Skip to main content

Tertiary Structure of Proteins

  • Chapter
  • First Online:
The Physics of Proteins

Part of the book series: Biological and Medical Physics, Biomedical Engineering ((BIOMEDICAL))

Abstract

In Chapter 4, we gave a brief introduction to proteins. The structures of a very large number of proteins have been determined and it is possible to ask fundamental questions: Given the primary sequence, what is tertiary structure? How does the protein fold into the final structure? This “folding problem” has attracted a great deal of attention, and it has become an industry. (One of the Web search engines has more than 106 entries.) We will not treat the folding problem here, but refer to review articles for more information [1]–[7]. Here we discuss a simpler problem, how the main secondary structures, ?-helices and ? pleated sheets , combine to form globular proteins. The folding problem is also treated in Section 17.3.

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Chapter
USD 29.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 89.00
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 119.99
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 169.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

Preview

Unable to display preview. Download preview PDF.

Unable to display preview. Download preview PDF.

References

  1. F. M. Richards, D. S. Eisenberg, and P. S. Kim. Protein Folding Mechanisms. Academic Press, San Diego, 2000.

    Google Scholar 

  2. R. Bonneau and D. Baker. Ab initio protein structure prediction: Progress and prospects. Ann. Rev. Biophys. Biomol. Struct., 30:173–89, 2001.

    Article  Google Scholar 

  3. S. S. Plotkin and J. N. Onuchic. Understanding protein folding with energy landscape theory: Part I: Basic concepts. Q. Rev. Biophys., 35:111–67, 2002.

    Google Scholar 

  4. S. S. Plotkin and J. N. Onuchic. Understanding protein folding with energy landscape theory: Part II: Quantitative aspects Q. Rev. Biophys., 35:205-86, 2003.

    Google Scholar 

  5. C. Dobson. Principles of protein folding, misfolding, and aggregation. Seminars in Cell and Developmental Biology, 15:3–16, 2004.

    Article  Google Scholar 

  6. J. N. Onuchic and P. G. Wolynes. Theory of protein folding. Curr. Opin. Struct. Bio., 14:70–5, 2004.

    Article  Google Scholar 

  7. M. Oliverberg and P. G. Wolynes. The experimental survey of protein folding energy landscapes. Q. Rev. Biophys., 38:245-86, 2005. Published online June 19, 2006.

    Article  Google Scholar 

  8. C. Chothia, M. Levitt, and D. Richardson. Structure of proteins: packing of alpha-helices and pleated sheets. Proc. Natl. Acad. Sci. USA, 74:4130–4, 1977.

    Article  ADS  Google Scholar 

  9. D. A. D. Parry and E. N. Baker. Biopolymers. Rep. Progr. Phys., 47:1133–232, 1984.

    Article  ADS  Google Scholar 

  10. C. Chothia. Principles that determine the structure of proteins. Ann. Rev. Biochem., 53:537–72, 1984.

    Article  Google Scholar 

  11. M. Levitt and C. Chothia. Structural patterns in globular proteins. Nature, 261(5561):552–8, 1976.

    Article  ADS  Google Scholar 

  12. J. S. Richardson . ? sheet topology and the relatedness of proteins. Nature, 268(5620):495–500, 1977.

    Article  ADS  Google Scholar 

  13. J. S. Richardson. The anatomy and taxonomy of protein structure. Adv. Protein Chem., 34:167–339, 1981.

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2010 Springer Science+Business Media, LLC

About this chapter

Cite this chapter

Frauenfelder, H. (2010). Tertiary Structure of Proteins. In: Chan, S., Chan, W. (eds) The Physics of Proteins. Biological and Medical Physics, Biomedical Engineering. Springer, New York, NY. https://doi.org/10.1007/978-1-4419-1044-8_9

Download citation

Publish with us

Policies and ethics