Skip to main content

Rapid Screening Platform for Stabilization of scFvs in Escherichia coli

  • Protocol
  • First Online:
Therapeutic Antibodies

Part of the book series: Methods in Molecular Biology™ ((MIMB,volume 525))

Abstract

The poor biophysical properties of antibody fragments such as scFvs and diabodies can preclude their use as therapeutic agents. The non-ideal biophysical properties and insufficient thermal stability of antibody fragments often leads to poor expression, poor solubility, and a predisposition of the proteins to aggregate. We have developed a general platform for engineering stability into antibody fragments. By promoting Escherichia coli cultures to secrete scFvs directly into growth media, automated screening methods can be applied to empirically evaluate multiple stability design strategies including rational, sequence-based, and structure-based designs. Once stabilized, these antibody fragments demonstrate improved expression and durability during purification, handling, and storage. Stabilized antibody fragments can also be used as building blocks for multivalent or bispecific antibody-like molecules.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 139.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 179.00
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 219.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Presta, L. (2003) Antibody engineering for therapeutics. Curr. Opin. Struct. Biol. 13, 519–525

    Article  PubMed  CAS  Google Scholar 

  2. Sensel, M.G., Coloma, M.J., Harvill, E.T., Shin, S.U., Smith, R.I., and Morrison, S.L. (1997) Engineering novel antibody molecules. Chem. Immunol. 65, 129–168

    Article  PubMed  CAS  Google Scholar 

  3. Fischer, N. and Léger, O. (2007) Bispecific antibodies: molecules that enable novel therapeutic strategies. Pathobiology 74, 3–14

    Article  PubMed  CAS  Google Scholar 

  4. Röthlisberger, D., Honegger, A., and Plückthun. A. (2005) Domain interactions in the Fab fragment: a comparative evaluation of the single-chain Fv and Fab format engineered with variable domains of different stability. J. Mol. Biol. 347, 773–789

    Article  PubMed  Google Scholar 

  5. Garber, E. and Demarest, S.J. (2007) A broad range of Fab stabilities within a host of therapeutic IgGs. Biochem. Biophys. Res. Commun. 335, 751–757

    Article  Google Scholar 

  6. Ewert, S., Huber, T., Honegger, A., and Plückthun, A. (2003) Biophysical properties of human antibody variable domains. J. Mol. Biol. 325, 531–553

    Article  PubMed  CAS  Google Scholar 

  7. Wörn, A., and Plückthun, A. (2001) Stability engineering of antibody single-chain Fv fragments. J. Mol. Biol. 385, 989–1010

    Article  Google Scholar 

  8. Ewert, S., Honegger, A., and Plückthun, A. (2004) Stability improvement of antibodies for extracellular and intracellular applications: CDR grafting to stable frameworks and structure-based framework engineering. Methods 34, 184–199

    Article  PubMed  CAS  Google Scholar 

  9. Reiter, Y. and Pastan, I. (1996) Antibody engineering of recombinant Fv immunotoxins for improved targeting of cancer: disulfide-stabilized Fv immunotoxins. Clin. Cancer Res. 2, 245–52

    PubMed  CAS  Google Scholar 

  10. Ewert, S., Honegger, A., and Plückthun, A. (2003) Structure-based improvement of the biophysical properties of immunoglobulin VH domains with a generalizable approach. Biochemistry 42, 1517–1528

    Article  PubMed  CAS  Google Scholar 

  11. Steipe, B. (1999) Evolutionary approaches to protein engineering. Curr. Top. Microbiol. Immunol. 243, 55–86

    PubMed  CAS  Google Scholar 

  12. Demarest, S.J., Chen, G., Kimmel, B.E., Gustafson, D., Wu, J., Salbato, J., Poland, J., Elia, M., Tan, X., Wong, K., Short, J., and Hansen, G. (2006) Engineering stability into Escherichia coli secreted Fabs leads to increased functional expression. Protein Eng. Des. Select. 19, 325–336

    Article  CAS  Google Scholar 

  13. Jung, S., Honegger, A., and Plückthun, A. (1999) Selection for improved protein stability by phage display. J. Mol. Biol. 294, 163–180

    Article  PubMed  CAS  Google Scholar 

  14. Jermutus, L., Honegger, A., Schwesinger, F., Hanes, J., and Plückthun, A. (2001) Tailoring in vitro evolution for protein affinity or stability. Proc. Natl. Acad. Sci. USA 98, 75–80

    Article  PubMed  CAS  Google Scholar 

  15. Graff, C.P., Chester, K., Begent, R., and Wittrup, K.D. (2004) Directed evolution of an anti-carcinoembryonic antigen scFv with a 4-day monovalent dissociation half-time at 37°C. Protein Eng. Des. Select. 17, 293–304

    Article  CAS  Google Scholar 

  16. Michaelson, J.S., Demarest S. J. , Miller, B. M., Amatucci, A., Hughes, I., Snyder, W. B, Wu, W., Huang, F., Phan, S., Gao, S., Doern, A. Lugovskoy, A., Joseph, I., Bailly, V., Wang, X., Garber, E., Browning, J., and Glaser, S. M. Anti-tumor activity of stability-engineered IgG-like bispecific antibodies targeting Trail-R2 and LTbetaR. Submitted for publication.

    Google Scholar 

  17. Miler, B.R., Demarest, S.J., Lugovskoy, A., Glaser, S. M. Stability engineering of scFvs as enabling technology for the production of bispecific antibody therapeutics. Submitted for publication.

    Google Scholar 

  18. Yang, J., Moyana, T., MacKenzie, S., Xia, Q., Xiang, J. (1998) One hundred seventy-fold increase in excretion of an FV fragment-tumor necrosis factor alpha fusion protein (sFV/TNF-alpha) from Escherichia coli caused by the synergistic effects of glycine and Triton X-100. Appl. Environ. Microbiol. 64, 2869–74

    PubMed  CAS  Google Scholar 

  19. Sambrook, J., Fritsch, E. F., and Maniatis, M., (2001) Molecular Cloning. 3rd ed. Cold Spring Harbor Laboratory Press, New York.

    Google Scholar 

Download references

Acknowledgments

The authors would like to thank Ina Hughes, Xuifeng Wu, and Flora Huang for technical assistance with these experiments.

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2009 Humana Press, a part of Springer Science+Business Media, LLC

About this protocol

Cite this protocol

Miller, B.R., Glaser, S.M., Demarest, S.J. (2009). Rapid Screening Platform for Stabilization of scFvs in Escherichia coli . In: Dimitrov, A. (eds) Therapeutic Antibodies. Methods in Molecular Biology™, vol 525. Humana Press. https://doi.org/10.1007/978-1-59745-554-1_14

Download citation

  • DOI: https://doi.org/10.1007/978-1-59745-554-1_14

  • Published:

  • Publisher Name: Humana Press

  • Print ISBN: 978-1-934115-92-3

  • Online ISBN: 978-1-59745-554-1

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics