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Identification of DNA-Microsatellite Markers for the Characterization of Somatic Embryos in Quercus suber

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Microsatellites

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1006))

Abstract

Nuclear DNA-microsatellite markers led the possibility to characterize individually both Quercus suber trees and somatic embryos. The genotype inferred by SSR markers opens the possibility to obtain a fingerprint for clonal lines identification. Furthermore, allow to infer the origin of somatic embryos from haploid cells (microspores) or from diploid tissues. Using few SSR markers from other Quercus species and an automatic system based in fluorescence, it is possible to obtain a high discrimination power between genotypes. This method is sufficient to assign tissues to an individual tree with high statistical certainty. Nevertheless, it is necessary to take care to select the adequate DNA extraction method to avoid PCR inhibitors present in diverse Q. suber tissues.

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Gómez-Garay, A., Bueno, Á., Pintos, B. (2013). Identification of DNA-Microsatellite Markers for the Characterization of Somatic Embryos in Quercus suber . In: Kantartzi, S. (eds) Microsatellites. Methods in Molecular Biology, vol 1006. Humana Press, Totowa, NJ. https://doi.org/10.1007/978-1-62703-389-3_8

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  • DOI: https://doi.org/10.1007/978-1-62703-389-3_8

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  • Publisher Name: Humana Press, Totowa, NJ

  • Print ISBN: 978-1-62703-388-6

  • Online ISBN: 978-1-62703-389-3

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