Abstract
The edaphon comprises all organisms living in the soil. Based on the body diameter of the organisms, the edaphon is divided into the classifications microflora , microfauna , mesofauna and macrofauna . The body width of soil organisms largely determines their microhabitats (Fig. 4.1). Microflora (bacteria, archaea, fungi, algae) and microfauna (protozoa, nematodes) form the community of microorganisms in soils. Soil organisms influence soil formation (pedogenesis) directly (e.g. through burrowing activity and decomposition of organic matter) and indirectly (e.g. by feeding on plant roots). Soil microorganisms and soil fauna whose life cycle stages all take place in the soil, belong to the permanent soil organisms . Temporary soil fauna spend only part of their life cycle in the soil (e.g. insect larvae), while periodical fauna often leave the soil and then return. Alternating soil fauna alternate between aboveground and underground generations (Fig. 4.2). However, permanent soil organisms can also be spread through the atmosphere in resistant dormant forms (cysts, spores), or sorbed onto dust particles. Active or passive transport of soil organisms within the soil profile can take place as well.
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Blume H-P, Felix-Henningsen P, Fischer WR, Frede H-G, Horn R, Stahr K (1995) Handbuch der Bodenkunde. Wiley-VCH, Weinheim
Domsch KH, Gams W, Anderson TH (1980) Compendium of soil fungi, vol 1(2). Academic Press, London
Dunger W, Fiedler HJ (1997) Methoden der Bodenbiologie, vol 2. Aufl. Fischer, Stuttgart
Eisenbeis G, Wirchard W (1985) Atlas zur Biologie der Bodenarthropoden. Fischer, Stuttgart
Foissner W (1994) Die Urtiere (Protozoen) des Bodens. Kataloge des Oberösterreichischen Landesmuseums N. F. 71, 169–218
Garrity GM (eds) (2005) Bergey’s manual of systematic bacteriology. Springer, Berlin
Haider K, Schäffer A (2000) Umwandlung und Abbau von Pflanzenschutzmitteln in Böden—Auswirkungen auf die Umwelt. Enke im Georg Thieme Verlag, Stuttgart
Humbert S, Tarnawski S, Fromin N, Mallet M-P, Aragno M, Zopfi J (2010) Molecular detection of anammox bacteria in terrestrial ecosystems: distribution and diversity. ISME J 4:450–454
Kandeler E, Dick RP (2006) Distribution and function of soil enzymes in agroecosystems. In: Benckiser G, Schnell S (eds) Biodiversity in agricultural production systems. Taylor & Francis, Boca Raton, pp 263–285
Leiniger S, Urich T, Schloter M, Schwark L, Qi J, Nicol GW, Prosser JI, Schuster SC, Schleper C (2006) Archaea predominate among ammonia-oxidizing prokaryotes in soils. Nature 442:806–809
Madigan MT, Martinko JM (2006) Brock Mikrobiologie, 11th edn. Pearson Studium, München
Schmidt I, Sliekers O, Schmid M, Cirpus I, Strous M, Bock E, Kuenen JC, Jetten MSM (2002) Aerobic and anaerobic ammonia oxidizing bacteria competitors or natural partners?—FEMS Microbiol Ecol 39:175–181
Storch V, Welsch U (2004) Systematische Zoologie. Spektrum Akademischer Verlag, 6th edn. Heidelberg
Topp W (1981) Biologie der Bodenorganismen. UTB, Quelle und Mayer, Heidelberg
Walter R (2000) Umweltvirologie—Viren in Wasser und Böden. Springer, New York
Weinbauer MG (2004) Ecology of prokaryotic viruses. FEMS Microbiol Rev 28:127–181
Cited References
Brimecombe MJ, De Leij FAMM, Lynch JM (2007) Rhizodeposition and microbial populations. In: Pinton R, Varanini Z, Nannipieri P (eds) The rhizosphere—biochemistry and organic substances at the soil plant interface. 2nd edn. CRC Press, Taylor & Francis Group, Boca Raton
Clarholm M (1981) Protozoan grazing in soil—impact and importance. Microb Ecol 7:343–350
Coleman DC, Crossley DA Jr (1996) Fundamentals in soil ecology. Academic Press, San Diego
Dunger W (1983) Tiere im Boden, vol 3. Aufl. Ziemsen, Wittenberg
Eisenback JD, Zunke U (eds) (2000) Nemapix. A journal of nematological images. 2nd edn, vol 1. 3510 Indian Drive, Blacksburg v.a. 24060
Fritsche W (1998) Umweltmikrobiologie. Gustav Fischer, Jena, Stuttgart
Fuchs G, Schlegel HG (eds) (2007) Allgemeine Mikrobiologie, 8th edn. Thieme, Stuttgart
Gisi U, Schenker R, Schulin R, Stadelmann FH, Sticher H (1997) Bodenökologie, vol 2. Aufl. Thieme, Stuttgart
Kandeler E, Stemmer M, Klimanek EM (1999a) Response of soil microbial biomass, urease and xylanase within particle size fractions to long-term soil management. Soil Biol Biochem 31:261–273
Kandeler E, Palli S, Stemmer M, Gerzabek MH (1999b) Tillage changes microbial biomass and enzyme activities in particle-size fractions of a Haplic Chernozem. Soil Biol Biochem 31:1253–1264
Kandeler E, Mosier A, Morgan J, Milchunas D, King J, Rudolph S, Tscherko D (2006) Response of soil microbial biomass and enzyme activities to transient elevation of carbon dioxide in a semi-arid grassland. Soil Biol Biochem 38:2448–2460
Kirchmann H, Haberhauer G, Kandeler E, Sessitsch A, Gerzabek MH (2004) Level and quality of organic matter input regulates biogeochemistry of soils—synthesis of a long-term agricultural field study. Glob Biogeochem Cycles 18 GB4011. doi:10.1029/2003GB002204,2004
Maier RM, Pepper IL, Gerba CP (2000) Environmental microbiology. Academic Press, San Diego
Paul EA (eds) (2015): Soil microbiology, ecology, and biochemistry, 4th edn. Academic Press, Massachusetts
Philippot L, Hallin S, Schloter M (2007) Ecology of denitrifying prokaryotes in agricultural soil. Adv Agron 96:249–305
Raubuch M, Joergensen RG (2002) C and net N mineralisation in a coniferous forest soil: the contribution of the temporal variability of microbial C and N. Soil Biol Biochem 34:841–849
Ruess L, Schutz K, Haubert D, Haggblom MM, Kandeler E, Scheu S (2005) Application of lipid analysis to understand trophic interactions in soil. Ecology 86:2075–2082
Stahr K, Kandeler E, Hermann L, Streck T (2012) Bodenkunde und Standortlehre—Grundwissen Bachelor, 2nd edn. Ulmer UTB, Stuttgart
Van Elsas JD, Jansson JK, Trevors JT (2006) Modern soil microbiology, 2nd edn. CRC Press, Taylor & Francis Group, Boca Raton
Weaver RW et al (eds) (1994) Methods of soil analysis, part 2: microbiological and biochemical properties. SSSA, Madison
Wood M (1995) Environmental soil biology. Blackie Academic & Professional, Glasgow
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Blume, HP. et al. (2016). Soil Organisms and Their Habitat. In: Scheffer/SchachtschabelSoil Science. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-30942-7_4
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