Skip to main content

Quantitative Profiling of Chaperone/Client Interactions with LUMIER Assay

  • Protocol
  • First Online:
Chaperones

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1709))

Abstract

Chaperones associate with hundreds or thousands of diverse client proteins and regulate their function. Chaperone/client interactions are generally very transient and involve a highly orchestrated assembly and disassembly of regulatory co-factors. This poses specific challenges for identifying and characterizing these interactions in a scalable and sensitive manner. LUMIER assay, which takes advantage of the high sensitivity and linear range of luminescence-based detection, has proven to be an ideal assay to quantitatively profile chaperone/client interactions in a high-throughput manner. This article provides step-by-step instructions for quantitatively profiling these interactions with LUMIER.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 99.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 129.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 199.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Snider J, Kotlyar M, Saraon P et al (2015) Fundamentals of protein interaction network mapping. Mol Syst Biol 11:848–848

    Article  PubMed  PubMed Central  Google Scholar 

  2. Barrios-Rodiles M, Brown KR, Ozdamar B et al (2005) High-throughput mapping of a dynamic signaling network in mammalian cells. Science (New York, NY) 307:1621–1625

    Article  CAS  Google Scholar 

  3. Taipale M, Tucker G, Peng J et al (2014) A quantitative chaperone interaction network reveals the architecture of cellular protein homeostasis pathways. Cell 158:434–448

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  4. Taipale M, Krykbaeva I, Koeva M et al (2012) Quantitative analysis of hsp90-client interactions reveals principles of substrate recognition. Cell 150:987–1001

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  5. Taipale M, Krykbaeva I, Whitesell L et al (2013) Chaperones as thermodynamic sensors of drug-target interactions reveal kinase inhibitor specificities in living cells. Nat Biotechnol 31:630–637

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  6. Jia S, Peng J, Gao B et al (2011) Relative quantification of protein-protein interactions using a dual luciferase reporter pull-down assay system. PLoS One 6:e26414

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  7. Trepte P, Buntru A, Klockmeier K et al (2015) DULIP: a dual luminescence-based co-immunoprecipitation assay for interactome mapping in mammalian cells. J Mol Biol 427:3375–3388

    Article  CAS  PubMed  Google Scholar 

  8. Braun P, Tasan M, Dreze M et al (2009) An experimentally derived confidence score for binary protein-protein interactions. Nat Methods 6:91–97

    Article  CAS  PubMed  Google Scholar 

  9. Hall MP, Unch J, Binkowski BF et al (2012) Engineered luciferase reporter from a deep sea shrimp utilizing a novel imidazopyrazinone substrate. ACS Chem Biol 7:1848–1857

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  10. Tannous BA, Kim D-E, Fernandez JL et al (2005) Codon-optimized Gaussia luciferase cDNA for mammalian gene expression in culture and in vivo. Mol Ther 11:435–443

    Article  CAS  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Mikko Taipale .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2018 Springer Science+Business Media, LLC

About this protocol

Check for updates. Verify currency and authenticity via CrossMark

Cite this protocol

Taipale, M. (2018). Quantitative Profiling of Chaperone/Client Interactions with LUMIER Assay. In: Calderwood, S., Prince, T. (eds) Chaperones. Methods in Molecular Biology, vol 1709. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-7477-1_4

Download citation

  • DOI: https://doi.org/10.1007/978-1-4939-7477-1_4

  • Published:

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-7476-4

  • Online ISBN: 978-1-4939-7477-1

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics