Abstract
A novel marine genus, Halobyssothecium (Lentitheciaceae), is introduced to accommodate Byssothecium obiones (= Halobyssothecium obiones) with evidence from phylogenetic analyses of concatenated LSU, SSU, ITS rDNA, and TEF1 sequence data. We could not locate any type material for this species and there is no molecular data available for the type of this species. Therefore, an epitype is designated for the precise delineation of this taxon. A detailed morphological description and DNA characterization based on LSU, SSU, ITS rDNA, and TEF1 sequence data are provided for the epitype, obtained from Spartina culms in Eastney, Langstone Harbour, Hampshire, UK.
Similar content being viewed by others
References
Apinis AE, Chesters CGC (1964) Ascomycetes of some salt marshes and sand dunes. Trans Br Mycol Soc 47(3):419–435
Ariyawansa HA, Hawksworth DL, Hyde KD et al (2014) Epitypification and neotypification: guidelines with appropriate and inappropriate examples. Fungal Divers 69:57–91
Atlas RM (2006) The handbook of microbiological media for the examination of food: 314. CRC Press, pp 314
Barata M (1997) Fungos marinhos superiores associados a Spartina maritima em Estuários da Costa Portuguesa. Ph.D. Thesis, Faculty of Sciences of University of Lisbon
Barata M (2002) Fungi on the halophyte Spartina maritima in salt marshes. In: Hyde KD (ed) Fungi in marine environments. Fungal Diversity Research Series 7, Hong Kong, pp 179–193
Barr ME (2002) Teichosporaceae, another family in the Pleosporales. Mycotaxon 72:373–389
Boise J (1983) On Trematosphaeria circinans and Reinstatement of the Genus Byssothecium. Mycologia 75(4):666–669
Cavaliere AR (1968) Marine fungi of Iceland: a preliminary account of Ascomycetes. Mycologia 475–479
Chomnunti P, Hongsanan S, Aguirre-Hudson B et al (2014) The sooty moulds. Fungal Divers 66:1–36
Cribb AB, Cribb JW (1960) Marine fungi from Queensland III. Univ Queensl Pap Dep Bot 4(3):42–44
Crouan PL, Crouan HM (1867) Florule du Finistère: Contenant les descriptions de 360 espèces nouvelles de sporagames, de nombreuses observations et une synonymie des plantes cellulaires et vasculaires qui croissent spontanément dans ce département; accompagnées de trente-deux planches où est représentée l’organographie, faite sur l’état vif. des fruits et des tissus de 198 genres d’algues avec la plante grandeur naturelle ou réduite plus une planche supplémentiare ou sont figurés 24 champignons nouveaux. F. Klincksieck, pp 22
Dayarathne MC, Boonmee S, Braun U, Crous PW et al (2016) Taxonomic utility of old names in current fungal classification and nomenclature: conflicts, confusion & clarifications. Mycosphere 7(11):1622–1648
Figueira D, Barata M (2007) Marine fungi from two sandy beaches in Portugal. Mycologia 99(1):20–23
Gessner RV (1972) Fungi associated with Spartina alterrziflora and other salt marsh plants from southern Rhode Island. M.Sc. Thesis, University of Rhode Island, Kingston, R.I
Gessner RV, Goos RD (1973) Fungi from decomposing Spartina alterniflora. Can J Bot 51:51–55
Grove WB (1933) New or noteworthy fungi. XIII. The London Journal of Botany 71:251–259
Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41:95–98
Holm L (1957) Etudes taxonomiques sur les Pleosporacees. Symb bot upsal 14(3):5–188
Huelsenbeck JP, Ronquist F (2001) MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17(8):754–755
Hyde KD, Mouzouras R (1988) Passeriniella savoryellopsis sp. nov., a new ascomycete from intertidal mangrove wood. Trans Br Mycol Soc 91:179–185
Index Fungorum (2018) http://www.indexfungorum.org/Names/Names.asp. (accessed: January 2018).
Jayasiri SC, Hyde KD, Ariyawansa HA et al (2015) The Faces of Fungi database: fungal names linked with morphology, phylogeny and human impacts. Fungal Divers 74:3–18
Johnson TW (1956) Marine fungi. II. Ascomycetes and Deuteromycetes from submerged wood. Mycologia 48:841–851.
Jones EBG (1962) Marine fungi. Trans Br Mycol Soc 45:93–114
Jones EBG (1963) Marine fungi: II. Ascomycetes and deuteromycetes from submerged wood and drift Spartina. Trans Br Mycol Soc 46:135–144.
Jones EBG, Suetrong S, Sakayaroj J et al (2015) Classification of marine Ascomycota, Basidiomycota, Blastocladiomycota and Chytridiomycota. Fungal Divers 73:1–72
Katoh K, Standley DM (2013) MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Mol Biol Evol 30(4):772–780
Khashnobish A, Shearer CA (1996a) Re-examination of some Leptosphaeria and Phaeosphaeria species, Passeriniella obiones and Melanomma radicans. Mycol Res 100:1341–1354
Khashnobish A, Shearer CA (1996b) Phylogenetic relationships in some Leptosphaeria and Phaeosphaeria species. Mycol Res 100:1355–1363
Kishino H, Hasegawa M (1989) Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea. J Mol Evol 29(2):170–179
Knapp DG, Kovács GM, Zajta E, Groenewald JZ, Crous PW (2015) Dark septate endophytic pleosporalean genera from semiarid areas. Persoonia 35:87–100
Kohlmeyer J, Kohlmeyer E (1979) Marine Mycology. The Higher Fungi. Academic Press, New York
Lucas MT, Webster J (1967) Conidial states of British species of Leptosphaeria. Trans Br Mycol Soc 50:85–121
Miller SL, Maner JK (2010) Evolution and relationship maintenance: fertility cues lead committed men to devalue relationship alterna-tives. J Exp Soc Psychol 46(6):1081–1084
Peña NI, Arambarri AM (1998) Hongos marinos lignı!colas de la laguna costera de Mar Chiquita (Provincia de Buenos Aires, Argentina). I. Ascomycotina y Deuteromycotina sobre Spartina densiflora. Darwiniana 35:61–67
Phookamsak R, Manamgoda DS, Li WJ, Dai DQ et al (2015) Poaceascoma helicoides gen et sp. nov., a new genus with scolecospores in Lentitheciaceae. Cryptogamie, Mycologie 36(2):213–224
Rambaut A (2012) Fig.Tree. Tree Fig. Drawing Tool, v. 1.4.0 http://tree.bio.ed.ac.uk/software/figtree/
Rehner SA, Buckley E (2005) A Beauveria phylogeny inferred from nuclear ITS and EF1-α sequences: evidence for cryptic diversification and links to Cordyceps teleomorphs. Mycologia 97:84–98
Rehner SA, Samuels GJ (1994) Taxonomy and phylogeny of Gliocladium analysed from nuclear large subunit ribosomal DNA sequences. Mycological Research 98(6):625–634
Saccardo PA (1944) Sylloge Fungorum, Omnium Hucuque cognitorum. Published by Edwards Brothers. Inc. Ann Arbor Michigan 6(25):1–929.
Stamatakis A (2014) RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30(9):1312–1313
Stamatakis A, Hoover P, Rougemont J (2008) A rapid bootstrap algorithm for the RAxML web servers. Syst Biol 57(5):758–771
Suetrong S, Schoch CL, Spatafora JW, Kohlmeyer J et al (2009) Molecular systematics of the marine Dothideomycetes. Stud Mycol 64:155–173
Swofford DL, Documentation B (2002) Phylogenetic analysis using par-simony. Sinauer Associates Inc, software, Sunderland
Tanaka K, Hirayama K, Yonezawa H, Sato G, Toriyabe A, Kudo H, Hashimoto A, Matsumura M, Harada Y, Kurihara Y, Shirouzu T (2015) Revision of the Massarineae (Pleosporales, Dothideomycetes). Stud Mycol 82:75–136
Vilgalys R, Hester M (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bacteriol 172:4239–4246
Wagner DT (1965) Developmental morphology of Leptosphaeria discors (Saccardo and Ellis) Saccardo and Ellis. Nova Hedwigia 9:45–61
Wanasinghe DN, Jones EG, Camporesi E, Boonmee S, Ariyawansa HA, Wijayawardene NN, Hyde KD (2014) An exciting novel member of Lentitheciaceae in Italy from Clematis vitalba. Cryptogam Mycol 35(4):323–337
Wanasinghe DN, Phukhamsakda C, Hyde KD et al (2018) Fungal diversity notes 709–839: taxonomic and phylogenetic contributions to fungal taxa with an emphasis on fungi on Rosaceae. Fungal Divers 89(1):1–236
Webber EE (1970) Marine Ascomycetes from New England. Bull Torrey Bot Club 97(2):119–120
White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: PCR protocols: a guide to methods and applications (Innis MA, Gelfand DH, Snisky JS, White TJ, eds): San Diego Academic Press, pp 315–322.
Wijayawardene NN, Hyde KD, Bhat DJ, Goonasekara ID, Nadeeshan D, Camporesi E, Wang Y (2015) Additions to brown spored coelomycetous taxa in Massarinae, Pleosporales: introducing Phragmocamarosporium gen. nov. and Suttonomyces gen. nov. Cryptogam, Mycol 36(2):213–224
Wijayawardene NN, Hyde KD, Lumbsch T, Liu JK, Maharachchikumbura SSN, Ekanayaka AH, Tian Q, Phookamsak R (2018) Outline of Ascomycota – 2017. Fungal Divers 88:167–263
Zhang Y, Schoch CL, Fournier J, Crous PW, De Gruyter J, Woudenberg JHC, Hirayama K, Tanaka K, Pointing SB, Spatafora JW, Hyde KD (2009) Multi-locus phylogeny of Pleosporales: a taxonomic, ecological and evolutionary re-evaluation. Stud Mycol 64:85–102
Zhaxybayeva O, Gogarten JP (2002) Bootstrap, Bayesian probability and maximum likelihood mapping: exploring new tools for comparative genome analyses. BMC Genomics 3(1):4
Acknowledgements
We are grateful to the Thailand Research Fund (TRF) grant no. MRG6080089 entitled; Taxonomy and phylogeny of foliar fungi from Mangrove. Thailand Research Fund (TRF) grant no. RSA5980068 entitled Biodiversity, phylogeny and role of fungal endophytes on above parts of Rhizophora apiculata and Nypa fruticans; National Research Council of Thailand (NRCT) for a grant entitled Diseases of mangrove trees and maintenance of good forestry practice (Grant number: 60201000201). Prof. Jianchu Xu is acknowledged for providing laboratory facilities for the molecular work. Monika Dayarathne offers her deepest gratitude to Dr. Sajeewa S. N. Maharachchikumbura and Dr. Rungtiwa Phookamsak for their helpful comments and advices.
Author information
Authors and Affiliations
Corresponding author
Additional information
Section Editor: Roland Kirschner
Rights and permissions
About this article
Cite this article
Dayarathne, M.C., Wanasinghe, D.N., Jones, E.B.G. et al. A novel marine genus, Halobyssothecium (Lentitheciaceae) and epitypification of Halobyssothecium obiones comb. nov.. Mycol Progress 17, 1161–1171 (2018). https://doi.org/10.1007/s11557-018-1432-3
Received:
Revised:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s11557-018-1432-3