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Detection of specific single-stranded DNA molecules through SiNW surface modulation

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Abstract

This paper demonstrate a silicon nanowire biosensor for the detection of specific ssDNA biomarker detection. The biosensor was fabricated using conventional photolithography coupled with an inductively coupled plasma dry etching process. The detection was performed with a semiconductor parameter analyzer which measured the changes in current and conductance of the nanowire electrodes upon target DNA hybridization. The sensor surface was silanized and directly aminated with (3-aminopropyl)triethoxysilane to create a molecular binding chemistry for bio-functionalization. The resulting Si–O–Si-components were functionalized with receptor ssDNA, which interacted with the targeted ssDNA to create a field across the silicon nanowire and increase the current. Hybridization detection discrimination among various concentration, the device response to the targets shows selectivity for the ssDNA in a linear range from ssDNA concentrations of 100 pM to 150 nM. Linearity of the device to molecular concentration, was confirm linear fit curve for the (0.1–0.5) nM concentration and (0–40) nM concentration.

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References

  • Adam Tijjani, Hashim U (2014) Highly sensitive silicon nanowire biosensor with novel liquid gate control for detection of specific single-stranded DNA molecules. Biosens Bioelectron 7184:1–6

    Google Scholar 

  • Aiping L, Yongxia Z, Weifeng C, Xiaohong W, Fusheng C (2013) Gold nanoparticle-based colorimetric detection of staphylococcal enterotoxin B using ssDNA aptamers. Eur Food Res Technol 237:323–329

    Article  Google Scholar 

  • Amit S, Somayyeh P, Stephane E (2013) Recent advances in bacteriophage based biosensors for food-borne pathogen detection. Sensors (Basel). 13(2):1763–1786

    Article  Google Scholar 

  • Archana B, Abhishek B, Abhinav M, Sohani M, Manjula S, Arvind KS (2014) Nanotechnology in dentistry: present and future. J Int Oral Health 6(1):121–126

    Google Scholar 

  • Bhupinder SS (2014) Nanotechnology in agri-food production: an overview. Nanotechnol Sci Appl 7:31–53

    Google Scholar 

  • Carmona-Ribeiro AM, de Melo Carrasco LD (2013) Cationic antimicrobial polymers and their assemblies. Int Mol Sci 14:9906–9946

    Article  Google Scholar 

  • Chang HK, Ishikawa FN, Zhang R, Datar R, Cote RJ, Thompson ME et al (2011) Rapid, label-free, electrical whole blood bioassay based on nanobiosensor systems. ACS Nano 5:9883–9891

    Article  Google Scholar 

  • Dhahi TS, Ali ME, Hashim U, Azah N, Ali IM, Ashoor MJ, Al-Roumy A, Hadi HA (2013) DNA hybridization detection using 5-nm polysilicon nanogap structure. Curr Nanosci 9(2):283–287

    Article  Google Scholar 

  • Eric KS, Anna LF, David JB (2014) The present and future role of microfluidics in biomedical research. Nature 507:181–189

    Article  Google Scholar 

  • Hasan A, Nurunnabi M, Morshed M, Paul A, Polini A, Kuila T, Al Hariri M, Lee YK, Jaffa AA (2014) Recent advances in application of biosensors in tissue engineering. BioMed Res Int 2014:1–18

    Google Scholar 

  • Hu MS, Maan ZN, Wu JC, Rennert RC, Hong WX, Lai TS, Cheung AT, Walmsley GG, Chung MT, McArdle A, Longaker MT, Lorenz HP (2014) Tissue engineering and regenerative repair in wound healing. Ann Biomed Eng 42:1494–1507

    Article  Google Scholar 

  • Juan FBC, Alexandre GB, Peter W, Ned D (2013) Detection of hydrogen peroxide using an optical fiber-based sensing probe. Sensors Actuators B 185(2013):166–173

    Google Scholar 

  • Jung Yang Il, Kim Hyun Gil, Park Jeong Yong, Koo Yang Hyun (2014) Oxidation behavior of silicon carbide at 1200 °C in both air and water–vapor-rich environments. Corros Sci 88:416–422

    Article  Google Scholar 

  • Lei Z, Dan L, Weijun S, Yanhua L, Yanan C, Rong X (2013) Detection of cancer biomarkers with nanotechnology. Am J Biochem Biotechnol 9(1):71–89

    Article  Google Scholar 

  • Linsheng Liu (2014) An improved gate charge model of HEMTs by direct formulating the branch charges. Chin J Electron 23(4):674–677

    Google Scholar 

  • Matthew GK, Robert LM, Louise C, Ged B, Fiona HB, Caroline D (2014) Molecular analysis of circulating tumour cells—biology and biomarkers. Nat Rev Clin Oncol 11:129–144

    Google Scholar 

  • Mohan KHGS, Indira KH (2014) Point of care technologies for HIV. AIDS Res Treat 2014:2–20

    Google Scholar 

  • Petersen DK, Naylor TM, Ver Halen JP (2014) Current and future applications of nanotechnology in plastic and reconstructive surgery. Plast Aesthet Res 1:43–50

    Article  Google Scholar 

  • Ryan MW, Cassandra LC, Srikanth G, Lisa AH, Letha JS (2014) In vitro selection of a single-stranded DNA molecular recognition element against atrazine. Int J Mol Sci 15:14332–14347

    Article  Google Scholar 

  • Scott CL, Yuanyuan L, Hao Z, Jason NB, Neal CS (2013) Monitoring the environmental impact of TiO2 nanoparticles using a plant-based sensor network. IEEE Trans Nanotechnol 12(2):182–189

    Article  Google Scholar 

  • Siti FAR, Nor AY, Uda H, Nuzaihan MMN (2013) Design and fabrication of silicon nanowire based sensor. Int J Electrochem Sci 8:10946–10960

    Google Scholar 

  • Torring T, Gothelf KV (2013) DNA nanotechnology: a curiosity or a promising technology. F1000 Prime Rep 5(14):1–4

    Google Scholar 

  • Wamakshi B, Alka V (2013) Nanotechnology method comparison for early detection of cancer. Int J Intell Syst Appl 03:58–65

    Google Scholar 

  • Xie P, Xiong Q, Fang Y, Qing Q, Lieber CM (2012) Local electrical potential detection of DNA by nanowire–nanopore sensors. Nat Nanotechnol 7:119–125

    Article  Google Scholar 

  • Zhang Q, Ding J, Kou L, Wei Q (2013a) Potentiometric flow biosensor based on ammonia-oxidizing bacteria for the detection of toxicity in water. Sensors 13:6936–6945

    Article  Google Scholar 

  • Zhang XX, Han XF, Wu FG et al (2013b) Nano-bio interfaces probed by advanced optical spectroscopy: from model system studies to optical biosensors. Chin Sci Bull 58:2537–2556

    Article  Google Scholar 

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Acknowledgments

The authors wish to thank the Universiti Malaysia Perlis UniMAP and Ministry of Higher Education Malaysia for providing a FRGS (90003-00364) Grant to conduct this research in the INEE Lab. Much appreciation also goes to all the team members in the Institute of Nanoelectronic Engineering, especially the Nanostructure Lab-On-Chip Research Group.

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Correspondence to Tijjani Adam.

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Adam, T., Hashim, U. Detection of specific single-stranded DNA molecules through SiNW surface modulation. Microsyst Technol 22, 269–273 (2016). https://doi.org/10.1007/s00542-014-2386-2

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  • DOI: https://doi.org/10.1007/s00542-014-2386-2

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