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Genomic Analysis of the Pathogenicity Factors from E. coli Strain O157:H7 and EHEC Strain O104:H4

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Abstract

This guided exercise will show you how to use BLAST to compare two genomes. The objective is to find open reading frames (ORFs) that are unique to one genome. This exercise uses a local installation of BLAST+, AWK, MySQL, and R.

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Correspondence to Röbbe Wünschiers .

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© 2013 Springer-Verlag Berlin Heidelberg

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Wünschiers, R. (2013). Genomic Analysis of the Pathogenicity Factors from E. coli Strain O157:H7 and EHEC Strain O104:H4. In: Computational Biology. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-34749-8_18

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