Abstract
Many groups of eukaryotes with an ancestrally outcrossing sexual system include species that have adopted uniparental reproduction (either parthenogenesis or self-fertility). Nematodes are one such group. Because of recent advances in molecular phylogenetics, the evolutionary patterns of nematode sexual mode are becoming clearer. In this chapter, we first present a molecular phylogeny of over 200 Clade 9 nematodes and map changes in sexual mode upon it. Clade 9 includes both parasites of the order Strongylida and free-living species that include Caenorhabditis elegans, the most studied nematode. Uniparental reproduction has evolved a minimum of 15 times in the clade, but none of these are within the clade of parasitic species. We discern two local phylogenetic patterns after the origin of uniparental reproduction. In Pattern 1, parthenogenic or selfing species are isolated taxa that apparently go extinct before speciation. In Pattern 2, uniparental reproduction is ancestral to a diversified clade and is relatively ancient. We next review the evolutionary developmental biology aspects of self-fertility in Caenorhabditis, the one taxon for which it has been investigated. Finally, we summarize recent work documenting surprising impacts of self-fertility on genome size and content.
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Acknowledgments
We thank Drs. Lynn Carta, David Fitch, Augustin Jimenez, Natsumi Kanzaki, and Karin Kiontke for helping in determining the reproductive mode of some species, Dr. Erich Schwartz for sharing unpublished genome assembly sizes, Dr. Arlin Stoltzfus for useful discussions, and Ralf Sommer for use of an image. Research described in this chapter was supported by NIH grant GM079414 and NSF grant IOS-1355119, both to ESH.
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Appendix: Sources for Sexual Modes in Fig. 4.2
Appendix: Sources for Sexual Modes in Fig. 4.2
Species | References | |
---|---|---|
Angiostrongylus | costaricensis | |
Angiostrongylus | dujardini | |
Angiostrongylus | vasorum | |
Angiostrongylus | malaysiensis | |
Angiostrongylus | cantonensis | |
Parafilaroides | decorus | Dailey (2009) |
Halocercus | invaginatus | Moser and Rhinehart (1993) |
Stenurus | minor | Faulkner et al. (1998) |
Torynurus | convolutus | Baylis and Daubney (1925) |
Filaroides | martis | Ko and Anderson (1972) |
Metastrongylus | elongates/salmi | Morita et al. (2007) |
Oslerus | rostratus | |
Oslerus | osleri | |
Dictyocaulus | eckerti | Divina et al. (2000) |
Dictyocaulus | capreolus | Gibbons and Hoglund (2002) |
Dictyocaulus | viviparus | Divina et al. (2000) |
Dictyocaulus | filaria | Urquhart et al. (1996) |
Protostrongylus | rufescens | Jabbar et al. (2013) |
Muellerius | capillaris | Kuchboev et al. (2015) |
Aelurostrongylus | abstrusus | Urquhart et al. (1996) |
Parelaphostrongylus | odocoilei | Kontrimavichus et al. (1985) |
Skrjabingylus | chitwoodorum | Kontrimavichus et al. (1985) |
Otostrongylus | circumlitus | Lehnert et al. (2010) |
Crenosoma | vulpis | Kontrimavichus et al. (1985) |
Crenosoma | striatum | Kontrimavichus et al. (1985) |
Crenosoma | mephitidis | Kontrimavichus et al. (1985) |
Troglostrongylus | wilsoni | Kontrimavichus et al. (1985) |
Viannaia | viannai | Monet-Mendoza et al. (2005) |
Viannaia | hamata | Gomes et al. (2003) |
Herpetostrongylus | pythonis | Durett-Desset (2009) |
Austrostrongylus | victoriensis | Beveridge and Durett-Desset (1986) |
Nicollina | cameroni | Durette-Desset and Cassone (1983) |
Travassostrongylus | callis | Cameron and Myers (1961) |
Travassostrongylus | orloffi | Cameron and Myers (1961) |
Heligmosomoides | polygyrus | Reynolds et al. (2012) |
Nippostrongylus | brasiliensis | Camberis et al. (2003) |
Vexillata | convoluta | Gardner et al. (1994) |
Deletrocephalus | dimidiatus | Taylor et al. (2000) |
Ancylostoma | duodenale | Schneider et al. (2011) |
Ancylostoma | caninum | Schneider et al. (2011) |
Hovorkonema | variegatum | Krone et al. (2007) |
Syngamus | trachea | Urquhart et al. (1996) |
Necator | americanus | Schneider et al. (2011) |
Cyclodontostomum | purvisi | Hasegawa and Syafruddin (1994) |
Chabertia | ovina | Umair et al. (2016) |
Zoniolaimus | mawsonae | Huby-Chilton et al. (2002) |
Hypodontus | macropi | Beveridge (1979) |
Labiostrongylus | bipapillosus | Chilton et al. (2003) |
Stephanurus | dentatus | Romanowski (1982) |
Strongylus | equinus | Urquhart et al. (1996) |
Petrovinema | poculatum | Silva et al. (1999) |
Kalicephalus | cristatus | Chilton et al. (2006) |
Trichostrongylus | colubriformis | Urquhart et al. (1996) |
Ostertagia | ostertagi | Urquhart et al. (1996) |
Ostertagia | leptospicularis | Suarez and Cabaret (1992) |
Nematodirus | battus | Urquhart et al. (1996) |
Nematodirella | cameli | Sharifiyazdi et al. (2015) |
Filarinema | flagrifer | Mawson (1964) |
Tetrabothriostrongylus | mackerrasae | Mawson (1960) |
Amidostomum | cygni | Kavetska et al. (2011) |
Haemonchus | contortus | Urquhart et al. (1996) |
Heterorhabditis | megidis | Ehlers et al. (1998) |
Heterorhabditis | bacteriophora | Ciche (2007) |
Heterorhabditis | hepialus | Stock et al. (1996) |
Heterorhabditis | sp. 1 | Strauch et al. (1994) |
Heterorhabditis | zealandica | Grewal et al. (2002) |
Rhabditis | colombiana | Stock et al. (2005) |
Oscheius | sp. 3 | Felix (2006) |
Oscheius | insectivora | Felix (2006) |
Oscheius | myriophila | Felix (2006) |
Heterorhabditoides | chongmingensis | Zhang et al. (2008) |
Heterorhabditidoides | sp. 1 | Felix (2006) |
Oscheius | dolichura | Felix (2006) |
Oscheius | sp. 1 | Felix (2006) |
Oscheius | dolichuroides | Felix (2006) |
Oscheius | guentheri | Felix (2006) |
Oscheius | tipulae | Sudhaus (1993) |
Pellioditis | mediterranea | Fitch (2016a) |
Pellioditis | marina | Andrássy (1983) |
Cephaloboides | nidrosiensis | Fitch (2016a) |
Cephaloboides | cf. armata | Sudhaus and Fitch (2001) |
Curviditis | sp. 1 | |
Rhabditella | sp. 1 | |
Rhabditella | axei | Fitch (2016a) |
Agfa | flexilis | Ribas and Casanova (2002) |
Phasmarhabditis | hermaphrodita | Stock and Hunt (2005) |
Phasmarhabditis | sp. 1 (neopapillosa) | Hooper et al. (1999) |
Angiostoma | dentifera | |
Angiostoma | limacis | |
Pellioditis | typica | Kiontke and Fitch (2005) |
Rhabditis | blumi | Kiontke and Fitch (2005) |
Rhabditis | rainai | Carta and Osbrink (2005) |
Cruznema | sp. 1 | L. Carta (personal communication) |
Cruznema | tripartitum | L. Carta (personal communication) |
Caenorhabditis | briggsae | Kiontke et al. (2011) |
Caenorhabditis | remanei | Kiontke et al. (2011) |
Caenorhabditis | japonica | Kiontke et al. (2011) |
Caenorhabditis | sp. 2 | Kiontke et al. (2011) |
Caenorhabditis | elegans | Kiontke et al. (2011) |
Caenorhabditis | sinica | Kiontke et al. (2011) |
Caenorhabditis | sp. 1 | Kiontke et al. (2011) |
Caenorhabditis | plicata | Kiontke et al. (2011) |
Caenorhabditis | drosophilae | Kiontke et al. (2011) |
Caenorhabditis | brenneri | Kiontke et al. (2011) |
Caenorhabditis | angaria | Kiontke et al. (2011) |
Caenorhabditis | sonorae | Kiontke et al. (2011) |
Diploscapter | coronatus | Lahl et al. (2006) |
Protorhabditis | sp. 3 | Kiontke and Fitch (2005) |
Protorhabditis | sp. 2 | Fitch (2016b) |
Prodontorhabditis | wirthi | Fitch (2016a) |
Protorhabditis | sp. 1 | Fitch (2016a) |
Choriorhabditis | cristata | Kiontke and Fitch (2005) |
Choriorhabditis | dudichi | Fitch (2016a) |
Mesorhabditis | sp. 2 | L. Carta (personal communication) |
Mesorhabditis | sp. 1 | L. Carta (personal communication) |
Mesorhabditis | sp. 2 | L. Carta (personal communication) |
Mesorhabditis | sp. 3 | L. Carta (personal communication) |
Mesorhabditis | sp. 4 | L. Carta (personal communication) |
Mesorhabditis | sp. 2G | L. Carta (personal communication) |
Mesorhabditis | sp. 3G | L. Carta (personal communication) |
Mesorhabditis | longespiculosa | Fitch (2016a) |
Mesorhabditis | anisomorpha | Sudhaus (1978) |
Mesorhabditis | miotki | Sudhaus (1978) |
Parasitorhabditis | sp. 1 | Tomalak et al. (1989) |
Parasitorhabditis | obtusa | Tomalak et al. (1989) |
Mesorhabditis | scanica | L. Carta (personal communication) |
Teratorhabditis | synpapillata | Fitch (2016a) |
Teratorhabditis | palmarum | Gerber and Giblin-Davis (1990) |
Teratorhabditis | stiannula | Fitch (2016a) |
Teratorhabditis | mariannae | Fitch (2016a) |
Pelodera | pseudoteres | Schulte (1989) |
Pelodera | teres | Schulte (1989) |
Pelodera | punctata | Fitch (2016a) |
Pelodera | strongyloides | Saari and Nikander (2006) |
Pelodera | cylindrica | Hesling (1966) |
Rhabditoides | regina | Fitch (2016a) |
Rhabditoides | inermis | Kiontke and Fitch (2005) |
Rhabditidoides | sp. 1 | Fitch (2016a) |
Diplogasteroides | magnus | Kiontke et al. (2001) |
Diplogasteroides | sp. 2 | M. Hermann (personal communication) |
Diplogastrellus | sp. 3 | Fitch (2016a) |
Pseudodiplogasteroides | compositus | Korner (1954) |
Diplogastrellus | sp. 1 | Fitch (2016a) |
Rhabditolaimus | leuckarti | V. Susoy (personal communication) |
Myctolaimus | sp. 1 | P. De Ley (personal communication) |
Myctolaimus | sp. 2 | P. De Ley (personal communication) |
Pristionchus | (all species) | Mayer et al. (2007) |
Oigolaimella | sp. 2 | N. Kanzaki (personal communication) |
Demaniella | sp. 1 | Pillai and Taylor (1968) |
Oigolaimella | sp. 1 | N. Kanzaki (personal communication) |
Fictor | sp. 1 | Powers (2016) |
Acrostichus | sp. 1 | Kanzaki et al. (2010) |
Acrostichus | sp. 5 | Kanzaki et al. (2010) |
Acrostichus | halicti | Kiontke and Fitch (2005) |
Diplogaster | rivalis | Abolafia (2006) |
Mononchoides | striatus | Calaway and Tarjan (1973) |
Neodiplogaster | sp. 1 | Kanzaki et al. (2008) |
Tylopharynx | foetida | Wu et al. (2001) |
Koerneria | sp. 1 | Mayer et al. (2007) |
Koerneria | lucani | Kanzaki et al. (2014) |
Diplenteron | colobocercus | Bongers et al. (1988) |
Koerneria | luziae | Kanzaki et al. (2011) |
Bunonema | reticulatum a | Holterman and Helder (unpublished observations), Fitch (2016a) |
Bunonema | richtersi a | Van Gansbeke et al. (2004), Nematology Lab at University of Nebraska (2016) |
Rhabditoides | inermiformis | Kiontke and Fitch (2005) |
Poikilolaimus | sp. 4 | N. Kanzaki (personal communication) |
Poikilolaimus | sp. 3 | N. Kanzaki (personal communication) |
Poikilolaimus | sp. 5 | N. Kanzaki (personal communication) |
Poikilolaimus | sp. 1 | N. Kanzaki (personal communication) |
Poikilolaimus | oxycercus | |
Seinura | tenuicaudata | Hechler (1963) |
Odontopharynx | longicaudata | Chitambar and Noffsinger (1989) |
Myolaimus | sp. 1 | Cobb (1920) |
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Haag, E.S., Helder, J., Mooijman, P.J.W., Yin, D., Hu, S. (2018). The Evolution of Uniparental Reproduction in Rhabditina Nematodes: Phylogenetic Patterns, Developmental Causes, and Surprising Consequences. In: Leonard, J. (eds) Transitions Between Sexual Systems. Springer, Cham. https://doi.org/10.1007/978-3-319-94139-4_4
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