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Characterization, promoter analysis and expression of the interleukin-6 gene in blunt snout bream, Megalobrama amblycephala

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Abstract

Interleukin-6 (IL-6) is one of the most important multifunctional cytokines, playing essential roles in mediating the innate and adaptive immune responses. In this study, il-6 gene and its promoter from blunt snout bream, Megalobrama amblycephala, were characterized, and its expression at the transcript level in healthy fish and after bacterial infection was determined by quantitative real-time PCR. The results showed that the M. amblycephala il-6 (Mamil-6) cDNA had an ORF of 699 bp, encoding 232 amino acids, and contained 9 instable motifs in the 3′ UTR. The deduced MamIL-6 possessed a 24-amino acid signal peptide and was located in the cytoplasm. Although sequence alignment and phylogenetic analysis revealed that IL-6 is poorly conserved in vertebrates, the protein and genomic structure of il-6 gene was well conserved. Analysis of the Mamil-6 promoter revealed the presence of a conserved TATA box and six major cis-regulatory elements, including C/EBPβ (NF-IL6), AP-1, CRE, GRE, GATA and NF-κB binding sites. In healthy fish, Mamil-6 was the most abundant in the spleen. After Aeromonas hydrophila infection, Mamil-6 was significantly up-regulated in all 6 immune-related tissues examined, suggesting that Mamil-6 plays an important role in the blunt snout bream immune system.

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Acknowledgments

This project was supported by grants from the Key Technologies R&D Program of China (No. 2012BAD26B00), Fundamental Research Funds for the Central Universities (Nos. 2014PY042, 2013PY067) and Modern Agroindustry Technology Research System entitled “Staple Freshwater Fishery Industry Technology System” (No. CARS-46-05). The authors thank Dr. Hongtao Hu for helpful comments on the manuscript.

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Correspondence to Hong Liu.

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Fu, X., Ding, Z., Fan, J. et al. Characterization, promoter analysis and expression of the interleukin-6 gene in blunt snout bream, Megalobrama amblycephala . Fish Physiol Biochem 42, 1527–1540 (2016). https://doi.org/10.1007/s10695-016-0238-y

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