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Identification of QTLs for resistance to anthracnose to two Colletotrichum species in pepper

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Abstract

Pepper (Capsicum spp.) anthracnose caused by Colletotrichum spp. is a serious disease damaging pepper production in Asian monsoon regions. For QTL mapping analyses of anthracnose resistance, an introgression BC1F2 population was made by interspecific crosses between Capsicum annuum ‘SP26’ (susceptible recurrent parent) and Capsicum baccatum ‘PBC81’ (resistant donor). Both green and red fruits were inoculated with C. acutatum ‘KSCa-1’ and C. capsici ‘ThSCc-1’ isolates and the disease reactions were evaluated by disease incidence, true lesion diameter, and overall lesion diameter. On the whole, distribution of anthracnose resistance was skewed toward the resistant parent. It might indicate that one or two major QTLs are present. The introgression map consisting of 13 linkage groups with a total of 218 markers (197 AFLP and 21 SSR), covering a total length of 325 cM was constructed. Composite interval mapping analysis revealed four QTLs for resistance to ‘KSCa-1’ and three QTLs for ‘ThSCc-1’ isolate, respectively. Interestingly, the major QTLs (CaR12.2 and CcR9) for resistance to C. acutatum and C. capsici, respectively, were differently positioned but there were close links between the minor QTL CcR12.2 for C. capsici and major QTL CaR12.2 as well as the minor QTL CaR9 for C. acutatum and major QTL CcR9. These results will be helpful for marker-assisted selection and pyramiding two different anthracnose-resistant genes in commercial pepper breeding.

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References

  • AVRDC. 1999. Studies on pepper anthracnose. In AVRDC Report 1998, Shanhua, Taiwan: AVRDC-the World Vegetable Center), pp 27–30

    Google Scholar 

  • AVRDC. 2000. Generation and RAPD verification of Capsicum interspecific hybrids for developing interspecific hybrids for developing anthracnose resistant peppers. In AVRDC Report 1999, Shanhua, Taiwan: AVRDC-the World Vegetable Center, pp 18–19

    Google Scholar 

  • AVRDC. 2003. Host resistance to pepper anthracnose. In AVRDC Report 2002, Shanhua, Taiwan: AVRDC-the World Vegetable Center, pp 29–30

    Google Scholar 

  • Kang BK, Min JY, Kim YS, Park SW, Bach NV, Kim HT. 2005. Semi-selective medium for monitoring Colletotrichum acutatum causing pepper anthracnose in the field. Res. Plant Dis. 11: 21–27

    Google Scholar 

  • Kim SH, Yoon JB, Do JW, Park HG. 2008. A major recessive gene associated with anthracnose resistance to Colletotrichum capsici in chili pepper (Capsicum annuum L.). Breed. Sci. 58: 137–141

    Article  Google Scholar 

  • Kosambi DD. 1944. The estimation of map distance from recombination value. Ann. Eug. 12: 172–175

    Google Scholar 

  • Lee HR, Bae IH, Park SW, Kim HJ, Min WK, Han JH, Kim KT, Kim BD. 2009. Construction of an integrated pepper map using RFLP, SSR, CAPS, AFLP, WRKY, rRAMP, and BAC end sequences. Mol. Cells 27: 21–37

    Article  CAS  PubMed  Google Scholar 

  • Lee JM, Nahm SH, Kim YM, Kim BD. 2004. Characterization and molecular genetic mapping of microsatellite loci in pepper. Theor. Appl. Genet. 108: 619–627

    Article  CAS  PubMed  Google Scholar 

  • Lin Q, Kanchana UC, Jaunet T, Mongkolporn O. 2002. Genetic analysis of resistance to pepper anthracnose caused by Colletotrichum capsici. Thai J. Agric. Sci. 35: 259–264

    Google Scholar 

  • Lincoln S, Daly M, Lander E. 1993. Constructing genetic linkage maps with MAPMAKER/EXP. Version 3.0. Whitehead Institute for Biomedical Research Technical Report, 3rd Ed

  • Pakdeevaraporn P, Wasee S, Taylor PWJ, Mongkolporn O. 2005. Inheritance of resistance to anthracnose caused by Colletotrichum capsici in Capsicum. Plant Breed. 124: 206–208

    Article  Google Scholar 

  • Park HK, Kim BS, Lee WS. 1990. Inheritance of resistance to anthracnose (Colletotrichum spp.) in pepper (Capsicum annuum L.) II. Genetic analysis of resistance to Colletotrichum dematium. J. Kor. Soc. Hort. Sci. 31: 207–212

    Google Scholar 

  • Park KS, Kim CH. 1992. Identification, distribution and etiological characteristics of anthracnose fungi of red pepper in Korea. Kor. J. Plant Pathol. 8: 61–69

    Google Scholar 

  • Than PP, Jeewon R, Hyde KD, Pongsupasamit S, Mongkolporn O, Taylor PWJ. 2008. Characterization and pathogenicity of Colletotrichum species associated with anthracnose on chilli (Capsicum spp.) in Thailand. Plant Pathol. 57: 562–572

    Article  Google Scholar 

  • Voorrips RE. 2002. MAPCHART: software for the graphical presentation of linkage maps and QTLs. J. Hered. 93: 77–78

    Article  CAS  PubMed  Google Scholar 

  • Voorrips RE, Finkers R, Sanjaya L, Groenwold R. 2004. QTL mapping of anthracnose (Colletotrichum spp.) resistance in a cross between Capsicum annuum and C. chinense. Theor. Appl. Genet. 109: 1275–1282

    Article  PubMed  Google Scholar 

  • Vos P, Hogers R, Bleeker M, Reijans M, van de Lee T, Hornes M, Fritjers A, Pot J, Paleman J, Kuiper M, Zabeau M. 1995. AFLP: A new technique for DNA fingerprinting. Nucleic Acids Res. 23: 4407–4414

    Article  CAS  PubMed  Google Scholar 

  • Wang S, Basten CJ, Gaffney P, Zeng ZB. 2007. Windows QTL Cartographer. Bioinformatics Research Center, North Carolina State University, Raleigh, NC

    Google Scholar 

  • Yi G, Lee JM, Lee S, Choi D, Kim BD. 2006. Exploitation of pepper EST-SSRs and an SSR-based linkage map. Theor. Appl. Genet. 114: 113–130

    Article  CAS  PubMed  Google Scholar 

  • Yoon JB, Park HG. 2005. Trispecies bridge crosses, (Capsicum annuum x C. chinense) x C. baccatum, as an alternative for introgression of anthracnose resistance from C. baccatum into C. annuum. J. Kor. Soc. Hort. Sci. 46: 5–9

    Google Scholar 

  • Yoon JB, Yang DC, Do JW, Park HG. 2006. Overcoming two post-fertilization genetic barriers in interspecific hybridization between Capsicum annuum and C. baccatum for introgression of anthracnose resistance. Breed. Sci. 56: 31–38

    Article  CAS  Google Scholar 

  • Yoon JB, Yang DC, Lee WP, Ahn SY, Park HG. 2004. Genetic resources resistant to anthracnose in the genus Capsicum. J. Kor. Soc. Hort. Sci. 45: 318–323

    Google Scholar 

  • Yoon JB, Park HG. 2001. Screening method for resistance to pepper fruit anthracnose: pathogen sporulation, inoculation methods related to inoculum concentrations and post-inoculation environments. J. Kor. Soc. Hort. Sci. 42: 389–393

    Google Scholar 

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Correspondence to Jae Bok Yoon.

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Lee, J., Hong, JH., Do, J.W. et al. Identification of QTLs for resistance to anthracnose to two Colletotrichum species in pepper. J. Crop Sci. Biotechnol. 13, 227–233 (2010). https://doi.org/10.1007/s12892-010-0081-0

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  • DOI: https://doi.org/10.1007/s12892-010-0081-0

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