Abstract
Two photorespiratory mutants from Lotus japonicus, namely Ljgln2-1 and Ljgln2-2, deficient in plastidic glutamine synthetase (GLN2), were analysed at the molecular level. Both mutants showed normal levels of Gln2 mRNA, indicating that they were affected post-transcriptionally. Complete sequencing of full-length Gln2 cDNAs revealed the presence of a single point mutation on each mutant, leading to G85R and L278H amino acid replacements, respectively. Different types of experimental approaches, including heterologous expression and complementation tests in Escherichia coli, showed that both GLN2 mutant proteins completely lacked of biosynthetic and transferase enzyme activities. Moreover, it was also shown that while GLN2-1 mutant protein was assembled into a less stable inactive octamer, GLN2-2 mutant protein was unable to acquire a proper quaternary structure and was rapidly degraded. Therefore, the mutations analysed are the first of their type affecting the stability and/or the quaternary structure of the GLN2 enzyme. The kinetic parameters of purified recombinant GLN2 were determined. The enzyme showed positive cooperativity towards ammonium and Mg2+. Thiol compounds stimulated by twofold the biosynthetic activity but not the transferase activity of recombinant GLN2 and were able to alter the kinetics towards glutamate of the enzyme. Moreover, the biosynthetic activity of recombinant GLN2 was stimulated by more than tenfold by the presence of free Mg2+.
Similar content being viewed by others
Abbreviations
- GS:
-
Glutamine synthetase
- GOGAT:
-
Glutamate synthase
- GLN1:
-
Cytosolic glutamine synthetase (also called GS1)
- GLN2:
-
Plastidic glutamine synthetase (also called GS2)
- CTAB:
-
Hexadecyltrimethylammonium bromide
- DTE:
-
Dithioerythritol
- DTT:
-
Dithiothreitol
- EMS:
-
Ethyl methanesulphonate
- EST:
-
Expressed sequenced tag
- γ-GHA:
-
γ-Glutamylhydroxamate
- GSH:
-
Reduced glutathione
- h:
-
Hill number
- IPTG:
-
Isopropyl-beta-d-thiogalactopyranoside
References
Bennett MJ, Cullimore JV (1990) Expression of three plant glutamine synthetase cDNAs in E. coli. Formation of catalytically active isoenzymes, and complementation of a glnA mutant. Eur J Biochem 193:319–324
Betti M, Márquez AJ, Yanes C, Maestre A (2002) ATP binding to purified homopolymeric plant glutamine synthetase studied by isothermal titration calorimetry. Thermochim Acta 394:63–71
Choi YA, Kim SG, Kwon YM (1999) The plastidic glutamine synthetase activity is directly modulated by means of redox change at two unique cysteine residues. Plant Sci 149:175–182
Clemente MT, Márquez AJ (1999a) Functional importance of Asp56 from the α-polypeptide of Phaseolus vulgaris glutamine synthetase. An essential residue for transferase but not for biosynthetic enzyme activity. Eur J Biochem 264:453–460
Clemente MT, Márquez AJ (1999b) Site-directed mutagenesis of Glu-297 from the α-polypeptide of Phaseolus vulgaris glutamine synthetase alters kinetic and structural properties and confers resistance to l-methionine sulfoximine. Plant Mol Biol 40:835–845
Clemente MT, Márquez AJ (2000) Site-directed mutagenesis of Cys-92 from the α-polypeptide of Phaseolus vulgaris glutamine synthetase reveals that this highly conserved residue is not essential for enzyme activity but it is involved in thermal stability. Plant Sci 154:189–197
De la Torre F, García-Gutierrez A, Crespillo R, Canton FR, Avila C, Cánovas FM (2002) Functional expression of two pine glutamine synthetase genes in bacteria reveals that they encode cytosolic holoenzymes with different molecular and catalytic properties. Plant Cell Physiol 43:802–809
Denton MD, Ginsburg A (1969) Conformational changes in glutamine synthetase from Escherichia coli. I. The binding of Mn2+ in relation to some aspects of the enzyme structure and activity. Biochemistry 8:1714–1725
Denton MD, Ginsburg A (1970) Some characteristics of the binding of substrates to glutamine synthetase from Escherichia coli. Biochemistry 9:617–632
Eisenberg D, Gill HS, Pfluegl GMU, Rotstein SH (2000) Structure-function relationships of glutamine synthetases. Biochim Biophys Acta 1477:122–145
Emanuelsson O, Nielsen H, von Heijne G (1999) ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites. Protein Sci 8:978–984
Florencio FJ, Vega JM (1983) Separation, purification and characterization of two isoforms of glutamine synthetase from Chlamydomonas reinhardtii. Z Naturforsh 38:531–538
Forde BG, Cullimore JV (1989) The molecular biology of glutamine synthetase in higher plants. Oxford Surv Plant Mol Cell Biol 6:247–296
Freeman J, Márquez AJ, Wallsgrove RM, Saarelainen R, Forde BG (1990) Molecular analysis of barley mutants deficient in chloroplast glutamine synthetase. Plant Mol Biol 14:297–311
Freidfelder D (1987) Chemical mutagens. In: Daven CI (ed) Molecular biology, 2nd edn. Jones and Bartlett Publishers, Boston, pp 300–302
Grotjohann N, Kowallik W, Huang Y, Shulte in den Baumen A (2000) Investigation into enzymes of nitrogen metabolism of the ectomycorrhizal basidiomycete, Suillus bovinus. Z Naturforsh 55c:203–212
Hirel B, Gadal P (1980) Glutamine synthetase in rice: a comparative study of the enzymes from root and leaves. Plant Physiol 66:619–623
Hirel B, Lea PJ (2002) The biochemistry, molecular biology, and genetic manipulation of primary ammonia assimilation. In: Foyer CH, Noctor G (eds) Photosynthetic nitrogen assimilation and associated carbon and respiratory metabolism. Kluwer, Dordrecht, pp 71–92
Höpfner M, Reifferscheid G, Wild A (1988) Molecular composition of glutamine synthetase of Sinapsis alba L. Z Naturforsch 43c:194–198
Iakoucheva LM, Kimzey AL, Masselon CD, Smith RD, Dunker AK, Ackerman EJ (2001) Aberrant mobility phenomena of the DNA repair protein XPA. Protein Sci 10: 1353–1362
Ishiyama K, Inoue E, Watanabe-Takahashi A, Obara M, Yamaya T, Takahashi H (2004) Kinetic properties and ammonium-dependent regulation of cytosolic isoenzymes of glutamine synthetase in Arabidopsis. J Biol Chem 279:16598–16605
Kretovich WL, Evstigneeva ZG, Pushkin AV, Dzhokharidze TZ (1981) Two forms of glutamine synthetase in leaves of Cucurbita pepo. Phytochemistry 20:625–629
Kunz BA, Henson ES, Karthikeyan R, Kuschak T, McQueen SA, Scott CA, Xiao W (1998) Defects in base excision repair combined with elevated intracellular dCTP levels dramatically reduce mutation induction in yeast by ethil methanesulfonate and N-methyl-N′-nitro-N-nitrosoguanidine. Environ Mol Mutat 32:173–178
Lam HM, Coschigano KT, Oliveira IC, Melo-Oliveira R, Coruzzi GM (1996) The molecular genetics of nitrogen assimilation into amino acids in higher plants. Annu Rev Plant Physiol Plant Mol Biol 47:569–593
Lea PJ (1991) The inhibition of ammonia assimilation: a mechanism of herbicide action. In: Baker NR, Percival MP (eds) Herbicides. Elsevier, Amsterdam, pp 267–298
Listrom CD, Morizono H, Rajagopal BS, McCann M, Tuchman M, Allewell N (1997) Expression, purification, and characterization of recombinant human glutamine synthetase. Biochem J 328:159–163
Mäck G (1998) Glutamine synthetase isoenzymes, oligomers and subunits from hairy roots of Beta vulgaris L. var. lutea. Planta 205:113–120
Mäck G, Tischner R (1994) Activity of the tetramer and octamer of glutamine synthetase isoforms during primary leaf ontogeny of sugar beet (Beta vulgaris L.). Planta 194:353–359
Mann AF, Fentem PA, Stewart GR (1979) Identification of two forms of glutamine synthetase in barley (Hordeum vulgare). FEBS Lett 110:265–267
Mandersheid R, Wild A (1986) Characterization of glutamine synthetase of roots, etiolated cotyledons and green leaves from Sinapsis alba (L.). Z Naturforsh 41c:712–716
Márquez AJ, Betti M, García-Calderón M, Pal’ove-Balang P, Diaz P, Monza J (2005) Nitrate assimilation in Lotus japonicus. J Exp Bot 56:1729–1739
Melo PM, Lima LM, Santos IM, Carvalho HG, Cullimore JV (2003) Expression of the plastid-located glutamine synthetase of Medicago truncatula. Accumulation of the precursor in root nodules reveals an in vivo control at the level of protein import into plastids. Plant Physiol 132:390–399
Montanini B, Betti M, Márquez AJ, Balestrini R, Bonfante P, Ottonello S (2003) Distinctive properties and expression profiles of glutamine synthetase from a plant symbiotic fungus. Biochem J 373:357–368
Motohashi K, Kondoh A, Stumpp MT, Hisabori T (2001) Comprehensive survey of proteins targeted by chloroplast thioredoxin. Proc Natl Acad Sci USA 98:11224–11229
Muhitch MJ (1989) Purification and characterization of two forms of glutamine synthetase from the pedicel region of maize (Zea mays L.) kernels. Plant Physiol 91:868–875
O’Neal D, Joy KW (1974) Glutamine synthetase of pea leaves. Divalent cation effects, substrate specificity, and other properties. Plant Physiol 54:773–779
Orea A, Pajuelo P, Pajuelo E, Quidiello C, Romero JM, Márquez AJ (2002) Isolation of photorespiratory mutants from Lotus japonicus deficient in glutamine synthetase. Physiol Plant 115:352–361
O’Sullivan WJ, Smithers GW (1979) Stability constants for biologically important metal-ligand complexes. In: Purich DL (ed) Methods in enzymology, vol 63. Academic, New York, pp 294–336
Pajuelo E, Borrero JA, Márquez AJ (1993) Immunological approach to subunit composition of ferredoxin-nitrite reductase from Chlamydomonas reinhadtii. Plant Sci 95:9–21
Palatnik JF, Carrillo N, Valle EM (1999) The role of photosynthetic electron transport in the oxidative degradation of chloroplastic glutamine synthetase. Plant Physiol 121:471–478
Pastink A, Heemskerk E, Nivard MJ, van Vliet CJ, Vogel EW (1991) Mutational specificity of ethyl methanesulfonate in excision-repair-proficient and—deficient strains of Drosophila melanogaster. Mol Gen Genet 229:213–218
Sakakibara H, Shimizu H, Hase T, Yamazaki Y, Takao T, Shimonishi Y, Sugiyama T (1996) Molecular identification and characterization of cytosolic isoforms of glutamine synthetase in maize roots. J Biol Chem 271:29561–29568
Sambrook J, Russell DW (2001) In: Molecular cloning: a laboratory manual. 3rd edn. Cold Spring Harbor Laboratory Press, New York
Sarkar PK, Fischman DA, Goldwasser E, Moscona AA (1972) Isolation and characterization of glutamine synthetase from chichen neural retina. J Biol Chem 247:7743–7749
Shaham S, Reddien PW, Davies B, Horvitz HR (1999) Mutational analysis of the Caenorhabditis elegans cell-death gene ced-3. Genetics 153:1655–1671
Shankar RA, Anderson PM (1985) Purification and properties of glutamine synthetase from liver of Squalus acanthias. Arch Biochem Biophys 239:248–259
Siegel LM, Monty KJ (1966) Determination of molecular weights and frictional ratios of proteins in impure systems by use of gel filtration and density gradient centrifugation. Application to crude preparations of sulphite and hydroxylamine reductases. Biochim Biophys Acta 112:346–362
Stougaard J, Szczyglowski K, de Bruijn FJ, Parniske M (1999) Genetic nomenclature guidelines for the model legume Lotus japonicus. Trends Plant Sci 8:300–301
Temple SJ, Kunjibettu S, Roche D, Sengutpa-Gopalan C (1996) Total glutamine synthetase activity during soybean nodule development is controlled at the level of transcription and holoprotein turnover. Plant Physiol 112:1723–1733
Von Heijne G, Steppuhn J, Herrmann RG (1989) Domain structure of mitochondrial and chloroplast targeting peptides. Eur J Biochem 180:535–545
Waegemann K, Soll J (1996) Phosphorylation of the transit sequence of chloroplast precursor proteins. J Biol Chem 271:6545–6554
Wallsgrove RM, Turner JP, Hall NP, Kendall AC, Bright SWJ (1987) Barley mutants lacking chloroplast glutamine synthetase—biochemical and genetic analysis. Plant Physiol 83:155–158
Wedler FC, Denman RB (1984) Glutamine synthetse: the major Mn(II) enzyme in mammalian brain. Curr Top Cell Regul 24:153–169
Woodall J, Boxall JG, Forde BG, Pearson J (1996) Changing perspectives in plant nitrogen metabolism: the central role of glutamine synthetase. Sci Prog 79:1–26
Woodall J, Forde BG (1996) Glutamine synthetase polypeptides in the roots of 55 legume species in relation to their climatic origin and the partitioning of nitrate assimilation. Plant Cell Environ 19:848–858
Acknowledgements
The authors wish to thank funding from research projects BMC2001-3162/BFU2004-02753/BFU2005-03120 from MCYT/MEC-FEDER (Spain), HPRN-CT2000-00086, MRTN-CT-2003-505227 and INCO-Dev 517617 from the European Union, as well as support given by Junta de Andalucía to group CVI-163. The authors also wish to thank Prof. Peter J. Lea (Lancaster University) and Prof. Brian G. Forde (Lancaster University) for a critical reading of this manuscript. Analytical ultracentrifugation facilities were provided by Drs. G. Rivas and C. Alfonso from the service of analytical ultracentrifugation (CIB, Madrid, Spain). Technical assistance of MJ Cubas (Universidad de Sevilla) is also gratefully acknowledged.
Author information
Authors and Affiliations
Corresponding author
Electronic supplementary material
Rights and permissions
About this article
Cite this article
Betti, M., Arcondéguy, T. & Márquez, A.J. Molecular analysis of two mutants from Lotus japonicus deficient in plastidic glutamine synthetase: functional properties of purified GLN2 enzymes. Planta 224, 1068–1079 (2006). https://doi.org/10.1007/s00425-006-0279-z
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s00425-006-0279-z