Abstract
Phytoremediation is an effective, non-intrusive, inexpensive, aesthetically pleasing, socially accepted, promising phytotechnology for the remediation of polluted soils. The objective of any soil remediation process must be not only to remove the contaminant(s) from the soil but, most importantly, to restore the continued capacity of the soil to perform or function according to its potential (i.e., to recover soil health). Hence, indicators of soil health are needed to properly assess the efficiency of a phytoremediation process. Biological indicators of soil health, especially those related to the size, activity and diversity of the soil microbial communities, are becoming increasingly used, due to their sensitivity and capacity to provide information that integrates many environmental factors. In particular, microbial indicators of soil health are valid tools to evaluate the success of metal phytoremediation procedures such as phytoextraction and phytostabilization processes.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
References
Alkorta I, Garbisu C (2001) Phytoremediation of organic contaminants in soils. Biores Technol 79:273–276
Alkorta I, Amezaga I, Albizu I, Aizpurua A, Onaindia M, Buchner V, Garbisu C (2003a) Molecular microbial biodiversity assessment: a biological indicator of soil health. Rev Environ Health 18:131–151
Alkorta I, Aizpurua A, Riga P, Albizu I, Amezaga I, Garbisu C (2003b) Soil enzyme activities as biological indicators of soil health. Rev Environ Health 18:65–73
Alkorta I, Albizu I, Amezaga I, Onaindia M, Buchner V, Garbisu C (2004a) Climbing a ladder: a step-by-step approach to understanding the concept of agroecosystem health. Rev Environ Health 19:141–159
Alkorta I, Hernández-Allica J, Becerril JM, Amezaga I, Albizu I, Garbisu C (2004b) Recent findings on the phytoremediation of soils contaminated with environmentally toxic heavy metals and metalloids such as zinc, cadmium, lead and arsenic. Rev Environ Sci Bio/Technol 3:71–90
Alkorta I, Hernández-Allica J, Garbisu C (2004c) Plants against the global epidemic of arsenic poisoning. Environ Int 30:949–951
Alkorta I, Hernández-Allica J, Becerril JM, Amezaga I, Albizu I, Onaindia M, Garbisu C (2004d) Chelate-enhanced phytoremediation of soils polluted with heavy metals. Rev Environ Sci Bio/Technol 3:55–70
Alkorta I, Epelde L, Mijangos I, Amezaga I, Garbisu C (2006) Bioluminiscent bacterial biosensors for the assessment of metal toxicity and bioavailability in soils. Rev Environ Health 21:121–134
Assunção AGL, Schat H, Aarts MGM (2003) Thlaspi caerulescens, an attractive model species to study heavy-metal hyperaccumulation in plants. New Phytol 159:351–360
Baker AJM, McGrath SP, Reeves RD, Smith JAC (2000) Metal hyperaccumulator plants: a review of the ecology and physiology of a biological resource for phytoremediation of metal-polluted soils. In: Terry N, Bañuelos G (eds) Phytoremediation of contaminated soil and water. Lewis Publisher, Boca Raton, pp 85–107
Bezdicek DF, Papendick RI, Lal R (1996) Introduction: importance of soil quality to health and sustainable land management. In: Doran JW, Jones AJ (eds) Methods for assessing soil quality. SSSA Special Publication 49, Soil Science Society of America, Madison WI, pp 1–8
Blaylock MJ, Salt DE, Dushenkov S, Zakharova O, Gussman C, Kapulnik Y, Ensley BD, Raskin I (1997) Enhanced accumulation of Pb in Indian mustard by soil-applied chelating agents. Environ Sci Technol 31:860–865
Chaney RL, Malik M, Li YM, Brown SL, Brewer EP, Angle JS, Baker AJM (1997) Phytoremediation of soil metals. Curr Opin Biotechnol 8:279–284
Coleman DC, Hendrix PF, Odum EP (1998) Ecosystem health: an overview. In: Huang PM, Adriano DC, Logan TJ, Checkai RT (eds) Soil chemistry and ecosystem health. Soil Science Society of America, Madison WI, pp 1–20
Collins YE, Stotzky G (1989) Factors affecting the toxicity of heavy metals to microbes. In: Beveridge TJ, Doyle RJ (eds) Metal ions and bacteria. Wiley, Toronto, pp 31–91
Costanza R, Norton BG, Haskell BD (1992) Ecosystem health. New goals for environmental management. Island Press, Washington DC
Costanza R, Mageau M, Norton B, Patten BC (1998) What´s sustainability? In: Rapport D, Costanza R, Epstein PR, Gaudet C, Levins R (eds) Ecosystem health. Blackwell Science, Oxford, pp 231–239
Cunningham SD, Berti WR (1993) Remediation of contaminated soils with green plants: an overview. Vitro Cell Dev Biol 29:207–212
Dasappa SM, Loehr RC (1991) Toxicity reduction in contaminated soil remediation processes. Water Res 25:1121–1130
Delorme TA, Gagliardi JV, Angle JS, Chaney RL (2001) Influence of the zinc hyperaccumulator Thlaspi caerulescens J & C. Presl. and the nonmetal accumulator Trifolium pratense L. on soil microbial populations. Can J Microbiol 47:773–776
Doran JW, Parkin TB (1994) Defining and assessing soil quality. In: Doran JW, Coleman DC, Bezdiceck DF, Stewart BA (eds) Defining soil quality for a sustainable environment. SSSA Special Publication 35, Soil Science Society of America, Madison WI, pp 3–21
Doran JW, Parkin TB (1996) Quantitative indicators of soil quality: a minimum data set. In: Doran JW, Jones AJ (eds) Methods for assessing soil quality. SSSA Special Publication 49, Soil Science Society of America, Madison, WI, pp 25–37
Doran JW, Safley M (1997) Defining and assessing soil health and sustainable productivity. In: Pankhurst CE, Doube BM, Gupta VVSR (eds) Biological indicators of soil health. CAB International, Wallingford, pp 1–28
Ebbs SD, Kochian LV (1997) Toxicity of zinc and copper to Brassica species: implications for phytoremediation. J Environ Qual 26:776–781
EPA (2000) Introduction to phytoremediation. National Risk Management Research Laboratory, Office of Research and Development, US Environmental Protection Agency, Cincinnati
Epelde L, Becerril JM, Hernández-Allica J, Barrutia O, Garbisu C (2008) Functional diversity as indicator of the recovery of soil health derived from Thlaspi caerulescens growth and metal phytoextraction. Appl Soil Ecol 39:299–310
Garbisu C, Alkorta I (1997) Bioremediation: principles and future. J Clean Technol Environ Toxicol Occup Med 6:351–366
Garbisu C, Alkorta I (1999) Utilization of genetically engineered microorganisms (GEMs) for bioremediation. J Chem Technol Biotechnol 74:599–606
Garbisu C, Alkorta I (2001) Phytoextraction: a cost-effective plant-based technology for the removal of metals from the environment. Biores Technol 77:229–236
Garbisu C, Alkorta I (2003) Basic concepts on heavy metal soil bioremediation. Eur J Min Proc Environ Protect 3:58–66
Garbisu C, Hernández-Allica J, Barrutia O, Alkorta I, Becerril JM (2002) Phytoremediation: a technology using green plants to remove contaminants from polluted areas. Rev Environ Health 17:173–188
Gómez E, Ferreras L, Toresani S (2006) Soil bacterial functional diversity as influenced by organic amendment application. Biores Technol 97:1484–1489
Grayston SJ, Vaughan D, Jones D (1997) Rhizosphere carbon flow in trees, in comparison with annual plants: the importance of root exudation and its impact on microbial activity and nutrient availability. Appl Soil Ecol 5:29–56
Grčman H, Vodnik D, Velikonja-Bolta S, Leštan D (2003) Ethylenediaminedisuccinate as a new chelate for environmentally safe enhanced lead phytoextraction. J Environ Qual 32:500–506
Gremion F, Chatzinotas A, Kaufmann K, Von Sigler W, Harms H (2004) Impacts of heavy-metal contamination and phytoremediation on a microbial community during a 12-month microcosm experiment. FEMS Microbiol Ecol 48:273–283
Hernández-Allica J, Becerril JM, Zárate O, Garbisu C (2006a) Assessment of the efficiency of a metal phytoextraction process with biological indicators of soil health. Plant Soil 281:147–158
Hernández-Allica J, Garbisu C, Becerril JM, Barrutia O, García-Plazaola JI, Zhao FJ, McGrath SP (2006b) Synthesis of low molecular weight thiols in response to Cd exposure in Thlaspi caerulescens. Plant Cell Environ 29:1422–1429
Hernández-Allica J, Becerril JM, Garbisu C (2008) Assessment of the phytoextraction potential of high biomass crop plants. Environ Pollut 152:32–40
Hernández-Allica J, Garbisu C, Barrutia O, Becerril JM (2007) EDTA-induced heavy metal accumulation and phytotoxicity in cardoon plants. Environ Exp Bot 60:26–32
Hildén M, Rapport DJ (1993) Four centuries of cumulative impacts on a Finnish river and its estuary: an ecosystem health-approach. J Aquat Ecosyst Health 2:261–275
Huang PM, Adriano DC, Logan TJ, Checkai RT (1998) Preface. In: Huang PM, Adriano DC, Logan TJ, Checkai RT (eds) Soil chemistry and ecosystem health. Soil Science Society of America, Madison WI, p viii
Janke RR, Papendick RI (1994) Preface. In: Doran JW, Coleman DC, Bezdiceck DF, Stewart BA (eds) Defining soil quality for a sustainable environment. SSSA Special Publication 35, Soil Science Society of America, Madison WI, pp ix–xi
Jaworska JS, Schowanek D, Feijtel TCJ (1999) Environmental risk assessment for trisodium [S,S]-ethylene diamine disuccinate, a biodegradable chelator used in detergent applications. Chemosphere 38:3597–3625
Jones PW, Williams DR (2001) Chemical speciation used to assess [S,S’]-ethylenediaminedisuccinic acid (EDDS) as a readily-biodegradable replacement for EDTA in radiochemical decontamination formulations. Appl Radiat Isot 54:587–593
Kandeler E (2007) Physiological and biochemical methods for studying soil biota and their function. In: Eldor AP (ed) Soil microbiology, ecology and biochemistry. Academic, Oxford, pp 53–80
Keller C, Hammer D (2004) Metal availability and soil toxicity after repeated croppings of Thlaspi caerulescens in metal contaminated soils. Environ Pollut 131:243–254
Kirkham MB (1977) Organic matter and heavy metal uptake. Compost Sci 18:18–21
Knox AS, Seaman J, Adriano DC, Pierzynski G (2000) Chemophytostabilization of metals in contaminated soils. In: Wise DL, Trantolo DJ, Cichon EJ, Inyang HI, Stottmeister U (eds) Bioremediation of contaminated soils. Marcel Dekker, New York, pp 811–836
Larson JL, Zak DR, Sinsabaugh RL (2002) Extracellular enzyme activity beneath temperate trees growing under elevated carbon dioxide and ozone. Soil Sci Soc Am J 66:1848–1856
Loreau M (2000) Biodiversity and ecosystem functioning: recent theoretical advances. Oikos 91:3–17
Luo Y, Zhou X (2006) Preface. In: Luo Y, Zhou X (eds) Soil respiration and the environment. Academic, Oxford, pp ix–x
Mageau MT, Constanza R, Ulanowicz RE (1995) The development and initial testing of a quantitative assessment of ecosystem health. Ecosyst Health 1:201–213
Malik S, Beer M, Megharaj M, Naidu R (2008) The use of molecular techniques to characterize the microbial communities in contaminated soil and water. Environ Int 34:265–276
McGrath SP (1987) Long-term studies of metal transfers following applications of sewage sludge. In: Coughtrey PJ, Martin MH, Unsworth MH (eds) Pollutant transport and fate in ecosystems. Special Publication No. 6 of the British Ecological Society, Blackwell Scientific, Oxford, pp 301–317
McGrath SP, Zhao FJ, Lombi E (2002) Phytoremediation of metals, metalloids, and radionuclides. Adv Agron 75:1–56
Meagher RB (2000) Phytoremediation of toxic elemental and organic pollutants. Curr Opin Plant Biol 3:153–162
Mijangos I, Pérez R, Albizu I, Garbisu C (2006) Effects of fertilization and tillage on soil biological parameters. Enzyme Microb Technol 40:100–106
Nannipieri P, Kandeler E, Ruggiero P (2002) Enzyme activities and microbiological and biochemical processes in soil. In: Burns RG, Dick RP (eds) Enzymes in the environment. Marcel Dekker, New York, pp 1–33
Odum EP (1981) The effects of stress on the trajectory of ecological succession. In: Barrett GW, Rosenberg R (eds) Stress effects on natural ecosystems.Wiley, Chichester, pp 43–47
Pankhurst CE, Doube BM, Gupta VVSR (1997) Biological indicators of soil health: synthesis. In: Pankhurst CE, Doube BM, Gupta VVSR (eds) Biological indicators of soil health. CAB International, Wallingford, pp 419–435
Pearce F (2003) Arsenic´s fatal legacy grows. New Sci 179:4–5
Pilon-Smits E (2005) Phytoremediation. Annu Rev Plant Biol 56:15–39
Preston-Mafham J, Boddy L, Randerson PF (2002) Analysis of microbial community functional diversity using sole-carbon-source utilisation profiles – a critique. FEMS Microbiol Ecol 42:1–14
Rapport D (1998) Defining ecosystem health. In: Rapport D, Costanza R, Epstein PR, Gaudet C, Levins R (eds) Ecosystem health. Blackwell Science, Oxford, pp 18–33
Rapport DJ, McCUllum J, Miller MH (1997) Soil health: its relation to ecosystem health. In: Pankhurst CE, Doube BM, Gupta VVSR (eds) Biological indicators of soil health. CAB International, Wallingford, pp 29–47
Raskin I, Kumar PBAN, Dushenkov S, Salt DE (1994) Bioconcentration of heavy metals by plants. Curr Opin Biotechnol 5: 285–290
Raskin I, Smith RD, Salt DE (1997) Phytoremediation of metals: using plants to remove pollutants from the environment. Curr Opin Biotechnol 8:221–226
Reichle DE (1997) The role of soil invertebrates in nutrient cycling. In: Lohm V, Persson T (eds) Soil organisms as components of ecosystems. Swedish Natural Science Research Council, Stockholm, pp 145–156
Robinson B, Fernández JE, Madejón P, Marañón T, Murillo JM, Green S, Clothier B (2003) Phytoextraction: an assessment of biogeochemical and economic viability. Plant Soil 249:117–125
Römkens P, Bouwman L, Japenga J, Draaisma C (2002) Potentials and drawbacks of chelate-induced phytoremediation of soils. Environ Poll 116:109–121
Rozas MA, Alkorta I, Garbisu C (2006) Phytoextraction and phytofiltration of arsenic. Rev Environ Health 21:43–56
Salt DE, Blaylock M, Kumar NPBA, Dushenkov V, Ensley BD, Chet I, Raskin I (1995) Phytoremediation: a novel strategy for removal of toxic metals from the environment using plants. Biotechnol 13:468–474
Salt DE, Smith RD, Raskin I (1998) Phytoremediation. Annu Rev Plant Physiol 49:643–668
Santos FS, Hernández-Allica J, Becerril JM, Amaral-Sobrinho N, Mazur N, Garbisu C (2006) Chelate-induced phytoextraction of metal polluted soils with Brachiaria decumbens. Chemosphere 65:43–50
Stevenson FJ, Ardakani MS (1972) Organic matter reactions involving micronutrients in soils. In: Mortvedt JJ, Giordano PM, Lindsay WL (eds) Micronutrients in agriculture. SSSA, Madison WI, pp 79–114
Tate RL (1995) Soil microbiology. Wiley, New York
Torsvik V, Øvreås L (2007) Microbial phylogeny and diversity in soil. In: Van Elsas JD, Jansson JK, Trevors JT (eds) Modern soil microbiology, 2nd ed. CRC Press, Boca Raton, pp 23–54
Toyota K, Kuninaga S (2006) Comparison of soil microbial community between soils amended with or without farmyard manure. Appl Soil Ecol 33:39–48
Wang AS, Angle JS, Chaney RL, Delorme TA, McIntosh M (2006) Changes in soil biological activities under reduced soil pH during Thlaspi caerulescens phytoextraction. Soil Biol Biochem 38:1451–1461
Welp G, Brümmer GW (1997) Microbial toxicity of Cd and Hg in different soils related to total and water-soluble contents. Ecotoxicol Environ Saf 38:200–204
Wenzel WW, Salt D, Smith R, Adriano DC (1999) Phytoremediation: a plant–microbe-based remediation system. In: Adriano DC, Bollag JM, Frankenberger W, Sims R (eds) Bioremediation of contaminated soils. SSSA Special Monograph 37, Madison WI, pp 457–510
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2009 Springer-Verlag Berlin Heidelberg
About this chapter
Cite this chapter
Epelde, L., Ma Becerril, J., Alkorta, I., Garbisu, C. (2009). Heavy Metal Phytoremediation: Microbial Indicators of Soil Health for the Assessment of Remediation Efficiency. In: Singh, A., Kuhad, R., Ward, O. (eds) Advances in Applied Bioremediation. Soil Biology, vol 17. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-540-89621-0_16
Download citation
DOI: https://doi.org/10.1007/978-3-540-89621-0_16
Published:
Publisher Name: Springer, Berlin, Heidelberg
Print ISBN: 978-3-540-89620-3
Online ISBN: 978-3-540-89621-0
eBook Packages: Chemistry and Materials ScienceChemistry and Material Science (R0)