand for animal food and protein is fulfilled using genome-editing technologies. The recent genome-editing techniques have overcome the earlier methods of animal reproduction, such as cloning and artificial embryo transfer. The genome of animals now is modified using the recent alteration techniques such as ZFNs, TALENS technique, and clustered regularly interspaced short palindromic repeats/Cas9 (CRISPR-Cas9) system. The literature was illustrated for identifying the researchers to address the advances and perspectives in the application of Cas9 in Livestock. Cas9 is considered better than the previously identified techniques in livestock because of the production of resilience against diseases, improvement of reproductive traits, and animal production to act as a model biomedical research.
Similar content being viewed by others
References
Shah, U. N., Gnanasekaran, S., Mondal, S., Reddy, I., Nandi, S., Gupta, P. and Das, D. (2021). RNAi for livestock improvement. Advances in Animal Genomics, Elsevier, pp. 91–107
Sinha, R., & Shukla, P. (2019). Current trends in protein engineering: Updates and progress. Current Protein and Peptide Science, 20, 398–407.
Gupta, S. K., & Shukla, P. (2017). Gene editing for cell engineering: Trends and applications. Critical Reviews in Biotechnology, 37, 672–684.
Tyagi, S., Choudhary, R., Das, A., Won, S. Y., & Shukla, P. (2020). CRISPR-Cas9 system: A genome-editing tool. Journal of Biotechnology, 319, 36.
Islam, M., Rony, S. A., Rahman, M. B., Cinar, M. U., Villena, J., Uddin, M. J., & Kitazawa, H. (2020). Improvement of disease resistance in livestock: Application of immunogenomics and CRISPR/Cas9 technology. Animals, 10, 2236.
Menchaca, A., dos Santos-Neto, P., Mulet, A., & Crispo, M. (2020). New insights and current tools for genetically engineered (GE) sheep and goats. Theriogenology, 86, 160–169.
Foulkes, A. L., Soda, T., Farrell, M., Giusti-Rodríguez, P., & Lázaro-Muñoz, G. (2019). Legal and ethical implications of CRISPR applications in psychiatry. North Carolina Law Review, 97, 1359.
Xie, K., Zhang, J., & Yang, Y. (2014). Genome-wide prediction of highly specific guide RNA spacers for CRISPR–Cas9-mediated genome editing in model plants and major crops. Molecular Plant, 7, 923–926.
Mali, F. (2020). Is the patent system the way forward with the CRISPR-Cas 9 technology? Science & Technology Studies, 33, 2–23.
Onteru, S. K., Ampaire, A., & Rothschild, M. F. (2010). Biotechnology developments in the livestock sector in developing countries. Biotechnology and Genetic Engineering Reviews, 27, 217–228.
Green, M. R., & Sambrook, J. (2018). The basic polymerase chain reaction (PCR). Cold Spring Harbor Protocol, 2018, 5. https://doi.org/10.1101/pdb.prot095117
Wen, H., Vuitton, L., Tuxun, T., Li, J., Vuitton, D. A., Zhang, W., & McManus, D. P. (2019). Echinococcosis: Advances in the 21st century. Clinical Microbiology Reviews, 32, e00075.
Wang, N., Wang, Y., Ye, Q., Yang, Y., Wan, J., Guo, C., Zhan, J., Gu, X., Lai, W., & Xie, Y. (2018). Development of a direct PCR assay to detect Taenia multiceps eggs isolated from dog feces. Veterinary Parasitology, 251, 7–11.
García-Sancho, M. (2015). Animal breeding in the age of biotechnology: The investigative pathway behind the cloning of Dolly the sheep. History and Philosophy of the Life Sciences, 37, 282–304.
Mondal, S., Mor, A., Reddy, I., Nandi, S., Gupta, P., & Mishra, A. (2019). In vitro embryo production in sheep. In comparative embryo culture (pp. 131–140). New York: Springer.
Su, Y., Zhu, J., Salman, S., & Tang, Y. (2020). Induced pluripotent stem cells from farm animals. Journal of Animal Science, 98, 343.
Soto, D. A., & Ross, P. J. (2016). Pluripotent stem cells and livestock genetic engineering. Transgenic Research, 25, 289–306.
Carlson, D. F., Tan, W., Lillico, S. G., Stverakova, D., Proudfoot, C., Christian, M., Voytas, D. F., Long, C. R., Whitelaw, C. B. A., & Fahrenkrug, S. C. (2012). Efficient TALEN-mediated gene knockout in livestock. Proceedings of the National Academy of Sciences, 109, 17382–17387.
Proudfoot, C., Carlson, D. F., Huddart, R., Long, C. R., Pryor, J. H., King, T. J., Lillico, S. G., Mileham, A. J., McLaren, D. G., & Whitelaw, C. B. A. (2015). Genome edited sheep and cattle. Transgenic Research, 24, 147–153.
Lee, K., Uh, K., & Farrell, K. (2020). Current progress of genome editing in livestock. Theriogenology, 150, 229–235.
Carroll, D. (2011). Genome engineering with zinc-finger nucleases. Genetics, 188, 773–782.
Liu, X., Wang, Y., Tian, Y., Yu, Y., Gao, M., Hu, G., Su, F., Pan, S., Luo, Y., & Guo, Z. (2014). Generation of mastitis resistance in cows by targeting human lysozyme gene to β-casein locus using zinc-finger nucleases. Proceedings of the Royal Society B Biological Sciences, 281, 20133368.
Luo, Y., Wang, Y., Liu, J., Cui, C., Wu, Y., Lan, H., Chen, Q., Liu, X., Quan, F., & Guo, Z. (2016). Generation of TALE nickase-mediated gene-targeted cows expressing human serum albumin in mammary glands. Scientific Reports, 6, 1–11.
Broeders, M., Herrero-Hernandez, P., Ernst, M. P., van der Ploeg, A. T., & Pijnappel, W. P. (2020). Sharpening the molecular scissors: Advances in gene-editing technology. iScience, 23(1), 100789.
Su, X., Cui, K., Du, S., Li, H., Lu, F., Shi, D., & Liu, Q. (2018). Efficient genome editing in cultured cells and embryos of Debao pig and swamp buffalo using the CRISPR/Cas9 system. Vitro Cellular & Developmental Biology-Animal, 54, 375–383.
Ruan, J., Xu, J., Chen-Tsai, R. Y., & Li, K. (2017). Genome editing in livestock: Are we ready for a revolution in animal breeding industry? Transgenic Research, 26, 715–726.
Gao, Y., Wu, H., Wang, Y., Liu, X., Chen, L., Li, Q., Cui, C., Liu, X., Zhang, J., & Zhang, Y. (2017). Single Cas9 nickase induced generation of NRAMP1 knockin cattle with reduced off-target effects. Genome Biology, 18, 1–15.
Whitworth, K. M., Rowland, R. R., Ewen, C. L., Trible, B. R., Kerrigan, M. A., Cino-Ozuna, A. G., Samuel, M. S., Lightner, J. E., McLaren, D. G., & Mileham, A. J. (2015). Gene-edited pigs are protected from porcine reproductive and respiratory syndrome virus. Nature Biotechnology, 34, 20.
Bi, Y., Hua, Z., Liu, X., Hua, W., Ren, H., Xiao, H., Zhang, L., Li, L., Wang, Z., & Laible, G. (2016). Isozygous and selectable marker-free MSTN knockout cloned pigs generated by the combined use of CRISPR/Cas9 and Cre/LoxP. Scientific Reports, 6, 1–12.
Guo, R., Wan, Y., Xu, D., Cui, L., Deng, M., Zhang, G., Jia, R., Zhou, W., Wang, Z., & Deng, K. (2016). Generation and evaluation of Myostatin knock-out rabbits and goats using CRISPR/Cas9 system. Scientific Reports, 6, 1–10.
Ni, W., Qiao, J., Hu, S., Zhao, X., Regouski, M., Yang, M., Polejaeva, I. A., & Chen, C. (2014). Efficient gene knockout in goats using CRISPR/Cas9 system. PLoS ONE, 9, e106718.
Wang, X., Yu, H., Lei, A., Zhou, J., Zeng, W., Zhu, H., Dong, Z., Niu, Y., Shi, B., & Cai, B. (2015). Generation of gene-modified goats targeting MSTN and FGF5 via zygote injection of CRISPR/Cas9 system. Scientific Reports, 5, 1–9.
Yu, B., Lu, R., Yuan, Y., Zhang, T., Song, S., Qi, Z., Shao, B., Zhu, M., Mi, F., & Cheng, Y. (2016). Efficient TALEN-mediated myostatin gene editing in goats. BMC Developmental Biology, 16, 1–8.
Wells, K. D., & Prather, R. S. (2017). Genome-editing technologies to improve research, reproduction, and production in pigs. Molecular Reproduction and Development, 84, 1012–1017.
Park, K.-E., Kaucher, A. V., Powell, A., Waqas, M. S., Sandmaier, S. E., Oatley, M. J., Park, C.-H., Tibary, A., Donovan, D. M., & Blomberg, L. A. (2017). Generation of germline ablated male pigs by CRISPR/Cas9 editing of the NANOS2gene. Scientific Reports, 7, 1–9.
Butler, J. R., Martens, G. R., Estrada, J. L., Reyes, L. M., Ladowski, J. M., Galli, C., Perota, A., Cunningham, C. M., Tector, M., & Tector, A. J. (2016). Silencing porcine genes significantly reduces human-anti-pig cytotoxicity profiles: An alternative to direct complement regulation. Transgenic Research, 25, 751–759.
Hauschild, J., Petersen, B., Santiago, Y., Queisser, A.-L., Carnwath, J. W., Lucas-Hahn, A., Zhang, L., Meng, X., Gregory, P. D., & Schwinzer, R. (2011). Efficient generation of a biallelic knockout in pigs using zinc-finger nucleases. Proceedings of the National Academy of Sciences, 108, 12013–12017.
Petersen, B., Frenzel, A., Lucas-Hahn, A., Herrmann, D., Hassel, P., Klein, S., Ziegler, M., Hadeler, K. G., & Niemann, H. (2016). Efficient production of biallelic GGTA 1 knockout pigs by cytoplasmic microinjection of CRISPR/Cas9 into zygotes. Xenotransplantation, 23, 338–346.
Reyes, L. M., Estrada, J. L., Wang, Z. Y., Blosser, R. J., Smith, R. F., Sidner, R. A., Paris, L. L., Blankenship, R. L., Ray, C. N., & Miner, A. C. (2014). Creating class I MHC–null pigs using guide RNA and the Cas9 endonuclease. The Journal of Immunology, 193, 5751–5757.
Wang, Y., Du, Y., Zhou, X., Wang, L., Li, J., Wang, F., Huang, Z., Huang, X., & Wei, H. (2016). Efficient generation of B2m-null pigs via injection of zygote with TALENs. Scientific Reports, 6, 38854.
Burkard, C., Lillico, S. G., Reid, E., Jackson, B., Mileham, A. J., Ait-Ali, T., Whitelaw, C. B. A., & Archibald, A. L. (2017). Precision engineering for PRRSV resistance in pigs: macrophages from genome edited pigs lacking CD163 SRCR5 domain are fully resistant to both PRRSV genotypes while maintaining biological function. PLoS Pathogens, 13, e1006206.
Hai, T., Teng, F., Guo, R., Li, W., & Zhou, Q. (2014). One-step generation of knockout pigs by zygote injection of CRISPR/Cas system. Cell Research, 24, 372–375.
Petersen, B. (2017). CRISPR/Cas9-mediated MSTN disruption accelerates the growth of Chinese Bama pigs. Reproduction in Domestic Animals, 52, 4–13.
Kalds, P., Zhou, S., Cai, B., Liu, J., Wang, Y., Petersen, B., Sonstegard, T., Wang, X., & Chen, Y. (2019). Sheep and goat genome engineering: From random transgenesis to the CRISPR era. Frontiers in Genetics, 10, 750.
Zhang, X., Li, W., Liu, C., Peng, X., Lin, J., He, S., Li, X., Han, B., Zhang, N., & Wu, Y. (2017). Alteration of sheep coat color pattern by disruption of ASIP gene via CRISPR Cas9. Scientific Reports, 7, 1–10.
Williams, D. K., Pinzón, C., Huggins, S., Pryor, J. H., Falck, A., Herman, F., Oldeschulte, J., Chavez, M. B., Foster, B. L., & White, S. H. (2018). The DREADD agonist clozapine N-oxide (CNO) is reverse-metabolized to clozapine and produces clozapine-like interoceptive stimulus effects in rats and mice. Scientific Reports, 8, 1–10.
Crispo, M., Mulet, A., Tesson, L., Barrera, N., Cuadro, F., dos Santos-Neto, P., Nguyen, T., Crénéguy, A., Brusselle, L., & Anegón, I. (2015). Efficient generation of myostatin knock-out sheep using CRISPR/Cas9 technology and microinjection into zygotes. PLoS ONE, 10, e0136690.
Li, X., Hao, F., Hu, X., Wang, H., Dai, B., Wang, X., Liang, H., Cang, M., & Liu, D. (2019). Generation of Tβ4 knock-in cashmere goat using CRISPR/Cas9. International Journal of Biological Sciences, 15, 1743.
Tian, H., Luo, J., Zhang, Z., Wu, J., Zhang, T., Busato, S., Huang, L., Song, N., & Bionaz, M. (2018). CRISPR/Cas9-mediated Stearoyl-CoA Desaturase 1 (SCD1) deficiency affects fatty acid metabolism in goat mammary epithelial cells. Journal of Agricultural and Food Chemistry, 66, 10041–10052.
Niu, D., Wei, H.-J., Lin, L., George, H., Wang, T., Lee, I.-H., Zhao, H.-Y., Wang, Y., Kan, Y., & Shrock, E. (2017). Inactivation of porcine endogenous retrovirus in pigs using CRISPR-Cas9. Science, 357, 1303–1307.
Yang, H., & Wu, Z. (2018). Genome editing of pigs for agriculture and biomedicine. Frontiers in Genetics, 9, 360.
Kurtz, S., & Petersen, B. (2019). Pre-determination of sex in pigs by application of CRISPR/Cas system for genome editing. Theriogenology, 137, 67–74.
Zheng, Q., Lin, J., Huang, J., Zhang, H., Zhang, R., Zhang, X., Cao, C., Hambly, C., Qin, G., & Yao, J. (2017). Reconstitution of UCP1 using CRISPR/Cas9 in the white adipose tissue of pigs decreases fat deposition and improves thermogenic capacity. Proceedings of the National Academy of Sciences, 114, E9474–E9482.
Van Eenennaam, A. L. (2019). Application of genome editing in farm animals: Cattle. Transgenic Research, 28, 93–100.
Yum, S.-Y., Youn, K.-Y., Choi, W.-J., & Jang, G. (2018). Development of genome engineering technologies in cattle: From random to specific. Journal of Animal Science and Biotechnology, 9, 1–9.
Miller, B. A., & Lu, C. D. (2019). Current status of global dairy goat production: An overview. Asian-Australasian Journal of Animal Sciences, 32, 1219.
Virtanen, A. I. (1966). Milk production of cows on protein-free feed. Science, 153, 1603–1614.
Ikeda, M., Matsuyama, S., Akagi, S., Ohkoshi, K., Nakamura, S., Minabe, S., Kimura, K., & Hosoe, M. (2017). Harnessing endogenous repair mechanisms for targeted gene knock-in during pre-implantation development of bovine embryos. Scientific Reports, 7, 1–9.
Acknowledgements
We would like to express our full acknowledgment to BioRender [https://biorender.com/] as an online tool for creating the figures in this review.
Author information
Authors and Affiliations
Contributions
HIA: designed the study, Primary draft was made by FZ, M, MHZ, ASUD, MAK, and AJ. NM: designed the figures. The manuscript was revised by AJ, MAK. All authors read the manuscript and have no conflict of interest.
Corresponding author
Ethics declarations
Conflict of Interest
The authors declare no conflict of interest.
Additional information
Publisher's Note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Rights and permissions
About this article
Cite this article
Jabbar, A., Zulfiqar, F., Mahnoor, M. et al. Advances and Perspectives in the Application of CRISPR-Cas9 in Livestock. Mol Biotechnol 63, 757–767 (2021). https://doi.org/10.1007/s12033-021-00347-2
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s12033-021-00347-2