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Characterization of a new cucurbit-infecting ipomovirus from Sudan

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Abstract

Two members of the genus Ipomovirus (family Potyviridae) are known to infect cucurbits: cucumber vein yellowing virus (CVYV), which is emerging throughout the Mediterranean Basin, and squash vein yellowing virus (SqVYV), which has been described in America and the Caribbean Basin, and more recently in Israel. In this work, an ipomovirus different from CVYV and SqVYV, tentatively named coccinia mottle virus (CocMoV), was detected in a sample of the cucurbit Coccinia grandis collected in central Sudan in 2012. Sequence identity in nt was 68 % with CVYV, 59-60 % with SqVYV, cassava brown streak virus and Ugandan cassava brown streak virus, and less than 50 % with other members of the family Potyviridae. Preliminary biological and epidemiological studies indicate that CocMoV has a narrow natural host range and a low prevalence.

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References

  1. Adams MJ, Antoniw JF, Fauquet C (2005) Molecular criteria for genus and species discrimination within the family Potyviridae. Arch Virol 150:459–479

    Article  CAS  PubMed  Google Scholar 

  2. Adkins S, Webb SE, Achor D, Roberts PD, Baker CA (2007) Identification and characterization of a novel whitefly-transmitted member of the family Potyviridae isolated from cucurbits in Florida. Phytopathology 97:145–154

    Article  CAS  PubMed  Google Scholar 

  3. Dombrovsky A, Reingold V, Antignus Y (2014) Ipomovirus – an atypical genus in the family Potyviridae transmitted by whiteflies. Pest Manag Sci 70:1553–1567

    Article  CAS  PubMed  Google Scholar 

  4. Gibbs A, Mackenzie A (1997) A primer pair for amplifying part of the genome of all potyvirids by RT-PCR. J Virol Methods 63:9–16

    Article  CAS  PubMed  Google Scholar 

  5. Lecoq H, Desbiez C (2012) Viruses of cucurbit crops in the Mediterranean region: an ever-changing picture. Adv Virus Res 84:67–126

    Article  PubMed  Google Scholar 

  6. Reingold V, Lachman O, Sela N, Luria N, Dombrovsky A (2016) Watermelon fruit rot disease in Israel is caused by a distinct Squash vein yellowing virus (SqVYV) strain. Plant Dis 100:1173–1183

    Article  Google Scholar 

  7. Simon-Buela L, Guo HS, Garcia JA (1997) Cap-independent leaky scanning as the mechanism of translation initiation of a plant viral genomic RNA. J Gen Virol 78:2691–2699

    Article  CAS  PubMed  Google Scholar 

  8. Velasco L, Salem N, Willemsen A, Lapidot M, Mansour AN, Rubio L, Galipienso L (2016) Genetic variation and evolutionary forces shaping Cucumber vein yellowing virus populations: risk of emergence of virulent isolates in Europe. Plant Pathol 65:847–856

    Article  CAS  Google Scholar 

  9. Webster CG, Adkins S (2012) Low genetic diversity of Squash vein yellowing virus in wild and cultivated cucurbits in the US suggests a recent introduction. Virus Res 163:520–527

    Article  CAS  PubMed  Google Scholar 

  10. Winter S, Koerbler M, Stein B, Pietruszka A, Paape M, Butgereitt A (2010) Analysis of cassava brown streak viruses reveals the presence of distinct virus species causing cassava brown streak disease in East Africa. J Gen Virol 91:1365–1372

    Article  CAS  PubMed  Google Scholar 

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Correspondence to Cécile Desbiez.

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This research did not involve any human participants and/or animals. The authors declare that they have no conflict of interest.

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Desbiez, C., Verdin, E., Tepfer, M. et al. Characterization of a new cucurbit-infecting ipomovirus from Sudan. Arch Virol 161, 2913–2915 (2016). https://doi.org/10.1007/s00705-016-2981-x

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  • DOI: https://doi.org/10.1007/s00705-016-2981-x

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