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Microbiological and Biochemical Indicators for Assessing Soil Quality in Drylands from Patagonia

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Biology and Biotechnology of Patagonian Microorganisms

Abstract

Soil monitoring programs aimed to diagnose the state of the soils and to prevent their deterioration are needed to make use of this resource in a sustainable manner. The development of such programs requires the identification of indicators that can be used to detect changes in soil quality. Although several chemical, physical, and biological parameters serve this purpose, microbiological properties have the advantages of being highly sensitive and responding quickly to changes in soil quality. In Argentina, the information of soil quality indicators is fragmented and mainly directed toward the analysis of physicochemical parameters in agricultural lands. In this chapter, we review microbiological/biochemical indicators of soil quality measured in water-limited natural ecosystems of Patagonia. This baseline information contributes to the future design of site-specific monitoring programs devoted to prevent the deterioration of lands in Patagonia.

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References

  • Abbott LK, Murphy DV (2007) What is soil biological fertility? In: Abbott LK, Murphy DV (eds) Soil biological fertility: a key to sustainable land use in agriculture. Springer, Dordrecht, pp 1–15

    Google Scholar 

  • Acuña AJ, Pucci OH, Pucci GN (2012) Effect of nitrogen deficiency in the biodegradation of aliphatic and aromatic hydrocarbons in Patagonian contaminated soil. Int J Res Rev Appl Sci 11:470–476

    Google Scholar 

  • Ares J, Beeskow AM, Bertiller M, Rostagno M, Irisarri M, Anchorena J, Defossé G, Merino C (1990) Structural and dynamic characteristics of overgrazed lands of northern Patagonia, Argentina. In: Breymeyer A (ed) Managed grasslands. Elsevier, Amsterdam, pp 149–175

    Google Scholar 

  • Austin AT, Vivanco L (2006) Plant litter decomposition in a semi-arid ecosystem controlled by photodegradation. Nature (Lond) 442:555–558

    Article  CAS  Google Scholar 

  • Austin AT, Sala OE, Jackson RB (2006) Inhibition of nitrification alters carbon turnover in the Patagonian Steppe. Ecosystems 9:1257–1265

    Article  CAS  Google Scholar 

  • Bastida F, Moreno JL, Hernández T, García C (2006) Microbiological degradation index of soils in a semiarid climate. Soil Biol Biochem 38:3463–3473

    Article  CAS  Google Scholar 

  • Bastida F, Zsolnay A, Hernández T, García C (2008) Past, present and future of soil quality indices: a biological perspective. Geoderma 147:159–171

    Article  CAS  Google Scholar 

  • Benedetti A, Dilly O (2006) Introduction. In: Bloem J, Hopkins DW, Benedetti A (eds) Microbiological methods for assessing soil quality. CABI Publishing, Wallingford, pp 3–14

    Google Scholar 

  • Bertiller MB, Bisigato A (1998) Vegetation dynamics under grazing disturbance. The state-and-transition model for the Patagonian steppes. Ecol Austr 8:191–199

    Google Scholar 

  • Bertiller MB, Ares JO, Bisigato AJ (2002) Multiscale indicators of land degradation in the Patagonian Monte, Argentina. Environ Manag 30:704–715

    Article  Google Scholar 

  • Bertiller MB, Mazzarino MJ, Carrera AL, Diehl P, Satti P, Gobbi M, Sain CL (2006) Leaf strategies and soil N across a regional humidity gradient in Patagonia. Oecologia 148:612–624

    Google Scholar 

  • Blecker SW, Stillings LL, Amacher MC, Ippolito JA, DeCrappeo NM (2013) Development and application of a soil organic matter-based soil quality index in mineralized terrane of the Western US. Environ Earth Sci 68:1887–1901

    Article  CAS  Google Scholar 

  • Bloem J, Schouten AJ, Sørensen SJ, Rutgers M, van der Werf A, Breure AM (2006) Monitoring and evaluating soil quality. In: Bloem J, Hopkins DW, Benedetti A (eds) Microbiological methods for assessing soil quality. CABI Publishing, Wallingford, pp 23–49

    Google Scholar 

  • Burns RG, Nannipieri P, Benedetti A, Hopkins DW (2006) Defining soil quality. In: Bloem J, Hopkins DW, Benedetti A (eds) Microbiological methods for assessing soil quality. CABI Publishing, Wallingford, pp 15–22

    Google Scholar 

  • Carrera AL, Bertiller MB (2013) Combined effects of leaf litter and soil microsite on decomposition process in arid rangelands. J Environ Manag 114:505–511

    Article  CAS  Google Scholar 

  • Carrera AL, Bertiller MB, Sain CL, Mazzarino MJ (2003) Relationship between plant nitrogen conservation strategies and the dynamics of soil nitrogen in the arid Patagonian Monte, Argentina. Plant Soil 255:595–604

    Article  CAS  Google Scholar 

  • Carrera AL, Vargas DN, Campanella MV, Bertiller MB, Sain CL, Mazzarino MJ (2005) Soil nitrogen in relation to quality and decomposability of plant litter in the Patagonian Monte, Argentina. Plant Ecol 181:139–151

    Article  Google Scholar 

  • Chartier MP, Rostagno CM, Videla LS (2013) Selective erosion of clay, organic carbon and total nitrogen in grazed semiarid rangelands of northeastern Patagonia, Argentina. J Arid Environ 88:43–49

    Article  Google Scholar 

  • Coronato AMJ, Coronato F, Mazzoni E, Vázquez M (2008) The physical geography of Patagonia and Tierra del Fuego. In: Rabassa J (ed) The late Cenozoic of Patagonia and Tierra del Fuego, vol 11. Elsevier, Amsterdam, pp 13–55

    Chapter  Google Scholar 

  • del Valle HF (1998) Patagonian soils: a regional synthesis. Ecol Austr 8:103–123

    Google Scholar 

  • Doran JW, Zeiss MR (2000) Soil health and sustainability: managing the biotic component of soil quality. Appl Soil Ecol 15:3–11

    Article  Google Scholar 

  • Eivazi F, Tabatabai MA (1988) Glucosidases and galactosidases in soils. Soil Biol Biochem 20:601–606

    Article  CAS  Google Scholar 

  • Flombaum P, Sala OE (2012) Effects of plant species traits on ecosystem processes: experiments in the Patagonian steppe. Ecology 93:227–234

    Article  PubMed  Google Scholar 

  • García-Ruiz R, Ochoa V, Hinojosa MB, Carreira JA (2008) Suitability of enzyme activities for the monitoring of soil quality improvement in organic agricultural systems. Soil Biol Biochem 40:2137–2145

    Article  Google Scholar 

  • Gil-Sotres F, Trasar-Cepeda C, Leirós MC, Seoane S (2005) Different approaches to evaluating soil quality using biochemical properties. Soil Biol Biochem 37:877–887

    Article  CAS  Google Scholar 

  • González Polo M, Kowaljow E, Castán E, Sauzet O, Mazzarino MJ (2015) Persistent effect of organic matter pulse on a sandy soil of semiarid Patagonia. Biol Fertil Soils 51:241–249

    Article  Google Scholar 

  • Gonzalez-Polo M, Austin AT (2009) Spatial heterogeneity provides organic matter refuges for soil microbial activity in the Patagonian steppe, Argentina. Soil Biol Biochem 41:1348–1351

    Article  CAS  Google Scholar 

  • Hedo J, Lucas-Borja ME, Wic C, Andrés-Abellán M, de Las Heras J (2015) Soil microbiological properties and enzymatic activities of long-term post-fire recovery in dry and semiarid Aleppo pine (Pinus halepensis M.) forest stands. Solid Earth 6:243–252

    Article  Google Scholar 

  • Hinojosa MB, García-Ruíz R, Viñegla B, Carreira JA (2004) Microbiological rates and enzyme activities as indicators of functionality in soils affected by the Aznalcóllar toxic spill. Soil Biol Biochem 36:1637–1644

    Article  CAS  Google Scholar 

  • Karlen DL, Mausbach MJ, Doran JW, Cline RG, Harris RF, Schuman GE (1997) Soil quality: a concept, definition, and framework for evaluation (a guest editorial). Soil Sci Soc Am J 61:4–10

    Article  CAS  Google Scholar 

  • Karlen DL, Andrews SS, Doran JW (2001) Soil quality: current concepts and applications. Adv Agron 74:1–40

    Article  CAS  Google Scholar 

  • Kellner K, Risoli C, Metz M (2011) Terminal evaluation of the UNEP/FAO/GEF project ‘Land Degradation Assessment in Drylands (LADA)’. United Nations Environment Programme

    Google Scholar 

  • Kleinsteuber S, Riis V, Fetzer I, Harms H, Müller S (2006) Population dynamics within a microbial consortium during growth on diesel fuel in saline environments. Appl Environ Microbiol 72:3531–3542

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Kowaljow E, Mazzarino MJ (2007) Soil restoration in semiarid Patagonia: chemical and biological response to different compost quality. Soil Biol Biochem 39:1580–1588

    Article  CAS  Google Scholar 

  • Kowaljow E, Mazzarino MJ, Satti P, Jiménez-Rodríguez C (2010) Organic and inorganic fertilizer effects on a degraded Patagonian rangeland. Plant Soil 332:135–145

    Article  CAS  Google Scholar 

  • Lehman RM, Acosta-Martinez V, Buyer JS, Cambardella CA, Collins HP, Ducey TF, Halvorson JJ, Jin VL, Johnson JMF, Kremer RJ, Lundgren JG, Manter DK, Maul JE, Smith JL, Stott DE (2015) Soil biology for resilient, healthy soil. J Soil Water Conserv 70:12A–18A

    Article  Google Scholar 

  • León RJC, Bran D, Collantes M, Paruelo JM, Soriano A (1998) Grandes unidades de vegetación de la Patagonia extra andina. Ecol Austr 8:125–144

    Google Scholar 

  • Marcos MS, Bertiller MB, Saraví Cisneros H, Olivera NL (2016) Nitrification and ammonia-oxidizing bacteria shift in response to soil moisture and plant litter quality in arid soils from the Patagonian Monte. Pedobiol J Soil Ecol 59:1–10

    Article  Google Scholar 

  • Mazzarino MJ, Bertiller MB, Sain CL, Laos F, Coronato FR (1996) Spatial patterns of nitrogen availability, mineralization, and immobilization in northern Patagonia, Argentina. Arid Soil Res Rehabil 10:295–309

    Article  CAS  Google Scholar 

  • Mazzarino MJ, Bertiller MB, Sain C, Satti P, Coronato F (1998) Soil nitrogen dynamics in northeastern Patagonia steppe under different precipitation regimes. Plant Soil 202:125–131

    Article  CAS  Google Scholar 

  • Mazzoni E, Vázquez M (2010) Desertificación en la Patagonia. In: Latrubesse EM (ed) Developments in Earth surface processes. Elsevier, Amsterdam, pp 351–377

    Google Scholar 

  • Mitton FM, Miglioranza KSB, Gonzalez M, Shimabukuro VM, Monserrat JM (2014) Assessment of tolerance and efficiency of crop species in the phytoremediation of DDT polluted soils. Ecol Eng 71:501–508

    Article  Google Scholar 

  • Niemeijer D, Puigdefabregas J, White R, Lal R, Winslow M, Ziedler J, Prince S, Archer E, King C (2005) Dryland systems. UNEP, London, pp 623–662

    Google Scholar 

  • Olivera NL, Prieto L, Carrera AL, Saraví Cisneros H, Bertiller MB (2014) Do soil enzymes respond to long-term grazing in an arid ecosystem? Plant Soil 378:35–48

    Article  CAS  Google Scholar 

  • Olivera NL, Prieto L, Bertiller MB, Ferrero MA (2016) Sheep grazing and soil bacterial diversity in shrublands of the Patagonian Monte, Argentina. J Arid Environ 125:16–20

    Article  Google Scholar 

  • Paruelo JM, Golluscio RA, Jobbágy EG, Canevari M, Aguiar MR (2006) Situación ambiental en la Estepa Patagónica. In: Brown A, Martinez Ortiz U, Acerbi M, Corcuera J (eds) La situación ambiental Argentina 2005. Fundación Vida Silvestre Argentina, Buenos Aires, pp 303–313

    Google Scholar 

  • Paz-Ferreiro J, Fu S (2016) Biological indices for soil quality evaluation: perspectives and limitations. Land Degrad Dev 27:14–25

    Article  Google Scholar 

  • Peressutti SR, Alvarez HM, Pucci OH (2003) Dynamics of hydrocarbon-degrading bacteriocenosis of an experimental oil pollution in Patagonian soil. Int Biodeter Biodegr 52:21–30

    Article  CAS  Google Scholar 

  • Peri PL, Bahamonde H, Christiansen R (2015) Soil respiration in Patagonian semiarid grasslands under contrasting environmental and use conditions. J Arid Environ 119:1–8

    Article  Google Scholar 

  • Prieto LH, Bertiller MB, Carrera AL, Olivera NL (2011) Soil enzyme and microbial activities in a grazing ecosystem of Patagonian Monte, Argentina. Geoderma 162:281–287

    Article  CAS  Google Scholar 

  • Pucci OH, Bak MA, Peressutti SR, Klein I, Härtig C, Alvarez HM, Wünsche L (2000) Influence of crude oil contamination on the bacterial community of semiarid soils of Patagonia (Argentina). Acta Biotechnol 20:129–146

    Article  CAS  Google Scholar 

  • Raiesi F, Beheshti A (2014) Soil C turnover, microbial biomass and respiration, and enzymatic activities following rangeland conversion to wheat-alfalfa cropping in a semi-arid climate. Environ Earth Sci 72:5073–5088

    Article  CAS  Google Scholar 

  • Schloter M, Munch JC, Tittarelli F (2006) Managing soil quality. In: Bloem J, Hopkins DW, Benedetti A (eds) Microbiological methods for assessing soil quality. CABI Publishing, Wallingford, pp 50–62

    Google Scholar 

  • Shen SM, Pruden G, Jenkinson DS (1984) Mineralization and immobilization of nitrogen in fumigated soil and the measurement of microbial biomass nitrogen. Soil Biol Biochem 16:437–444

    Article  CAS  Google Scholar 

  • Tabatabai MG (1982) Soil enzymes. In: ASA-SSSA (ed) Methods of soil analysis. Part 2. Microbiological and biochemical properties. ASA-SSSA, Madison, WI, pp 903–947

    Google Scholar 

  • United Nations (2014) Resolution A/RES/68/232

    Google Scholar 

  • van Bruggen AHC, Semenov AM (2000) In search of biological indicators for soil health and disease suppression. Appl Soil Ecol 15:13–24

    Article  Google Scholar 

  • Vargas DN, Bertiller MB, Ares JO, Carrera AL, Sain CL (2006) Soil C and N dynamics induced by leaf-litter decomposition of shrubs and perennial grasses of the Patagonian Monte. Soil Biol Biochem 38:2401–2410

    Article  CAS  Google Scholar 

  • Voroney RP (2007) The soil habitat. In: Paul EA (ed) Soil microbiology, ecology and biochemistry. Elsevier, Amsterdam, pp 25–49

    Chapter  Google Scholar 

  • Wall DH (2012) Introduction. In: Wall DH (ed) Soil ecology and ecosystem services. Oxford University Press, Oxford, pp 1–2

    Chapter  Google Scholar 

  • Yahdjian L, Sala OE (2008) Do litter decomposition and nitrogen mineralization show the same trend in the response to dry and wet years in the Patagonian steppe? J Arid Environ 72:687–695

    Article  Google Scholar 

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Acknowledgments

The authors gratefully acknowledge support from ANPCyT (PICT 2013-1505), Argentina .

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Correspondence to Magalí S. Marcos .

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Marcos, M.S., Olivera, N.L. (2016). Microbiological and Biochemical Indicators for Assessing Soil Quality in Drylands from Patagonia. In: Olivera, N., Libkind, D., Donati, E. (eds) Biology and Biotechnology of Patagonian Microorganisms. Springer, Cham. https://doi.org/10.1007/978-3-319-42801-7_6

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