Abstract
Artificial microRNA (amiRNA) is a powerful tool for silencing genes in many plant species. Here we provide an easy method to construct amiRNA vectors that reinvents the Golden Gate cloning approach and features a novel system called top speed amiRNA construction (TAC). This speedy approach accomplishes one restriction-ligation step in only 5 min, allowing easy and high-throughput vector construction. Three primers were annealed to be a specific adaptor, then digested and ligated on our novel vector pTAC. Importantly, this method allows the recombined amiRNA constructs to maintain the precursor of osa-miR528 with exception of the desired amiRNA/amiRNA* sequences. Using this method, our results showed the expected decrease of targeted genes in Nicotiana benthamiana and Oryza sativa.
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References
Bernard P, Couturier M (1992) Cell killing by the F plasmid CcdB protein involves poisoning of DNA-topoisomerase II complexes. J Mol Biol 226:735–745
Bologna NG, Mateos JL, Bresso EG, Palatnik JF (2009) A loop-to-base processing mechanism underlies the biogenesis of plant microRNAs miR319 and miR159. EMBO J 28:3646–3656
Chen S, Songkumarn P, Liu J, Wang GL (2009) A versatile zero background T-vector system for gene cloning and functional genomics. Plant Physiol 150:1111–1121
Dong J, Teng W, Buchholz WG, Hall TC (1996) Agrobacterium-mediated transformation of Javanica rice. Mol Breed 2:267–276
Engler C, Kandzia R, Marillonnet S (2008) A one pot, one step, precision cloning method with high throughput capability. PLoS One 3:e3647
Jefferson RA, Kavanagh TA, Bevan MW (1987) GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J 6:3901–3907
Kleid D, Humayun Z, Jeffrey A, Ptashne M (1976) Novel properties of a restriction endonuclease isolated from Haemophilus parahaemolyticus. Proc Natl Acad Sci U S A 73:293–297
Kotera I, Nagai T (2008) A high-throughput and single-tube recombination of crude PCR products using a DNA polymerase inhibitor and type IIS restriction enzyme. J Biotechnol 137:1–7
Liu C, Zhang L, Sun J, Luo Y, Wang MB, Fan YL, Wang L (2010) A simple artificial microRNA vector based on ath-miR169d precursor from Arabidopsis. Mol Biol Rep 37:903–909
Schwab R, Ossowski S, Riester M, Warthmann N, Weigel D (2006) Highly specific gene silencing by artificial microRNAs in Arabidopsis. Plant Cell 18:1121–1133
Sparkes IA, Runions J, Kearns A, Hawes C (2006) Rapid, transient expression of fluorescent fusion proteins in tobacco plants and generation of stably transformed plants. Nat Protoc 1:2019–2025
Weber E, Gruetzner R, Werner S, Engler C, Marillonnet S (2011) Assembly of designer TAL effectors by Golden Gate cloning. PLoS One 6:e19722
Yan F, Lu Y, Wu G, Peng J, Zheng H, Lin L, Chen J (2012a) A simplified method for constructing artificial microRNAs based on the osa-MIR528 precursor. J Biotechnol 160:146–150
Yan P, Shen W, Gao X, Li X, Zhou P, Duan J (2012b) High-throughput construction of intron-containing hairpin RNA vectors for RNAi in plants. PLoS One 7:e38186
Zhang Q, Li J, Xue Y, Han B, Deng XW (2008) Rice 2020: a call for an international coordinated effort in rice functional genomics. Mol Plant 1:715–719
Zhou J, Yu F, Chen B, Wang X, Yang Y, Cheng Y, Yan C, Chen J (2013) Universal vectors for constructing artificial microRNAs in plants. Biotechnol Lett 35:1127–1133
Zuker M (2003) Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res 31:3406–3415
Acknowledgments
We really appreciate Professor Zhiyong Gao to provide us the N. benthamiana. This work was supported in part by the National Programme on Research and Development of Transgenic Plants (Grant No. 2011ZX08001-001), the National Natural Science Foundation of China for Innovative Research Team (Grant No. 30521004) and the Key Grant Project of Chinese Ministry of Education (Grant No. 313039).
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Yang Li and Yang Li have contributed equally to this work.
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Li, Y., Li, Y., Zhao, S. et al. A simple method for construction of artificial microRNA vector in plant. Biotechnol Lett 36, 2117–2123 (2014). https://doi.org/10.1007/s10529-014-1570-x
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DOI: https://doi.org/10.1007/s10529-014-1570-x