Skip to main content

Methods for Measuring Type I Collagen Synthesis In Vitro

  • Protocol
Fibrosis Research

Part of the book series: Methods in Molecular Medicine ((MIMM,volume 117))

  • 3253 Accesses

Abstract

The excess accumulation of type I collagen within tissues leads to organ dysfunction and occurs as a result of an imbalance between synthesis and degradation. This chapter outlines several methods to assess the in vitro production of type I collagen that are employed in our laboratory. We describe Western immunoblotting of intact α1(I) collagen using antibodies directed to α1(I) collagen amino and carboxyl propeptides. The measurement of α1(I) collagen mRNA levels using real-time polymerase chain reaction is then outlined. Finally, methods to determine the transcriptional regulation of α1(I) collagen using a nuclear run-on assay are described.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 89.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 119.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Prockop, D. J., Kivirikko, K. I., Tuderman, L., and Guzman, N. A. (1979) The biosynthesis of collagen and its disorders (second of two parts). N. Engl. J. Med. 301(2), 77–85.

    Article  PubMed  CAS  Google Scholar 

  2. Prockop, D. J., Kivirikko, K. I., Tuderman, L., and Guzman, N. A. (1979) The biosynthesis of collagen and its disorders (first of two parts). N. Engl. J. Med. 301(1), 13–23.

    Article  PubMed  CAS  Google Scholar 

  3. Vuorio, E. and de Crombrugghe, B. (1990) The family of collagen genes. Annu. Rev. Biochem. 59, 837–872.

    Article  PubMed  CAS  Google Scholar 

  4. Raghow, R., Lurie, S., Seyer, J. M., and Kang, A. H. (1985) Profiles of steady state levels of messenger RNAs coding for type I procollagen, elastin, and fibronectin in hamster lungs undergoing bleomycin-induced interstitial pulmonary fibrosis. J. Clin. Invest. 76(5), 1733–1739.

    Article  PubMed  CAS  Google Scholar 

  5. Penttinen, R. P., Kobayashi, S., and Bornstein, P. (1988) Transforming growth factor beta increases mRNA for matrix proteins both in the presence and in the absence of changes in mRNA stability. Proc. Natl. Acad. Sci. USA 85(4), 1105–1108.

    Article  PubMed  CAS  Google Scholar 

  6. Stefanovic, B., Hellerbrand, C., Holcik, M., Briendl, M., Aliebhaber, S., and Brenner, D. A. (1997) Posttranscriptional regulation of collagen alpha1(I) mRNA in hepatic stellate cells. Mol. Cell Biol. 17(9), 5201–5209.

    PubMed  CAS  Google Scholar 

  7. Doege, K. J. and Fessler, J. H. (1986) Folding of carboxyl domain and assembly of procollagen I. J. Biol. Chem. 261(19), 8924–8935.

    PubMed  CAS  Google Scholar 

  8. Wilson, R., Lees, J. F., and Bulleid, N. J. (1998) Protein disulfide isomerase acts as a molecular chaperone during the assembly of procollagen. J. Biol. Chem. 273(16), 9637–9643.

    Article  PubMed  CAS  Google Scholar 

  9. Rocnik, E. F., van d, V., Cao, H., Hegele, R. A., and Pickering, J. G. (2002) Functional linkage between the endoplasmic reticulum protein Hsp47 and procollagen expression in human vascular smooth muscle cells. J. Biol. Chem. 277(41), 38,571–38,578.

    Article  PubMed  CAS  Google Scholar 

  10. Kivirikko, K. I., Myllyla, R., and Pihlajaniemi, T. (1989) Protein hydroxylation: prolyl 4-hydroxylase, an enzyme with four cosubstrates and a multifunctional subunit. FASEB J. 3(5), 1609–1617.

    PubMed  CAS  Google Scholar 

  11. Berg, R. A., Steinmann, B., Rennard, S. I., and Crystal, R. G. (1983) Ascorbate deficiency results in decreased collagen production: under-hydroxylation of proline leads to increased intracellular degradation. Arch Biochem. Biophys. 226(2), 681–686.

    Article  PubMed  CAS  Google Scholar 

  12. Rowe, L. B. and Schwarz, R. I. (1983) Role of procollagen mRNA levels in controlling the rate of procollagen synthesis. Mol. Cell Biol. 3(2), 241–249.

    PubMed  CAS  Google Scholar 

  13. Schwarz, R. I. (1985) Procollagen secretion meets the minimum requirements for the rate-controlling step in the ascorbate induction of procollagen synthesis. J. Biol. Chem. 260(5), 3045–3049.

    PubMed  CAS  Google Scholar 

  14. Fitzgerald, J., Lamande, S. R., and Bateman, J. F. (1999) Proteasomal degradation of unassembled mutant type I collagen pro-alpha1(I) chains. J. Biol. Chem. 274(39), 27,392–27,398.

    Article  PubMed  CAS  Google Scholar 

  15. Rishikof, D. C., Ricupero, D. A., Poliks, C. F., and Goldstein, R. H. (1999) Amino acid availability regulates type I procollagen accumulation in human lung fibroblasts. J. Cell Biochem. 75(1), 130–137.

    Article  PubMed  CAS  Google Scholar 

  16. Bienkowski, R. S. (1984) Collagen degradation in human lung fibroblasts: extent of degradation, role of lysosomal proteases, and evaluation of an alternate hypothesis. J. Cell Physiol. 121(1), 152–158.

    Article  PubMed  CAS  Google Scholar 

  17. Rennard, S. I., Stier, L. E., and Crystal, R. G. (1982) Intracellular degradation of newly synthesized collagen. J. Invest. Dermatol. 79(Suppl 1), 77s–82s.

    Article  PubMed  Google Scholar 

  18. Berg, R. A., Schwartz, M. L., and Crystal, R. G. (1980) Regulation of the production of secretory proteins: intracellular degradation of newly synthesized “defective” collagen. Proc. Natl. Acad. Sci. USA 77(8), 4746–4750.

    Article  PubMed  CAS  Google Scholar 

  19. Barile, F. A., Guzowski, D. E., Ripley, C., Siddiqi, Z. A., and Bienkowski, R. S. (1990) Ammonium chloride inhibits basal degradation of newly synthesized collagen in human fetal lung fibroblasts. Arch Biochem. Biophys. 276(1), 125–131.

    Article  PubMed  CAS  Google Scholar 

  20. Berg, R. A., Schwartz, M. L., Rome, L. H., and Crystal, R. G. (1984) Lysosomal function in the degradation of defective collagen in cultured lung fibroblasts. Biochemistry 23(10), 2134–2138.

    Article  PubMed  CAS  Google Scholar 

  21. Fisher, L. W., Stubbs, J. T., III, and Young, M. F. (1995) Antisera and cDNA probes to human and certain animal model bone matrix noncollagenous proteins. Acta. Orthop. Scand. 266(Suppl), 61–65.

    CAS  Google Scholar 

  22. Fisher, L. W., Lindner, W., Young, M. F., and Termine, J. D. (1989) Synthetic peptide antisera: their production and use in the cloning of matrix proteins. Connect Tissue Res. 21(1–4), 43–48.

    Article  PubMed  CAS  Google Scholar 

  23. Ririe, K. M., Rasmussen, R. P., and Wittwer, C. T. (1997) Product differentiation by analysis of DNA melting curves during the polymerase chain reaction. Anal. Biochem. 245(2), 154–160.

    Article  PubMed  CAS  Google Scholar 

  24. Barsh, G. S., Roush, C. L., and Gelinas, R. E. (1984) DNA and chromatin structure of the human alpha 1 (I) collagen gene. J. Biol. Chem. 259(23), 14,906–14,913.

    PubMed  CAS  Google Scholar 

  25. Pfarr, D. S., Rieser, L. A., Woychik, R. P., Rottman, F. M., Rosenberg, M., and Reff, M. E. (1986) Differential effects of polyadenylation regions on gene expression in mammalian cells. DNA 5(2), 115–122.

    Article  PubMed  CAS  Google Scholar 

  26. Maatta, A., Ekholm, E., and Penttinen, R. P. Effect of the 3′-untranslated region on the expression levels and mRNA stability of alpha 1(I) collagen gene. Biochim. Biophys. Acta 1260(3), 294–300.

    Google Scholar 

  27. Fine, A., Matsui, R., Zhan, X., Poliks, C. F., Smith, B. D., and Goldstein, R. H. (1992) Discordant regulation of human type I collagen genes by prostaglandin E2. Biochim. Biophys. Acta 1135(1), 67–72.

    Article  PubMed  CAS  Google Scholar 

  28. Rossert, J., Terraz, C., and Dupont, S. (2000) Regulation of type I collagen genes expression. Nephrol. Dial Transplant. 15(Suppl 6), 66–68.

    Article  PubMed  CAS  Google Scholar 

Download references

Acknowledgments

This work was supported by the National Institutes of Health grants K08-HL04232 and R01-HL66547 and the VA Research Enhancement Award Program.

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2005 Humana Press Inc.

About this protocol

Cite this protocol

Rishikof, D.C., Kuang, PP., Subramanian, M., Goldstein, R.H. (2005). Methods for Measuring Type I Collagen Synthesis In Vitro. In: Varga, J., Brenner, D.A., Phan, S.H. (eds) Fibrosis Research. Methods in Molecular Medicine, vol 117. Humana Press. https://doi.org/10.1385/1-59259-940-0:129

Download citation

  • DOI: https://doi.org/10.1385/1-59259-940-0:129

  • Publisher Name: Humana Press

  • Print ISBN: 978-1-58829-479-1

  • Online ISBN: 978-1-59259-940-0

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics