Abstract
For recombinant production of squalene, which is a triterpenoid compound with increasing industrial applications, in microorganisms generally recognized as safe, we screened Saccharomyces cerevisiae strains to determine their suitability. A strong strain dependence was observed in squalene productivity among Saccharomyces cerevisiae strains upon overexpression of genes important for isoprenoid biosynthesis. In particular, a high level of squalene production (400 ± 45 mg/L) was obtained in shake flasks with the Y2805 strain overexpressing genes encoding a bacterial farnesyl diphosphate synthase (ispA) and a truncated form of hydroxyl-3-methylglutaryl-CoA reductase (tHMG1). Partial inhibition of squalene epoxidase by terbinafine further increased squalene production by up to 1.9-fold (756 ± 36 mg/L). Furthermore, squalene production of 2011 ± 75 or 1026 ± 37 mg/L was obtained from 5-L fed-batch fermentations in the presence or absence of terbinafine supplementation, respectively. These results suggest that the Y2805 strain has potential as a new alternative source of squalene production.
Similar content being viewed by others
References
Asadollahi MA, Maury J, Schalk M, Clark A, Nielsen J (2010) Enhancement of farnesyl diphosphate pool as direct precursor of sesquiterpenes through metabolic engineering of the mevalonate pathway in Saccharomyces cerevisiae. Biotechnol Bioeng 106:86–96
Choi E-S, Sohn J-H, Rhee S-K (1994) Optimization of the expression system using galactose-inducible promoter for the production of anticoagulant hirudin in Saccharomyces cerevisiae. Appl Microbiol Biotechnol 42:587–594
Dai Z, Liu Y, Huang L, Zhang X (2012) Production of miltiradiene by metabolically engineered Saccharomyces cerevisiae. Biotechnol Bioeng 109:2845–2853
Dai Z, Liu Y, Zhang X, Shi M, Wang B, Wang D, Huang L, Zhang X (2013) Metabolic engineering of Saccharomyces cerevisiae for production of ginsenosides. Metab Eng 20:146–156
Dai Z, Wang B, Liu Y, Shi M, Wang D, Zhang X, Liu T, Huang L, Zhang X (2014) Producing aglycons of ginsenosides in bakers’ yeast. Sci Rep 4:3698
Daum G, Lees ND, Bard M, Dickson R (1998) Biochemistry, cell biology and molecular biology of lipids of Saccharomyces cerevisiae. Yeast 14:1471–1510
Desmaële D, Gref R, Couvreur P (2012) Squalenoylation: a generic platform for nanoparticular drug delivery. J Control Release 161:609–618
Drozdíková E, Garaiová M, Csáky Z, Obernauerová M, Hapala I (2015) Production of squalene by lactose-fermenting yeast Kluyveromyces lactis with reduced squalene epoxidase activity. Lett Appl Microbiol 61:77–84
Fox CB (2009) Squalene emulsions for parenteral vaccine and drug delivery. Molecules 14:3286–3312
Gao S, Tong Y, Zhu L, Ge M, Zhang Y, Chen D, Jiang Y, Yang S (2017) Iterative integration of multiple-copy pathway genes in Yarrowia lipolytica for heterologous β-carotene production. Metab Eng 41:192–201
Garaiová M, Zambojová V, Šimová Z, Griač P, Hapala I (2014) Squalene epoxidase as a target for manipulation of squalene levels in the yeast Saccharomyces cerevisiae. FEMS Yeast Res 14:310–323
Henderson CM, Zeno WF, Lerno LA, Longo ML, Block DE (2013) Fermentation temperature modulates phosphatidylethanolamine and phosphatidylinositol levels in the cell membrane of Saccharomyces cerevisiae. Appl Environ Microbiol 79:5345–5356
Holm C, Meeks-Wagner DW, Fangman WL, Botstein D (1986) A rapid, efficient method for isolating DNA from yeast. Gene 42:169–173
Hull CM, Loveridge EJ, Rolley NJ, Donnison IS, Kelly SL, Kelly DE (2014) Co-production of ethanol and squalene using a Saccharomyces cerevisiae ERG1 (squalene epoxidase) mutant and agro-industrial feedstock. Biotechnol Biofuels 7:133
Kirby J, Romanini DW, Paradise EM, Keasling JD (2008) Engineering triterpene production in Saccharomyces cerevisiae–β-amyrin synthase from Artemisia annua. FEBS J 275:1852–1859
Kuranda K, Grabinska K, Berges T, Karst F, Leberre V, Sokol S, François J, Palamarczyk G (2009) The YTA7 gene is involved in the regulation of the isoprenoid pathway in the yeast Saccharomyces cerevisiae. FEMS Yeast Res 9:381–390
Kwak S, Kim SR, Xu H, Zhang GC, Lane S, Kim H, Jin YS (2017) Enhanced isoprenoid production from xylose by engineered Saccharomyces cerevisiae. Biotechnol Bioeng 114:2581–2591
Liu J, Zhang W, Du G, Chen J, Zhou J (2013) Overproduction of geraniol by enhanced precursor supply in Saccharomyces cerevisiae. J Biotechnol 168:446–451
Loertscher J, Larson LL, Matson CK, Parrish ML, Felthauser A, Sturm A, Tachibana C, Bard M, Wright R (2006) Endoplasmic reticulum-associated degradation is required for cold adaptation and regulation of sterol biosynthesis in the yeast Saccharomyces cerevisiae. Eukaryot Cell 5:712–722
Mantzouridou F, Naziri E, Tsimidou MZ (2009) Squalene versus ergosterol formation using Saccharomyces cerevisiae: combined effect of oxygen supply, inoculum size, and fermentation time on yield and selectivity of the bioprocess. J Agric Food Chem 57:6189–6198
Mantzouridou F, Tsimidou MZ (2010) Observations on squalene accumulation in Saccharomyces cerevisiae due to the manipulation of HMG2 and ERG6. FEMS Yeast Res 10:699–707
Murakoshi M, Nishino H, Tokuda H, Iwashima A, Okuzumi J, Kitano H, Iwasaki R (1992) Inhibition by squalene of the tumor-promoting activity of 12-O-tetradecanoylphorbol-13-acetate in mouse-skin carcinogenesis. Int J Cancer 52:950–952
Naziri E, Mantzouridou F, Tsimidou MZ (2011) Enhanced squalene production by wild-type Saccharomyces cerevisiae strains using safe chemical means. J Agric Food Chem 59:9980–9989
Newmark HL (1997) Squalene, olive oil, and cancer risk: a review and hypothesis. Cancer Epidemiol Biomarkers Prev 6:1101–1103
Ohto C, Muramatsu M, Obata S, Sakuradani E, Shimizu S (2009) Overexpression of the gene encoding HMG-CoA reductase in Saccharomyces cerevisiae for production of prenyl alcohols. Appl Microbiol Biotechnol 82:837–845
Paradise EM, Kirby J, Chan R, Keasling JD (2008) Redirection of flux through the FPP branch-point in Saccharomyces cerevisiae by down-regulating squalene synthase. Biotechnol Bioeng 100:371–378
Polakowski T, Stahl U, Lang C (1998) Overexpression of a cytosolic hydroxymethylglutaryl-CoA reductase leads to squalene accumulation in yeast. Appl Microbiol Biotechnol 49:66–71
Rao CV, Newmark HL, Reddy BS (1998) Chemopreventive effect of squalene on colon cancer. Carcinogenesis 19:287–290
Rasool A, Ahmed MS, Li C (2016) Overproduction of squalene synergistically downregulates ethanol production in Saccharomyces cerevisiae. Chem Eng Sci 152:370–380
Rodriguez S, Kirby J, Denby CM, Keasling JD (2014) Production and quantification of sesquiterpenes in Saccharomyces cerevisiae, including extraction, detection and quantification of terpene products and key related metabolites. Nat Protoc 9:1980–1996
Sere YY, Regnacq M, Colas J, Berges T (2010) A Saccharomyces cerevisiae strain unable to store neutral lipids is tolerant to oxidative stress induced by α-synuclein. Free Radic Biol Med 49:1755–1764
Smith TJ (2000) Squalene: potential chemopreventive agent. Expert Opin Investig Drugs 9:1841–1848
Smith TJ, Yang G, Seril DN, Liao J, Kim S (1998) Inhibition of 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone-induced lung tumorigenesis by dietary olive oil and squalene. Carcinogenesis 19:703–706
Sohn J-H, Lee S-K, Choi E-S, Rhee S-K (1991) Gene expression and secretion of the anticoagulant hirudin in Saccharomyces cerevisiae. J Microbiol Biotechnol 1:266–273
Spanova M, Daum G (2011) Squalene–biochemistry, molecular biology, process biotechnology, and applications. Eur J Lipid Sci Technol 113:1299–1320
Storelli M, Ceci E, Storelli A, Marcotrigiano G (2003) Polychlorinated biphenyl, heavy metal and methylmercury residues in hammerhead sharks: contaminant status and assessment. Mar Pollut Bull 46:1035–1039
Tokuhiro K, Muramatsu M, Ohto C, Kawaguchi T, Obata S, Muramoto N, Hirai M, Takahashi H, Kondo A, Sakuradani E (2009) Overproduction of geranylgeraniol by metabolically engineered Saccharomyces cerevisiae. Appl Environ Microbiol 75:5536–5543
Tronchoni J, Rozès N, Querol A, Guillamón JM (2012) Lipid composition of wine strains of Saccharomyces kudriavzevii and Saccharomyces cerevisiae grown at low temperature. Int J Food Microbiol 155:191–198
Turoczy N, Laurenson L, Allinson G, Nishikawa M, Lambert D, Smith C, Cottier J, Irvine S, Stagnitti F (2000) Observations on metal concentrations in three species of shark (Deania calcea, Centroscymnus crepidater, and Centroscymnus owstoni) from southeastern Australian waters. J Agric Food Chem 48:4357–4364
Valachovic M, Garaiova M, Holic R, Hapala I (2016) Squalene is lipotoxic to yeast cells defective in lipid droplet biogenesis. Biochem Biophys Res Commun 469:1123–1128
Valachovič M, Hapala I (2017) Biosynthetic approaches to squalene production: the case of yeast. Methods Mol Biol 1494:95–106
Veen M, Stahl U, Lang C (2003) Combined overexpression of genes of the ergosterol biosynthetic pathway leads to accumulation of sterols in Saccharomyces cerevisiae. FEMS Yeast Res 4:87–95
Xie W, Lv X, Ye L, Zhou P, Yu H (2015) Construction of lycopene-overproducing Saccharomyces cerevisiae by combining directed evolution and metabolic engineering. Metab Eng 30:69–78
Zhuang X, Chappell J (2015) Building terpene production platforms in yeast. Biotechnol Bioeng 112:1854–1864
Acknowledgements
This research was supported by a Grant from the KRIBB Research Initiative Program and by a National Research Foundation of Korea (NRF) Grant from the Korea government (MSIP) (Grant no. NRF-2016R1A2B4009432). This work was also supported by the Korea Institute of Planning and Evaluation for Technology in Food, Agriculture, Forestry, and Fisheries (IPET) through the Animal Disease Management Technology Development Program funded by the Ministry of Agriculture, Food, and Rural Affairs (MAFRA; 316043-3).
Author information
Authors and Affiliations
Corresponding author
Ethics declarations
Conflict of interest
There are no conflicts of interest to declare.
Rights and permissions
About this article
Cite this article
Han, J.Y., Seo, S.H., Song, J.M. et al. High-level recombinant production of squalene using selected Saccharomyces cerevisiae strains. J Ind Microbiol Biotechnol 45, 239–251 (2018). https://doi.org/10.1007/s10295-018-2018-4
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s10295-018-2018-4