Abstract
A novel enamovirus was identified in common bean plants with disease symptoms. Its genome of 5,781 nucleotides (nt) contains five open reading frames. This virus and other members of the genus Enamovirus share 50.4-68.4% nucleotide sequence identity in the complete genome and 19.9-51.9% amino acid sequence identity in the P0 protein, 24.9-52.5% in P1, 33.4-62.9% in P1-P2, 30.6-81.1% in P3, and 32.3-74.2% in P3-P5. Phylogenetic analysis showed that the virus is most closely related to alfalfa enamovirus 1 and pea enation mosaic virus 1 in the genus Enamovirus of the family Solemoviridae. These results suggest that this virus, tentatively named “bean enamovirus 1”, should be classified as a member of a new species in the genus Enamovirus.
Similar content being viewed by others
References
Zhang J (2014) Study on the development and transmission history of Kidney bean. Agric Archaeol 4:218–229
Mwaipopo B, Nchimbi-Msolla S, Njau P, Tairo F, William M, Binagwa P, Kweka E, Kilango M, Mbanzibwa D (2017) Viruses infecting common bean (Phaseolus vulgaris L.) in Tanzania: a review on molecular characterization, detection and disease management options. Afr J Agric Res 12(8):1486–1500
Kamaal N, Akram M, Agnihotri AK (2015) Molecular evidence for the association of tomato leaf curl Gujarat virus with a leaf curl disease of Phaseolus vulgaris L. J Phytopathol 163(1):58–62
Liu Y, Li F, Li YY, Zhang SB, Gao XW, Xie Y, Yan F, Zhang AS, Dai LY, Cheng ZB, Ding M, Niu YB, Wang SJ, Che HY, Jiang T, Shi XB, He ZF, Wu YF, Zhang DY, Qing L, Yan WR, Yang XH, Tang YF, Zheng HY, Tang QJ, Zhang SB, Zhang DF, Cai L, Tao XR (2019) Identification, distribution and occurrence of viruses in the main vegetables of China. Scientia Agricultura Sinica 52(2):239–261
Sõmera M, Fargette D, Hébrard E, Sarmiento C (2021) Solemoviridae, ICTV https://talk.ictvonline.org/ictv-reports/ictv_online_report/positive-sense-rna-viruses/w/solemoviridae
Lan PX, He P, Zhang YK, Zhang S, Zhang ZB, Chen XJ, Tan ST, Luo HM, Cao MJ, Li F (2019) Molecular characterization of a novel potyvirus infecting noni. Arch Virol 164(12):3099–3102
Fusaro AF, Correa RL, Nakasugi K, Jackson C, Kawchuk L, Vaslin MFS, Waterhouse PM (2012) The Enamovirus P0 protein is a silencing suppressor which inhibits local and systemic RNA silencing through AGO1 degradation. Virol 426:178–187
Silva JME, Rwahnih MA, Blawid R, Nagata T, Fajardo TVM (2017) Discovery and molecular characterization of a novel enamovirus, grapevine enamovirus-1. Virus Genes 53(4):667–671
Demler SA, de Zoeten GA (1991) The nucleotide sequence and luteovirus-like nature of RNA 1 of an aphid non-transmissible strain of pea enation mosaic virus. J Gen Virol 72:1819–1834
Debat HJ, Bejerman N (2019) Novel bird’s-foot trefoil RNA viruses provide insights into a clade of legume-associated enamoviruses and rhabdoviruses. Arch Virol 164(5):1419–1426
Bejerman N, Giolitti F, Trucco V, Breuil S, Dietzgen RG, Lenardon S (2016) Complete genome sequence of a new enamovirus from Argentina infecting alfalfa plants showing dwarfism symptoms. Arch Virol 161(7):2029–2032
Palanga E, Martin DP, Galzi S, Zabre J, Bouda Z, Neya JB, Sawadogo M, Traore O, Peterschmitt M, Roumagnac P, Filloux D (2017) Complete genome sequences of cowpea polerovirus 1 and cowpea polerovirus 2 infecting cowpea plants in Burkina Faso. Arch Virol 162(7):1–4
Funding
This study was funded by the Yunnan Academician Expert Workstation (202005AF150040) and Program for Innovative Research Team (in Science and Technology) in University of Yunnan Province (Yunjiaoke 2014-22).
Author information
Authors and Affiliations
Corresponding authors
Ethics declarations
Conflict of interest
As the corresponding authors, Ruhui Li and Fan Li declare no conflict of interest involving the authors of this paper.
Ethical approval
This article does not contain any studies with human participants or animals performed by any of the authors.
Additional information
Handling Editor: Ralf Georg Dietzgen.
Publisher's Note
Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Supplementary Information
Below is the link to the electronic supplementary material.
Rights and permissions
About this article
Cite this article
Lu, Rb., Lan, Px., Kang, Rj. et al. Genomic characterization of a new enamovirus infecting common bean. Arch Virol 167, 999–1002 (2022). https://doi.org/10.1007/s00705-022-05387-w
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00705-022-05387-w