Abstract
With increasing temperature, lipid bilayers undergo a gel-fluid phase transition, which plays an essential role in many physiological phenomena. In the present work, this first-order phase transition was investigated for variable heating and cooling rates for a dipalmitoylphosphatidylcholine (DPPC) lipid bilayer by means of atomistic molecular dynamics simulations. Alternative methods to track the melting temperature \(T_m\) are compared. The resulting \(T_m\) is shown to be independent of the scan rate for small heating rates (0.05–0.3 K/ns) implying reversible melting, and increases for larger heating (0.3–4 K/ns) or cooling rates (2–0.1 K/ns). The reported dependency of the melting temperature on the heating rate is in perfect agreement with a two-state kinetic rate model as suggested previously. Expansion and shrinkage, as well as the dynamics of melting seeds is described. The simulations further exhibit a relative shift between melting seeds in opposing membrane leaflets as predicted from continuum elastic theory.
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Andersen SS, Jackson AD, Heimburg T (2009) Towards a thermodynamic theory of nerve pulse propagation. Prog Neurobiol 88(2):104–113
Andreoli TE, Hoffman JF, Fanestil DD, Schultz SG (1980) Membrane physiology. Springer, Berlin
Armstrong CL, Barrett M, Toppozini L, Kučerka N, Yamani Z, Katsaras J, Fragneto G, Rheinstädter MC (2012) Co-existence of gel and fluid lipid domains in single-component phospholipid membranes. Soft Matter 8(17):4687–4694
Biltonen RL, Lichtenberg D (1993) The use of differential scanning calorimetry as a tool to characterize liposome preparations. Chem Phys Lipids 64(1):129–142
Black S, Dixon G (1981) Alternating current calorimetry of dimyristoylphosphatidylcholine multilayers: hysteresis and annealing near the gel to liquid-crystal transition. Biochemistry 20(23):6740–6744
Blicher A, Wodzinska K, Fidorra M, Winterhalter M, Heimburg T (2009) The temperature dependence of lipid membrane permeability, its quantized nature, and the influence of anesthetics. Biophys J 96(11):4581–4591
Blume A (1983) Apparent molar heat capacities of phospholipids in aqueous dispersion. Effects of chain length and head group structure. Biochemistry 22(23):5436–5442
Brooks BR, Bruccoleri RE, Olafson BD, Swaminathan S, Karplus M et al (1983) Charmm: a program for macromolecular energy, minimization, and dynamics calculations. J Comput Chem 4(2):187–217
Bussi G, Donadio D, Parrinello M (2007) Canonical sampling through velocity rescaling. J Chem Phys 126(1):014,101
Callen H (1960) Thermodynamics: an introduction to the physical theories of equilibrium thermostatics and irreversible thermodynamics. Wiley, New York
Cevc G, Richardsen H (1999) Lipid vesicles and membrane fusion. Adv Drug Deliv Rev 38(3):207–232
Chapman D (1975) Phase transitions and fluidity characteristics of lipids and cell membranes. Q Rev Biophys 8(02):185–235
Chapman D, Byrne P, Shipley G (1966) The physical properties of phospholipids. I. Solid state and mesomorphic properties of some 2, 3-diacyl-dl-phosphatidylethanolamines. Proc R Soc Lond Ser A 290(1420):115–142
Chapman D, Williams R, Ladbrooke B (1967) Physical studies of phospholipids. VI. Thermotropic and lyotropic mesomorphism of some 1, 2-diacyl-phosphatidylcholines (lecithins). Chem Phys Lipids 1(5):445–475
Darden T, York D, Pedersen L (1993) Particle mesh Ewald: an N\(\cdot\) log (N) method for Ewald sums in large systems. J Chem Phys 98(10):089
Davies MA, Brauner JW, Schuster HF, Mendelsohn R (1990) A quantitative infrared determination of acyl chain conformation in gramicidin/dipalmitoylphosphatidylcholine mixtures. Biochem Biophys Res Commun 168(1):85–90
Davis JH (1979) Deuterium magnetic resonance study of the gel and liquid crystalline phases of dipalmitoyl phosphatidylcholine. Biophys J 27(3):339
Debnath A, Thakkar FM, Maiti PK, Kumaran V, Ayappa K (2014) Laterally structured ripple and square phases with one and two dimensional thickness modulations in a model bilayer system. Soft Matter 10(38):7630–7637
Devaux P, McConnell H (1972) Lateral diffusion in spin-labeled phosphatidylcholine multilayers. J Am Chem Soc 94(13):4475–4481
de Vries AH, Yefimov S, Mark AE, Marrink SJ (2005) Molecular structure of the lecithin ripple phase. Proc Natl Acad Sci USA 102(15):5392–5396
Dickson CJ, Madej BD, Skjevik AA, Betz RM, Teigen K, Gould IR, Walker RC (2014) Lipid14: the Amber lipid force field. J Chem Theory Comput 10(2):865–879
Fanning DW (2000) IDL programming techniques. Fanning software consulting, Fort Collins
Feller SE, MacKerell AD (2000) An improved empirical potential energy function for molecular simulations of phospholipids. J Phys Chem B 104(31):7510–7515
Feller SE, Venable RM, Pastor RW (1997) Computer simulation of a DPPC phospholipid bilayer: structural changes as a function of molecular surface area. Langmuir 13(24):6555–6561
Galimzyanov TR, Molotkovsky RJ, Bozdaganyan ME, Cohen FS, Pohl P, Akimov SA (2012) Elastic membrane deformations govern interleaflet coupling of lipid-ordered domains. Phys Rev Lett 115(8):088,101
Ginnings D, Furukawa G (1953) Heat capacity standards for the range 14–1200 degrees K.-correction. J Am Chem Soc 75(24):6359–6359
Heimburg T (2000) A model for the lipid pretransition: coupling of ripple formation with the chain-melting transition. Biophys J 78(3):1154–1165
Heimburg T, Jackson AD (2005) On soliton propagation in biomembranes and nerves. Proc Natl Acad Sci USA 102(28):9790–9795
Henn FA, Thompson TE (1969) Synthetic lipid bilayer membranes. Annu Rev Biochem 38(1):241–262
Hess B, Bekker H, Berendsen HJ, Fraaije JG et al (1997) Lincs: a linear constraint solver for molecular simulations. J Comput Chem 18(12):1463–1472
Hess B, Kutzner C, Van Der Spoel D, Lindahl E (2008) GROMACS 4: algorithms for highly efficient, load-balanced, and scalable molecular simulation. J Chem Theory Comput 4(3):435–447
Hurley JH, Boura E, Carlson LA, Różycki B (2010) Membrane budding. Cell 143(6):875–887
Hömberg M, Müller M (2010) Main phase transition in lipid bilayers: phase coexistence and line tension in a soft, solvent-free, coarse-grained model. J Chem Phys 132(155):104
Janiak MJ, Small DM, Shipley GG (1976) Nature of the thermal pretransition of synthetic phospholipids: dimyristoyl- and dipalmitoyllecithin. Biochemistry 15(21):4575–4580
Janiak MJ, Small DM, Shipley GG (1979) Temperature and compositional dependence of the structure of hydrated dimyristoyl lecithin. J Biol Chem 254(13):6068–6078
Jorgensen WL, Chandrasekhar J, Madura JD, Impey RW, Klein ML (1983) Comparison of simple potential functions for simulating liquid water. J Chem Phys 79(2):926–935
Jämbeck JPM, Lyubartsev AP (2012) Derivation and systematic validation of a refined all-atom force field for phosphatidylcholine lipids. J Phys Chem B 116(10):3164–3179
Kharakoz D, Colotto A, Lohner K, Laggner P (1993) Fluid-gel interphase line tension and density fluctuations in dipalmitoylphosphatidylcholine multilamellar vesicles: an ultrasonic study. J Phys Chem 97(38):9844–9851
Kharakoz DP, Shlyapnikova EA (2000) Thermodynamics and kinetics of the early steps of solid-state nucleation in the fluid lipid bilayer. J Phys Chem B 104(44):10368–10378
Kissinger HE (1957) Reaction kinetics in differential thermal analysis. Anal Chem 29(11):1702–1706
Klauda JB, Venable RM, Freites JA, OConnor JW, Tobias DJ, Mondragon-Ramirez C, Vorobyov I, MacKerell AD Jr, Pastor RW (2010) Update of the CHARMM all-atom additive force field for lipids: validation on six lipid types. J Phys Chem B 114(23):7830–7843
Kociurzynski R, Pannuzzo M, Böckmann RA (2015) Phase transition of glycolipid membranes studied by coarse-grained simulations. Langmuir 31:9379–9387
Kowalik B, Schubert T, Wada H, Tanaka M, Netz RR, Schneck E (2015) Combination of MD simulations with two-state kinetic rate modeling elucidates the chain melting transition of phospholipid bilayers for different hydration levels. J Phys Chem B 119(44):14157–14167
Krasikova IN, Khotimchenko SV, Solov’eva TF, Ovodov YS (1995) Mutual influence of plasmid profile and growth temperature on the lipid composition of Yersinia pseudotuberculosis bacteria. Biochim Biophys Acta Lipids Lipid Metab 1257(2):118–124
Leekumjorn S, Sum AK (2007) Molecular studies of the gel to liquid-crystalline phase transition for fully hydrated DPPC and DPPE bilayers. Biochim Biophys Acta Biomembr 1768(2):354–365
Leontiadou H, Mark AE, Marrink SJ (2004) Molecular dynamics simulations of hydrophilic pores in lipid bilayers. Biophys J 86(4):2156–2164
Lippert J, Peticolas W (1972) Raman active vibrations in long-chain fatty acids and phospholipid sonicates. Biochim Biophys Acta Biomembr 282:8–17
Mabrey S, Sturtevant JM (1976) Investigation of phase transitions of lipids and lipid mixtures by sensitivity differential scanning calorimetry. Proc Natl Acad Sci USA 73(11):3862–3866
MacKerell AD, Bashford D, Bellott MLDR, Dunbrack RL, Evanseck JD, Field MJ, Fischer S, Gao J, Guo H, Ha S, Joseph-McCarthy D, Kuchnir L, Kuczera K, Lau FTK, Mattos C, Michnick S, Ngo T, Nguyen DT, Prodhom B, Reiher WE, Roux B, Schlenkrich M, Smith JC, Stote R, Straub J, Watanabe M, Wiórkiewicz-Kuczera J, Yin D, Karplus M (1998) All-atom empirical potential for molecular modeling and dynamics studies of proteins. J Phys Chem B 102(18):3586–3616
Marrink SJ, Peter Tieleman D (2002) Molecular dynamics simulation of spontaneous membrane fusion during a cubic-hexagonal phase transition. Biophys J 83(5):2386–2392
Marrink SJ, Risselada J, Mark AE (2005) Simulation of gel phase formation and melting in lipid bilayers using a coarse grained model. Chem Phys Lipids 135(2):223–244
Mendelsohn R, Davies M, Brauner J, Schuster H, Dluhy R (1989) Quantitative determination of conformational disorder in the acyl chains of phospholipid bilayers by infrared spectroscopy. Biochemistry 28(22):8934–8939
Nagai T, Ueoka R, Okamoto Y (2012) Phase behavior of a lipid bilayer system studied by a replica-exchange molecular dynamics simulation. J Phys Soc Jpn 81(024):002
Nagle JF (1980) Theory of the main lipid bilayer phase transition. Annu Rev Phys Chem 31(1):157–196
Nagle J (1993) Arealipid of bilayers from NMR. Biophys J 64(5):1476
Nagle J, Scott H (1978) Lateral compressibility of lipid mono-and bilayers. Theory of membrane permeability. Biochim Biophys Acta Biomembr 513(2):236–243
Neuenfeld S, Schick C (2006) Verifying the symmetry of differential scanning calorimeters concerning heating and cooling using liquid crystal secondary temperature standards. Thermochim Acta 446(1):55–65
Parrinello M, Rahman A (1981) Polymorphic transitions in single crystals: a new molecular dynamics method. J Appl Phys 52(12):7182–7190
Picquart M, Lefévre T (2003) Raman and fourier transform infrared study of phytol effects on saturated and unsaturated lipid multibilayers. J Raman Spectrosc 34(1):4–12
Pluhackova K, Böckmann RA (2015) Biomembranes in atomistic and coarse-grained simulations. J Phys Condens Matter 27(32):323,103
Pluhackova K, Kirsch SA, Han J, Sun L, Jiang Z, Unruh T, Böckmann RA (2016) A critical comparison of biomembrane force fields: structure and dynamics of model DMPC, POPC, and POPE bilayers. J Phys Chem B 120(16):3888–3903
Qin SS, Yu ZW, Yu YX (2009) Structural characterization on the gel to liquid-crystal phase transition of fully hydrated DSPC and DSPE bilayers. J Phys Chem B 113(23):8114–8123
Riske KA, Barroso RP, Vequi-Suplicy CC, Germano R, Henriques VB, Lamy MT (2009) Lipid bilayer pre-transition as the beginning of the melting process. Biochim Biophys Acta Biomembr 1788(5):954–963
Sandoval-Perez A, Pluhackova K, Böckmann RA (2017) Critical comparison of biomembrane force fields: protein-lipid interactions at the membrane interface. J Chem Theory Comput 13:2310–2321
Schmitt T, Frezzatti W, Schreier S (1993) Hemin-induced lipid membrane disorder and increased permeability: a molecular model for the mechanism of cell lysis. Arch Biochem Biophys 307(1):96–103
Schrödinger LLC (2015) The PyMOL molecular graphics system, version 1.8
Schubert T, Schneck E, Tanaka M (2011) First order melting transitions of highly ordered dipalmitoyl phosphatidylcholine gel phase membranes in molecular dynamics simulations with atomistic detail. J Chem Phys 135(055):105
Siu SWI, Pluhackova K, Böckmann RA (2012) Optimization of the OPLS-AA force field for long hydrocarbons. J Chem Theory Comput 8(4):1459–1470
Steim JM, Tourtellotte ME, Reinert JC, McElhaney RN, Rader RL (1969) Calorimetric evidence for the liquid-crystalline state of lipids in a biomembrane. Proc Natl Acad Sci USA 63(1):104–109
Tardieu A, Luzzati V, Reman F (1973) Structure and polymorphism of the hydrocarbon chains of lipids: a study of lecithin-water phases. J Mol Biol 75(4):711–733
Tenchov B (1991) On the reversibility of the phase transitions in lipid-water systems. Chem Phys Lipids 57(2):165–177
Traeubl H, Sackmann E (1972) Crystalline-liquid crystalline phase transition of lipid model membranes. III. Structure of a steroid-lecithin system below and above the lipid-phase transition. J Am Chem Soc 94(13):4499–4510
Trudell JR (1977) A unitary theory of anesthesia based on lateral phase separations in nerve membranes. Anesthesiology 46(1):5–10
Tsuchida K, Ohki K, Sekiya T, Nozawa Y, Hatta I (1987) Dynamics of appearance and disappearance of the ripple structure in multilamellar liposomes of dipalmitoylphosphatidylcholine. Biochim Biophys Acta Biomembr 898(1):53–58
Tu K, Tobias DJ, Klein ML (1995) Constant pressure and temperature molecular dynamics simulation of a fully hydrated liquid crystal phase dipalmitoylphosphatidylcholine bilayer. Biophys J 69(6):2558
Vega C, Abascal JL (2011) Simulating water with rigid non-polarizable models: a general perspective. Phys Chem Chem Phys 13(44):19663–19688
Wiener M, Suter R, Nagle J (1989) Structure of the fully hydrated gel phase of dipalmitoylphosphatidylcholine. Biophys J 55(2):315–325
Acknowledgements
This work was supported by the German Science Foundation (DFG) within the Research Training Group 1962—Dynamic Interactions at Biological Membranes, the SFB1027—Physical Modeling of Non-Equilibrium Processes in Biological Systems, and by a scholarship from the China Scholarship Council (CSC, to LS).
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Sun, L., Böckmann, R.A. Membrane phase transition during heating and cooling: molecular insight into reversible melting. Eur Biophys J 47, 151–164 (2018). https://doi.org/10.1007/s00249-017-1237-3
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DOI: https://doi.org/10.1007/s00249-017-1237-3