1. Foreword

   • Michael S. Waterman

   EditorialNotes Pages: 1 - 4

2. Approximate matching of regular expressions

   • Eugene W. Myers
   • Webb Miller

   OriginalPaper Pages: 5 - 37

3. Algorithms for the optimal identification of segment neighborhoods

   • Ivan E. Auger
   • Charles E. Lawrence

   OriginalPaper Pages: 39 - 54

4. The alignment of protein structures in three dimensions

   • M. Zuker
   • R. L. Somorjai

   OriginalPaper Pages: 55 - 78

5. Stochastic models for heterogeneous DNA sequences

   • Gary A. Churchill

   OriginalPaper Pages: 79 - 94

6. Codon preference and primary sequence structure in protein-coding regions

   • Simon Tavaré
   • Brenda Song

   OriginalPaper Pages: 95 - 115

7. Probabilistic models of genome shuffling

   • David Sankoff
   • Martin Goldstein

   OriginalPaper Pages: 117 - 124

8. Tutorial on large deviations for the binomial distribution

   • R. Arratia
   • L. Gordon

   OriginalPaper Pages: 125 - 131

9. Weak hierarchies associated with similarity measures—An additive clustering technique

   • H. -J. Bandelt
   • A. W. M. Dress

   OriginalPaper Pages: 133 - 166

10. A continuous analog for RNA folding

    • Vincent Ferretti
    • David Sankoff

    OriginalPaper Pages: 167 - 171

11. Computational experience with an algorithm for tetrangle inequality bound smoothing

    • Peter L. Easthope
    • Timothy F. Havel

    OriginalPaper Pages: 173 - 194

12. Editorial: Software survey section

    EditorialNotes Pages: I - IV