Skip to main content
Log in

A simple method for construction of artificial microRNA vector in plant

  • Original Research Paper
  • Published:
Biotechnology Letters Aims and scope Submit manuscript

Abstract

Artificial microRNA (amiRNA) is a powerful tool for silencing genes in many plant species. Here we provide an easy method to construct amiRNA vectors that reinvents the Golden Gate cloning approach and features a novel system called top speed amiRNA construction (TAC). This speedy approach accomplishes one restriction-ligation step in only 5 min, allowing easy and high-throughput vector construction. Three primers were annealed to be a specific adaptor, then digested and ligated on our novel vector pTAC. Importantly, this method allows the recombined amiRNA constructs to maintain the precursor of osa-miR528 with exception of the desired amiRNA/amiRNA* sequences. Using this method, our results showed the expected decrease of targeted genes in Nicotiana benthamiana and Oryza sativa.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3

Similar content being viewed by others

References

  • Bernard P, Couturier M (1992) Cell killing by the F plasmid CcdB protein involves poisoning of DNA-topoisomerase II complexes. J Mol Biol 226:735–745

    Article  CAS  PubMed  Google Scholar 

  • Bologna NG, Mateos JL, Bresso EG, Palatnik JF (2009) A loop-to-base processing mechanism underlies the biogenesis of plant microRNAs miR319 and miR159. EMBO J 28:3646–3656

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Chen S, Songkumarn P, Liu J, Wang GL (2009) A versatile zero background T-vector system for gene cloning and functional genomics. Plant Physiol 150:1111–1121

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Dong J, Teng W, Buchholz WG, Hall TC (1996) Agrobacterium-mediated transformation of Javanica rice. Mol Breed 2:267–276

    Article  CAS  Google Scholar 

  • Engler C, Kandzia R, Marillonnet S (2008) A one pot, one step, precision cloning method with high throughput capability. PLoS One 3:e3647

    Article  PubMed Central  PubMed  Google Scholar 

  • Jefferson RA, Kavanagh TA, Bevan MW (1987) GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J 6:3901–3907

    CAS  PubMed Central  PubMed  Google Scholar 

  • Kleid D, Humayun Z, Jeffrey A, Ptashne M (1976) Novel properties of a restriction endonuclease isolated from Haemophilus parahaemolyticus. Proc Natl Acad Sci U S A 73:293–297

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Kotera I, Nagai T (2008) A high-throughput and single-tube recombination of crude PCR products using a DNA polymerase inhibitor and type IIS restriction enzyme. J Biotechnol 137:1–7

    Article  CAS  PubMed  Google Scholar 

  • Liu C, Zhang L, Sun J, Luo Y, Wang MB, Fan YL, Wang L (2010) A simple artificial microRNA vector based on ath-miR169d precursor from Arabidopsis. Mol Biol Rep 37:903–909

    Article  CAS  PubMed  Google Scholar 

  • Schwab R, Ossowski S, Riester M, Warthmann N, Weigel D (2006) Highly specific gene silencing by artificial microRNAs in Arabidopsis. Plant Cell 18:1121–1133

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Sparkes IA, Runions J, Kearns A, Hawes C (2006) Rapid, transient expression of fluorescent fusion proteins in tobacco plants and generation of stably transformed plants. Nat Protoc 1:2019–2025

    Article  CAS  PubMed  Google Scholar 

  • Weber E, Gruetzner R, Werner S, Engler C, Marillonnet S (2011) Assembly of designer TAL effectors by Golden Gate cloning. PLoS One 6:e19722

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Yan F, Lu Y, Wu G, Peng J, Zheng H, Lin L, Chen J (2012a) A simplified method for constructing artificial microRNAs based on the osa-MIR528 precursor. J Biotechnol 160:146–150

    Article  CAS  PubMed  Google Scholar 

  • Yan P, Shen W, Gao X, Li X, Zhou P, Duan J (2012b) High-throughput construction of intron-containing hairpin RNA vectors for RNAi in plants. PLoS One 7:e38186

    Article  CAS  PubMed Central  PubMed  Google Scholar 

  • Zhang Q, Li J, Xue Y, Han B, Deng XW (2008) Rice 2020: a call for an international coordinated effort in rice functional genomics. Mol Plant 1:715–719

    Article  CAS  PubMed  Google Scholar 

  • Zhou J, Yu F, Chen B, Wang X, Yang Y, Cheng Y, Yan C, Chen J (2013) Universal vectors for constructing artificial microRNAs in plants. Biotechnol Lett 35:1127–1133

    Article  CAS  PubMed  Google Scholar 

  • Zuker M (2003) Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res 31:3406–3415

    Article  CAS  PubMed Central  PubMed  Google Scholar 

Download references

Acknowledgments

We really appreciate Professor Zhiyong Gao to provide us the N. benthamiana. This work was supported in part by the National Programme on Research and Development of Transgenic Plants (Grant No. 2011ZX08001-001), the National Natural Science Foundation of China for Innovative Research Team (Grant No. 30521004) and the Key Grant Project of Chinese Ministry of Education (Grant No. 313039).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Yangsheng Li.

Additional information

Yang Li and Yang Li have contributed equally to this work.

Electronic supplementary material

Below is the link to the electronic supplementary material.

Supplementary material 1 (DOCX 280 kb)

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Li, Y., Li, Y., Zhao, S. et al. A simple method for construction of artificial microRNA vector in plant. Biotechnol Lett 36, 2117–2123 (2014). https://doi.org/10.1007/s10529-014-1570-x

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s10529-014-1570-x

Keywords

Navigation