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Evidence that pepper mottle virus and potato virus Y are distinct viruses: analyses of the coat protein and 3′ untranslated sequence of a California isolate of pepper mottle virus

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Potyvirus Taxonomy

Part of the book series: Archives of Virology ((ARCHIVES SUPPL,volume 5))

Summary

Pepper mottle virus (PepMoV) is a member of the large and complex genus Potyvirus, and is classically distinguished from other members of the genus by differential host range and cytopathology as well as serology of the coat protein and cytoplasmic inclusion body proteins. Here we report the deduced amino acid sequence of the coat protein of a California potyvirus identified by a variety of classical methods as PepMoV (PepMoV C). Comparison of the 3′ untranslated nucleic acid sequence and the deduced coat-protein amino acid sequence of the PepMoV C isolate with those of PVY and other potyviruses indicates that PepMoV C is sufficiently diverged to be considered a distinct virus species. Thus, comparative sequence analyses of the PepMoV C isolate support earlier serological and biological evidence that PepMoV and PVY are distinct viruses.

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References

  1. Abdalla OA, Desjardins PR, Dodds JA (1991) Identification, disease incidence, and distribution of viruses infecting peppers in California. Plant Dis 75: 1019–1023.

    Article  Google Scholar 

  2. Allison R, Johnston RE, Dougherty WG (1986) The nucleotide sequence of the coding region of tobacco etch virus genomic RNA: evidence for the synthesis of a single polyprotein. Virology 154: 9–20.

    Article  PubMed  CAS  Google Scholar 

  3. Bravo-Almonacid FF, Mentaberry AN (1989) Nucleotide cDNA sequence coding for the PVY O coat protein. Nucleic Acids Res 17: 4401.

    Article  PubMed  CAS  Google Scholar 

  4. Christie RG, Edwardson JR (1977) Light and electron microscopy of plant virus inclusions. Fla Agric Exp Stat Monogr Ser, no 9

    Google Scholar 

  5. deMejia MVG, Hiebert E, Purcifull DE, Thornbury DW, Pirone TP (1985) Identification of potyviral amorphous inclusion protein as a nonstructural, virus-specific protein related to helper component. Virology 142: 34–43.

    Article  CAS  Google Scholar 

  6. Domier LL, Franklin KM, Shahabuddin M, Hellmann GM, Overmeyer JH, Hiremath ST, Siaw MFE, Lomonossoff GP, Shaw JG, Rhoads RE (1986) The nucleotide sequence of tobacco vein mottling virus RNA. Nucleic Acids Res 14: 5417–5430.

    Article  PubMed  CAS  Google Scholar 

  7. Dougherty WG, Allison RF, Parks TD, Johnston RE, Feild MJ, Armstrong FB (1985) Nucleotide sequence at the 3’ terminus of pepper mottle virus genomic RNA: evidence for an alternative mode of potyvirus capsid protein gene organization. Virology 146: 282–291.

    Article  PubMed  CAS  Google Scholar 

  8. Edwardson JR, Christie RG, Purcifull DE, Petersen MA (1992) Inclusions in diagnosing plant virus diseases. In: Matthews REF (ed) Diagnosis of plant virus diseases. CRC Press, Boca Raton (in press).

    Google Scholar 

  9. Feng D, Doolittle RF (1987) Progressive sequence alignment as a prerequisite to current phylogenetic trees. J Mol Evol 25: 351–360.

    Article  PubMed  CAS  Google Scholar 

  10. Francki RIB, Fauquet CM, Knudson DL, Brown F (eds) (1991) Classification and nosmenclature of viruses. Fifth report of the International Committee on Taxonomy of Viruses. Springer, Wien New York (Arch Virol [Suppl]2

    Google Scholar 

  11. Frenkel MJ, Ward CW, Shukla DD (1989) The use of 3’ NTR sequences on the taxonomy of potyviruses: application to watermelon mosaic virus 2 and soybean mosaic virus-N. J Gen Virol 70: 2775–2783.

    Article  PubMed  CAS  Google Scholar 

  12. Hammond J, Jordan RL, Larsen RC, Moyer JW (1991) Serological relationships among three filamentous viruses of sweet potato examined using polyclonal and monoclonal antibodies. Phytopathology 81: 1217.

    Google Scholar 

  13. Hampton RO, Shukla DD, Jordan RL (1992) White lupin mosaic virus: comparative host range, serology, and coat protein peptide profiles. Phytopathology 82: 566–571.

    Article  CAS  Google Scholar 

  14. Jordan RL, Hammond J (1991) Comparison and differentiation of potyvirus isolates and identification of strain-, virus-, subgroup-specific and potyvirus group-common epitopes using monoclonal antibodies. J Gen Virol 72: 25–36.

    Article  PubMed  Google Scholar 

  15. Maiss E, Timpe U, Brisske A, Jelkmann W, Casper R, Himmler G, Mattanovich D, Katinger HWD (1989) The complete nucleotide sequence of plum pox virus RNA. J Gen Virol 70:513–524.

    Article  PubMed  CAS  Google Scholar 

  16. Nelson MR, Wheeler RE (1972) A new virus disease of pepper in Arizona. Plant Dis Rep 56: 731–735.

    Google Scholar 

  17. Nelson MR, Wheeler RE (1978) Biological and serological charcterization and separation of potyviruses that infect peppers. Phytopathology 68: 979–984.

    Article  Google Scholar 

  18. Nelson MR, Wheeler RE, Zitter TA (1982) Pepper mottle virus. CMI/AAB Descriptions of Plant Viruses, no 253

    Google Scholar 

  19. Purcifull DE, Hiebert E, McDonald JG (1973) Immunochemical specificity of cytoplasmic inclusions induced by viruses in the potato Y group. Virology 55: 275–279.

    Article  PubMed  CAS  Google Scholar 

  20. Purcifull DE, Zitter TA, Hiebert E (1975) Morphology, host range and serological relationships of pepper mottle virus. Phytopathology 65: 559–562.

    Article  Google Scholar 

  21. Robaglia C, Durand-Tardif M, Tronchet M, Boudazin G, Astier-Manifacier S, Casse-Delbart F (1989) Nucleotide sequence of potato virus Y (N strain) genomic RNA. J Gen Virol 70: 935–947.

    Article  PubMed  CAS  Google Scholar 

  22. Shifriss C, Marco S (1980) Partial dominance of resistance to potato virus Y in Capsicum. Plant Dis 64: 57–59.

    Article  Google Scholar 

  23. Shukla DD, Ward CW (1988) Amino acid sequence homology of coat proteins as a basis for identification and classification of the potyvirus group. J Gen Virol 69: 2703–2710.

    Article  CAS  Google Scholar 

  24. Shukla DD, Ward CW (1989) Identification and classification of potyviruses on the basis of coat protein sequence data and serology. Arch Virol 106: 171–200.

    Article  PubMed  CAS  Google Scholar 

  25. Turpen T (1989) Molecular cloning of a potato virus Y genome: nucleotide sequence homology in non-coding regions of potyviruses. J Gen Virol 70: 1951–1960.

    Article  PubMed  CAS  Google Scholar 

  26. van der Vlugt RAA, Allefs S, DeHaan PT, Goldbach RW (1989) Nucleotide sequence of the 3’ terminal region of potato virus YN RNA. J Gen Virol 70: 229–233.

    Article  PubMed  Google Scholar 

  27. Zitter TA (1972) Naturally occurring pepper virus strains in Florida. Plant Dis Rep 56: 586–590.

    Google Scholar 

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Author information

Authors and Affiliations

  1. Department of Biological Sciences, University of South Carolina, Columbia, South Carolina, USA

    Vicki Bowman Vance

  2. U.S. Department of Agriculture, Agricultural Research Service, BARC-W, Beltsville, Maryland, USA

    R. Jordan

  3. Department of Agronomy, University of Florida, Gainsville, Florida, USA

    J. R. Edwardson & R. Christie

  4. Department Plant Pathology, University of Florida, Gainesville, Florida, USA

    D. E. Purcifull

  5. Biosource Genetics Corporation, Vacaville, California, USA

    T. Turpen

  6. Department of Plant Pathology, University of California, Davis, California, USA

    B. Falk

  7. Department of Biological Sciences, University of South Carolina, Columbia, SC, 29208, USA

    Vicki Bowman Vance

Authors
  1. Vicki Bowman Vance
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  2. R. Jordan
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  3. J. R. Edwardson
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  4. R. Christie
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  5. D. E. Purcifull
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  6. T. Turpen
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  7. B. Falk
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Editor information

Editors and Affiliations

  1. Department of Plant Pathology and Physiology, Clemson University, Clemson, South Carolina, USA

    Ortus W. Barnett Jr.

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© 1992 Springer-Verlag

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Vance, V.B. et al. (1992). Evidence that pepper mottle virus and potato virus Y are distinct viruses: analyses of the coat protein and 3′ untranslated sequence of a California isolate of pepper mottle virus. In: Barnett, O.W. (eds) Potyvirus Taxonomy. Archives of Virology, vol 5. Springer, Vienna. https://doi.org/10.1007/978-3-7091-6920-9_36

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  • DOI: https://doi.org/10.1007/978-3-7091-6920-9_36

  • Publisher Name: Springer, Vienna

  • Print ISBN: 978-3-211-82353-8

  • Online ISBN: 978-3-7091-6920-9

  • eBook Packages: Springer Book Archive

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