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PCNA Structure and Interactions with Partner Proteins

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Molecular Life Sciences

Synopsis

Proliferating cell nuclear antigen (PCNA) consists of three identical monomers that topologically encircle double-stranded DNA. PCNA stimulates the processivity of DNA polymerase δ and, to a less extent, the intrinsically highly processive DNA polymerase ε. It also functions as a platform that recruits and coordinates the activities of a large number of DNA processing proteins. Emerging structural and biochemical studies suggest that the nature of PCNA-partner proteins interactions is complex. A hydrophobic groove at the front side of PCNA serves as a primary docking site for the consensus PIP box motifs present in many PCNA-binding partners. Sequences that immediately flank the PIP box motif or regions that are distant from it could also interact with the hydrophobic groove and other regions of PCNA. Posttranslational modifications on the backside of PCNA could add another dimension to its interaction with partner proteins. An encounter of PCNA with different DNA structures...

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References

  • Dieckman LM, Freudenthal BD, Washington MT (2012) PCNA structure and function: insights from structures of PCNA complexes and post-translationally modified PCNA. Subcell Biochem 62:281–299

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Freudenthal BD, Gakhar L, Ramaswamy S, Washington MT (2010) Structure of monoubiquitinated PCNA and implications for translesion synthesis and DNA polymerase exchange. Nat Struct Mol Biol 17(4):479–484

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Freudenthal BD, Brogie JE, Gakhar L, Kondratick CM, Washington MT (2011) Crystal structure of SUMO-modified proliferating cell nuclear antigen. J Mol Biol 406(1):9–17

    Article  CAS  PubMed  Google Scholar 

  • Fukuda K, Morioka H, Imajou S, Ikeda S, Ohtsuka E, Tsurimoto T (1995) Structure-function relationship of the eukaryotic DNA replication factor, proliferating cell nuclear antigen. J Biol Chem 270(38):22527–22534

    Article  CAS  PubMed  Google Scholar 

  • Georgescu RE, Kim SS, Yurieva O, Kuriyan J, Kong XP, O’Donnell M (2008) Structure of a sliding clamp on DNA. Cell 132(1):43–54

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Gulbis JM, Kelman Z, Hurwitz J, O’Donnell M, Kuriyan J (1996) Structure of the C-terminal region of p21(WAF1/CIP1) complexed with human PCNA. Cell 87(2):297–306

    Article  CAS  PubMed  Google Scholar 

  • Hishiki A, Hashimoto H, Hanafusa T, Kamei K, Ohashi E, Shimizu T, Ohmori H, Sato M (2009) Structural basis for novel interactions between human translesion synthesis polymerases and proliferating cell nuclear antigen. J Biol Chem 284(16):10552–10560

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Kong XP, Onrust R, O’Donnell M, Kuriyan J (1992) Three-dimensional structure of the beta subunit of E. coli DNA polymerase III holoenzyme: a sliding DNA clamp. Cell 69(3):425–437

    Article  CAS  PubMed  Google Scholar 

  • Krishna TS, Kong XP, Gary S, Burgers PM, Kuriyan J (1994) Crystal structure of the eukaryotic DNA polymerase processivity factor PCNA. Cell 79(7):1233–1243

    Article  CAS  PubMed  Google Scholar 

  • Mayanagi K, Kiyonari S, Saito M, Shirai T, Ishino Y, Morikawa K (2009) Mechanism of replication machinery assembly as revealed by the DNA ligase-PCNA-DNA complex architecture. Proc Natl Acad Sci U S A 106(12):4647–4652

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • McNally R, Bowman GD, Goedken ER, O’Donnell M, Kuriyan J (2010) Analysis of the role of PCNA-DNA contacts during clamp loading. BMC Struct Biol 10:3

    Article  PubMed  PubMed Central  CAS  Google Scholar 

  • Miyachi K, Fritzler MJ, Tan EM (1978) Autoantibody to a nuclear antigen in proliferating cells. J Immunol 121(6):2228–2234

    CAS  PubMed  Google Scholar 

  • Moldovan GL, Pfander B, Jentsch S (2007) PCNA, the maestro of the replication fork. Cell 129(4):665–679

    Article  CAS  PubMed  Google Scholar 

  • Papouli E, Chen S, Davies AA, Huttner D, Krejci L, Sung P, Ulrich HD (2005) Crosstalk between SUMO and ubiquitin on PCNA is mediated by recruitment of the helicase Srs2p. Mol Cell 19(1):123–133

    Article  CAS  PubMed  Google Scholar 

  • Sakurai S, Kitano K, Yamaguchi H, Hamada K, Okada K, Fukuda K, Uchida M, Ohtsuka E, Morioka H, Hakoshima T (2005) Structural basis for recruitment of human flap endonuclease 1 to PCNA. EMBO J 24(4):683–693

    Article  CAS  PubMed  Google Scholar 

  • Stukenberg PT, Studwell-Vaughan PS, O’Donnell M (1991) Mechanism of the sliding beta-clamp of DNA polymerase III holoenzyme. J Biol Chem 266(17):11328–11334

    CAS  PubMed  Google Scholar 

  • Tan CK, Castillo C, So AG, Downey KM (1986) An auxiliary protein for DNA polymerase-delta from fetal calf thymus. J Biol Chem 261(26):12310–12316

    CAS  PubMed  Google Scholar 

  • Zhou Y, Hingorani MM (2012) Impact of individual PCNA-DNA contacts on clamp loading and function on DNA. J Biol Chem 287(42):35370–35381

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Zhuang Z, Johnson RE, Haracska L, Prakash L, Prakash S, Benkovic SJ (2008) Regulation of polymerase exchange between Poleta and Poldelta by monoubiquitination of PCNA and the movement of DNA polymerase holoenzyme. Proc Natl Acad Sci U S A 105(14):5361–5366

    Article  CAS  PubMed  PubMed Central  Google Scholar 

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Correspondence to Samir M. Hamdan .

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Oke, M., Zaher, M.S., Hamdan, S.M. (2018). PCNA Structure and Interactions with Partner Proteins. In: Wells, R.D., Bond, J.S., Klinman, J., Masters, B.S.S. (eds) Molecular Life Sciences. Springer, New York, NY. https://doi.org/10.1007/978-1-4614-1531-2_138

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