Skip to main content

The Alternating Least-Squares Algorithm for CDPCA

  • Conference paper
  • First Online:
Optimization in the Natural Sciences (EmC-ONS 2014)

Part of the book series: Communications in Computer and Information Science ((CCIS,volume 499))

Included in the following conference series:

Abstract

Clustering and Disjoint Principal Component Analysis (CDPCA) is a constrained principal component analysis recently proposed for clustering of objects and partitioning of variables, simultaneously, which we have implemented in R language. In this paper, we deal in detail with the alternating least-squares algorithm for CDPCA and highlight its algebraic features for constructing both interpretable principal components and clusters of objects. Two applications are given to illustrate the capabilities of this new methodology.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 39.99
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 54.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. dā€™Aspremont, A., El Ghaoui, L., Jordan, M.I., Lanckriet, G.R.G.: A direct formulation for sparse PCA using semidefinite programming. SIAM 49(3), 434ā€“448 (2007)

    ArticleĀ  MATHĀ  MathSciNetĀ  Google ScholarĀ 

  2. Jolliffe, I.T.: Principal Component Analysis, 2nd edn. Springer, New York (2002)

    MATHĀ  Google ScholarĀ 

  3. Jolliffe, I.T., Trendafilov, N.T., Uddin, M.: A modified principal component technique based on the lasso. J. Comput. Graph. Stat. 12(3), 531ā€“547 (2003)

    ArticleĀ  MathSciNetĀ  Google ScholarĀ 

  4. Ma, Z.: Sparse principal component analysis and iterative thresholding. Ann. Stat. 41(2), 772ā€“801 (2013)

    ArticleĀ  MATHĀ  Google ScholarĀ 

  5. Macedo, E., Freitas, A.: Statistical methods and optimization in data mining. In: III International Conference of Optimization and Applications, OPTIMA 2012, pp. 164ā€“169 (2012)

    Google ScholarĀ 

  6. R Development Core Team: R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing. http://www.R-project.org/

  7. UCI Repository: Winsconsin Breast Cancer Data Set. http://archive.ics.uci.edu/ml/datasets/Breast+Cancer+Wisconsin+(Original)

  8. Vichi, M., Saporta, G.: Clustering and disjoint principal component analysis. Comput. Stat. Data Anal. 53, 3194ā€“3208 (2009)

    ArticleĀ  MATHĀ  MathSciNetĀ  Google ScholarĀ 

  9. Vines, S.: Simple principal components. Appl. Stat. 49, 441ā€“451 (2000)

    MATHĀ  MathSciNetĀ  Google ScholarĀ 

  10. Xu, R., Wunsch, D.: Survey of clustering algorithms. IEEE Trans. Neural Netw. 16, 645ā€“648 (2005)

    ArticleĀ  Google ScholarĀ 

  11. Zou, H., Hastie, T., Tibshirani, R.: Sparse principal component analysis. J. Comput. Graph. Stat. 15(2), 262ā€“286 (2006)

    ArticleĀ  MathSciNetĀ  Google ScholarĀ 

Download references

Acknowledgments

The authors would like to thank the anonymous referee for all the valuable and constructive comments which have helped to improve this paper. A special thanks to Professor Maurizio Vichi for providing us a Matlab version of the ALS algorithm for performing CDPCA. This work was partially supported by Portuguese funds through the CIDMA - Center for Research and Development in Mathematics and Applications, and the Portuguese Foundation for Science and Technology (FCT ā€“ FundaĆ§Ć£o para a CiĆŖncia e a Tecnologia), within project UID/MAT/04106/2013.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to EloĆ­sa Macedo .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

Ā© 2015 Springer International Publishing Switzerland

About this paper

Cite this paper

Macedo, E., Freitas, A. (2015). The Alternating Least-Squares Algorithm for CDPCA. In: Plakhov, A., Tchemisova, T., Freitas, A. (eds) Optimization in the Natural Sciences. EmC-ONS 2014. Communications in Computer and Information Science, vol 499. Springer, Cham. https://doi.org/10.1007/978-3-319-20352-2_12

Download citation

  • DOI: https://doi.org/10.1007/978-3-319-20352-2_12

  • Published:

  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-20351-5

  • Online ISBN: 978-3-319-20352-2

  • eBook Packages: Computer ScienceComputer Science (R0)

Publish with us

Policies and ethics