Skip to main content
Log in

A Stochastic Version of the Eigen Model

  • Original Article
  • Published:
Bulletin of Mathematical Biology Aims and scope Submit manuscript

Abstract

We exhibit a stochastic discrete time model that produces the Eigen model (Naturwissenschaften 58:465–523, 1971) in the deterministic and continuous time limits. The model is based on the competition among individuals differing in terms of fecundity but with the same viability. We explicitly write down the Markov matrix of the discrete time stochastic model in the two species case and compute the master sequence concentration numerically for various values of the total population. We also obtain the master equation of the model and perform a Van Kampen expansion. The results obtained in the two species case are compared with those coming from the Eigen model. Finally, we comment on the range of applicability of the various approaches described, when the number of species is larger than two.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Alves, D., Fontanari, J.F., 1998. Error threshold in finite populations. Phys. Rev. E 57, 7008–7013.

    Article  Google Scholar 

  • Bonnaz, D., Koch, A.J., 1998. Stochastic model of evolving populations. J. Phys. A: Math. Gen. 31, 417–429.

    Article  MATH  MathSciNet  Google Scholar 

  • Campos, P.R.A., Fontanari, J.F., 1999. Finite-size scaling of the error threshold transition in finite populations. J. Phys. A: Math. Gen. 32, L1–L7.

    Article  Google Scholar 

  • Demetrius, L., Schuster, P., Sigmund, K., 1985. Polynucleotide evolution and branching processes. Bull. Math. Biol. 47, 239–262.

    MATH  MathSciNet  Google Scholar 

  • Eigen, M., 1971. Selforganization of matter and the evolution of biological macromolecules. Naturwissenschaften 58, 465–523.

    Article  Google Scholar 

  • Grimstead, C.M., Snell, J.L., 1997. Introduction to Probability: Second Revised Edition. AMS, Providence.

    Google Scholar 

  • Jones, B.L., Enns, R.H., Ragnekar, S.S., 1976. On the theory of selection of coupled macromolecular systems. Bull. Math. Biol. 38, 12–28.

    Google Scholar 

  • Jones, B.L., Leung, H.K., 1981. Stochastic analysis of a nonlinear model for selection of biological macromolecules. Bull. Math. Biol. 43, 665–680.

    MATH  MathSciNet  Google Scholar 

  • McCaskill, J.S., 1984. A stochastic theory of macromolecular evolution. Biol. Cybern. 50, 63–73.

    Article  MATH  Google Scholar 

  • Moran, P.A.P., 1976. Global stability of genetic systems governed by mutation and selection. Math. Proc. Camb. Philos. Soc. 80, 331–336.

    Article  MATH  Google Scholar 

  • Nowak, M., Schuster, P., 1989. Error thresholds of replication in finite populations. Mutation frequencies and the onset of Muller’s ratchet. J. Theor. Biol. 137, 375–395.

    Article  Google Scholar 

  • Summers, J., Litwin, S., 2006. Examining the theory of error catastrophe. J. Virol. 80, 20–26.

    Article  Google Scholar 

  • Swetina, J., Schuster, P., 1982. Self-replication with errors. A model for polynucleotide replication. Biophys. Chem. 16, 329–345.

    Article  Google Scholar 

  • Thompson, C.J., McBride, J.L., 1974. On Eigen’s theory of self-organization of matter and the evolution of macromolecules. Math. Biosci. 21, 127–142.

    Article  MATH  MathSciNet  Google Scholar 

  • Van Kampen, N.G., 2007. Stochastic Processes in Physics and Chemistry. North-Holland Personal Library, Amsterdam.

    Google Scholar 

  • Zhang, Y.-C., 1997. Quasispecies evolution of finite populations. Phys. Rev. E 55, R3817–R3819.

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Fabio Musso.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Musso, F. A Stochastic Version of the Eigen Model. Bull. Math. Biol. 73, 151–180 (2011). https://doi.org/10.1007/s11538-010-9525-4

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s11538-010-9525-4

Keywords

Navigation