Abstract
Antiretroviral therapy changed the face of HIV/AIDS from that of soon and certain death to that of a chronic disease in the years following introduction of highly active antiretroviral therapy in 1995–1996 (initially termed HAART, but now most often abbreviated to ART since not all combinations of regimens are equally active). Since then, many new agents have been developed and introduced in response to problems of resistance, toxicity, and tolerability, and great advances have been achieved in accessibility of HIV drugs in resource-poor global regions. Potential challenges that providers of HIV therapy will face in the coming decade include continuing problems with resistance, especially where access to drugs is inconsistent, determining how best to combine new and existing agents, defining the role of preventive treatment (pre-exposure prophylaxis or PrEP), and evaluating the potential of strategies for cure in some populations.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Abbreviations
- HAART:
-
Highly active antiretroviral therapy
- ART:
-
Antiretroviral therapy
- HIV, HIV-1:
-
Human immunodeficiency virus, human immunodeficiency virus type 1
- AIDS:
-
Acquired immune deficiency syndrome
- PrEP:
-
Pre-exposure prophylaxis
- AZT:
-
Zidovudine
- ddI:
-
Didanosine
- ddC:
-
Zalcitidine
- d4T:
-
Stavudine
- 3TC:
-
Lamivudine
- FTC:
-
Emtricitabine
- ABC:
-
Abacavir
- TDF:
-
Tenofovir disoproxil fumarate
- RT:
-
Reverse transcriptase
- DNA:
-
Deoxyribonucleic acid
- RNA:
-
Ribonucleic acid
- NVP:
-
Nevirapine
- EFV:
-
Efavirenz
- ETV:
-
Etravirine
- DLV:
-
Delavirdine
- RPV:
-
Rilpivirine
- SQV:
-
Saquinavir
- IDV:
-
Indinavir
- NFV:
-
Nelfinavir
- FPV:
-
Fosamprenavir
- LPV:
-
Lopinavir
- RTV/r:
-
Ritonavir
- TPV:
-
Tipranavir
- ATV:
-
Atazanavir
- DRV:
-
Darunavir
- T20:
-
Enfurvirtide
- RAL:
-
Raltegravir
- ETG:
-
Elvitegravir
- DTG:
-
Dolutegravir
- MVC:
-
Maraviroc
- NRTI:
-
Nucleoside reverse transcriptase inhibitor
- NNRTI:
-
Non-nucleoside reverse transcriptase inhibitor
- TP:
-
Triphosphate
- NS5A:
-
Non-structural protein 5A of hepatitis C virus
- Kd:
-
Kilodalton
- PI:
-
Protease inhibitor
- INSTI:
-
Integrase strand transfer inhibitor
- CSF:
-
Cerebrospinal fluid
- CYP3A:
-
Cytochrome P450 isoform protein 3A
- HBV:
-
Hepatitis B virus
- HCV:
-
Hepatitis C virus
- DHHS:
-
Department of health and human services
- IC50:
-
Inhibitory concentration 50 %
- PCR:
-
Polymerase chain reaction
- SREBP-1:
-
Sterol regulator element-binding protein 1
- PPAR-gamma:
-
Peroxisome proliferator-activated receptor gamma
- OAT, OATP:
-
Organic anion transporter
- gUGT:
-
Glucuronosyltransferase
- CNS:
-
Central nervous system
- MDR1:
-
Multidrug resistance transporter 1
- HSCT:
-
Hematopoetic stem cell transplant
- CCR5:
-
CC Chemokine receptor 5 gene
- ANRS:
-
Agence Nationale de Recherche sur le Sida
- VISCONTI:
-
Virological and immunological studies in controllers after treatment interruption
- CD3:
-
Cluster of differentiation surface marker 3
- CD4:
-
Cluster of differentiation surface marker 4
- HDAC:
-
Histodeacytelase inhibitor
- CRISPR:
-
Clustered regularly interspaced short palindromic repeat protein
- Cas-9:
-
CRISPR-associated protein 9
- Fem-PrEP:
-
Women’s preventative treatment study
- VOICE:
-
Vaginal and oral interventions to control the epidemic
- MSM:
-
Men who have sex with men
- US:
-
United States
- IVDU:
-
Intravenous drug users
- CDC:
-
Centers for Disease Control
- NIH:
-
National Institutes of Health
- DAIDS:
-
Division of AIDS
- NIAID:
-
National Institute of Allergy and Infectious Disease
- NIMH:
-
National Institute of Mental Health
- NIDA:
-
National Institute of Drug Abuse
- NICHD:
-
National Institute of Child Health and Human Development
- NHLBI:
-
National Heart Lung and Blood Institute
- NIGMS:
-
National Institute of General Medical Sciences
- NIDDK:
-
National Institute of Diabetes and Digestive and Kidney Diseases
- NIA:
-
National Institute on Aging
- PPI:
-
Proton pump inhibitor
- ADH:
-
Alcohol dehydrogenase
- OCT2:
-
Organic cation transporter 2
- MATE1:
-
Multidrug and toxin extrusion protein 1
- UGT1A:
-
Uracil diphosphate glucuronosyltransferase 1 protein family
- CYPnLn, nLn:
-
Cytochrome protein isoforms of P-450, e.g., CYP1A2 or 1A2, CYP1A6, or 1A6.
References
Archin NM, Liberty AL, Kashuba AD, Choudhary SK, Kuruc JD, Crooks AM, Parker DC, Anderson EM, Kearney MF, Strain MC, Richman DD, Hudgens MG, Bosch RJ, Coffin JM, Eron JJ, Hazuda DJ, Margolis DM (2012) Administration of vorinostat disrupts HIV-1 latency in patients on antiretroviral therapy. Nature 487(7408):482–485 (PMCID: PMC3704185)
Archin NM, Bateson R, Tripathy MK, Crooks AM, Yang KH, Dahl NP, Kearney MF, Anderson EM, Coffin JM, Strain MC, Richman DD, Robertson KR, Kashuba AD, Bosch RJ, Hazuda DJ, Kuruc JD, Eron JJ, Margolis DM (2014) HIV-1 expression within resting CD4+ T cells after multiple doses of vorinostat. J Infect Dis 210(5):728–735. doi:10.1093/infdis/jiu155 (Epub 2014 Mar 11. PMC4148603)
Arenas-Pinto A, Grant AD, Edwards S, Weller IVD (2003) Lactic acidosis in HIV infected patients: a systematic review of published cases. Sex Transm Infect 79:340–344
Arnaudo E, Dalakas M, Shanske S, Moraes CT, DiMauro S, Schon EA (1991) Depletion of muscle mitochondrial DNA in AIDS patients with zidovudine-induced myopathy. Lancet 337(8740):508–510
Baeten JM, Donnell D, Ndase P et al (2012) Antiretroviral prophylaxis for HIV prevention in heterosexual men and women. N Engl J Med 367(5):399–410
Baxter JD, Mayers DL, Wentworth DN, Neaton JD, Hoover ML, Winters MA, Mannheimer SB, Thompson MA, Abrams DI, Brizz BJ, Ioannidis JP, Merigan TC (2000) A randomized study of antiretroviral management based on plasma genotypic antiretroviral resistance testing in patients failing therapy. AIDS 14(9):F83–F93 (The CPCRA 046 study team for the terry beirn community programs for clinical research on AIDS)
Bedimo RJ, McGinnis KA, Dunlap M, Rodriguez-Barradas MC, Justice AC (2009) Incidence of non-AIDS-defining malignancies in HIV-infected versus noninfected patients in the HAART era: impact of immunosuppression. J Acquir Immune Defic Syndr 52:203
Blanco F, Garcia-Benayas T, Jose de la Cruz J, Gonzalez-Lahoz J, Soriano V (2003) First-line therapy and mitochondrial damage: different nucleosides, different findings. HIV Clin Trials 4(1):11–19
Bogner JR, Vielhauer V, Beckmann RA, Michl G, Wille L, Salzberger B, Goebel FD (2001) Stavudine versus zidovudine and the development of lipodystrophy. J Acquir Immune Defic Syndr 27(3):237–244
Borges AH, Silverberg MJ, Wentworth D et al (2013) Predicting risk of cancer during HIV infection: the role of inflammatory and coagulation biomarkers. AIDS 27(9):1433–1441
Boubaker K, Flepp M, Sudre P, Furrer H, Haensel A, Hirschel B et al (2001) Hyperlactatemia and antiretroviral therapy: the Swiss HIV cohort study. Clin Infect Dis 33:1931–1937
Bozzette SA, Ake CF, Tam HK et al (2003) Cardiovascular and cerebrovascular events in patients treatedfor human immunodeficiency virus infection. N Engl J Med 348(8):702
Brown P, Crane L (2001) Avascular necrosis of bone in patients with human immunodeficiency virus infection: report of 6 cases and review of the literature. Clin Infect Dis 32(8):1221–1226
Caron M, Auclair M, Vigouroux C, Glorian M, Forest C, Capeau J (2001) The HIV protease inhibitor indinavir impairs sterol regulatory element-binding protein-1 intranuclear localization, inhibits preadipocyte differentiation, and induces insulin resistance. Diabetes 50:1378–1388
Carr A (2000) HIV protease inhibitor-related lipodystrophy syndrome. Clin Infect Dis 30(Suppl 2):S135–S142
Carr A, Samaras K, Chisolm DJ, Cooper DA (1881) Pathogenesis of HIV-1 protease inhibitor-associated peripheral lipodystrophy, hyperlipidaemia, and insulin resistance. Lancet 1998:351
Carr A, Samaras K, Burton S et al (1998) A syndrome of peripheral lipodystrophy (LD) hyperlipidemia and insulin resistance in patients receiving HIV protease inhibitors. AIDS 12:F51
Castagna A, Maggiolo F, Penco G, Wright D, Mills A, Grossberg R, Molina JM, Chas J, Durant J, Moreno S, Doroana M, Ait-Khaled M, Huang J, Min S, Song I, Vavro C, Nichols G, Yeo JM (2014) Dolutegravir in antiretroviral-experienced patients with raltegravir- and/or elvitegravir-resistant HIV-1: 24-week results of the phase III VIKING-3 study. J Infect Dis 210(3):354–362. doi:10.1093/infdis/jiu051 (Epub 2014 Jan 19. PubMed PMID: 24446523; PubMed Central) (VIKING-3 study group)
CDC (2011) Vital signs: HIV diagnosis, care, and treatment among persons living with HIV—United States. MMWR 63(47):1113–1117
Chesney M (2003) Adherence to HAART regimens. AIDS Patient Care STDS 17(4):169–177
Choopanya K, Martin M, Suntharasamai P et al (2013) Antiretroviral prophylaxis for HIV infection among people who inject drugs in Bangkok, Thailand (the Bangkok Tenofovir Study): a randomised, double-blind, placebo-controlled phase 3 trial. Lancet 381(9883):2083–2090
Chow YK, Hirsch MS, Merrill DP, Bechtel LJ, Eron JJ, Kaplan JC, D’Aquila RT (1993) Use of evolutionary limitations of HIV-1 multidrug resistance to optimize therapy. Nature 361(6413):650–654 (Erratum in: Nature. 1993 Aug 19; 364(6439):679. PubMed PMID: 7679778)
Chun T-W, Finzi D, Margolick J, Chadwich K, Schwartz D, Siliciano RF (1995) Fate of HIV-1-infected T cells in vivo: rates of transition to stable latency. Nat Med 1:1284–1290
Cingolani A, Antinori A, Rizzo MG, Murri R, Ammassari A, Baldini F, Di Giambenedetto S, Cauda R, De Luca A (2002) Usefulness of monitoring HIV drug resistance and adherence in individuals failing highly active antiretroviral therapy: a randomized study (ARGENTA). AIDS 16(3):369–379
Clevenbergh P, Durant J, Halfon P, Giudice P, Mondain. V, Montagne N, Schapiro JM, Boucher CA, Dellamonica P (2000) Persisting long-term benefit of genotype-guided treatment for HIV-infected patients failing HAART. The viradapt study: week 48 follow-up. Antivir Ther 5(1):65–70
Coghlan ME, Sommadossi JP, Jhala NC, Many WJ, Saag MS, Johnson VA (2001) Symptomatic lactic acidosis in hospitalized antiretroviral-treated patients with human immunodeficiency virus infection: a report of 12 cases. Clin Infect Dis 33:1914–1921
Collier AC, Coombs RW, Fischl MA, Skolnik PR, Northfelt D, Boutin P, Hooper CJ, Kaplan LD, Volberding PA, Davis LG et al (1993) Combination therapy with zidovudine and didanosine compared with zidovudine alone in HIV-1 infection. Ann Intern Med 119:786–793
Cooper DA, Gatell JM, Kroon S, Clumeck N, Millard J, Goebel FD, Bruun JN, Stingl G, Melville RL, Gonzalez-Lahoz J et al (1993) Zidovudine in persons with asymptomatic HIV infection and CD4+ cell counts greater than 400 per cubic millimeter. The European-Australian Collaborative Group. N Engl J Med 329:297–303
Craigie R (2001) HIV integrase, a brief overview from chemistry to therapeutics. J Biol Chem 276(26):23213–23216
Crauwels H, Vingerhoets J, Ryan R et al (2012) Pharmacokinetic parameters of once-daily rilpivirine following administration of efavirenz in healthy subjects. Antivir Ther 17(3):439–446
Deeks SG, Hoh R, Neilands TB, Liegler T, Aweeka F, Petropoulos CJ, Grant RM, Martin JN (2005) Interruption of treatment with individual therapeutic drug classes in adults with multidrug-resistant HIV-1 infection. J Infect Dis 192(9):1537–1544 Epub 2005 Sep 20
DeGruttola V, Smith DM, Little SJ, Miller V (2010) Developing and evaluating comprehensive HIV infection control strategies: issues and challenges. Clin Infect Dis 15(50 Suppl 3):S102–S107. doi:10.1086/651480 (Review. PubMed PMID: 20397937; PubMed Central PMCID: PMC2913596)
Department of Health and Human Services (2014) DHHS adult and adolescent guidelines—panel on antiretroviral guidelines for adults and adolescents. Guidelines for the use of antiretroviral agents in HIV-1-infected adults and adolescents. Available at http://aidsinfo.nih.gov/contentfiles/lvguidelines/AdultandAdolescentGL.pdf. Section accessed 13 Nov 2014
Dorr P, Westby M, Dobbs S, Griffin P, Irvine B, Macartney M, Mori J, Rickett G, Smith-Burchnell C, Napier C, Webster R, Armour D, Price D, Stammen B, Wood A, Perros M (2005) Maraviroc (UK-427,857), a potent, orally bioavailable, and selective small-molecule inhibitor of chemokine receptor CCR5 with broad-spectrum anti-human immunodeficiency virus type 1 activity. Antimicrob Agents Chemother 49(11):4721–4732 (PMCID: PMC1280117)
Dressman J, Kincer J, Matveev SV, Guo L, Greenberg RN, Guerin T, Meade D, Li XA, Zhu W, Uittenbogaard A, Wilson ME, Smart EJ (2003) HIV protease inhibitors promote atherosclerotic lesion formation independent of dyslipidemia by increasing CD36-dependent cholesteryl ester accumulation in macrophages. J Clin Invest 111:389–397
Duprez DA, Neuhaus J, Kuller LH et al (2012) Inflammation, coagulation and cardiovascular disease in HIV-infected individuals. PLoS One 7(9):e44454
Emini EA, Graham DJ, Gotlib L, Condra JH, Byrnes VW, Schleif WA (1993) HIV and multidrug resistance. Nature 364(6439):679
Fellay J, Marzolini C, Meaden ER, Back DJ, Buclin T, Chave JP, Decosterd LA, Furrer H, Opravil M, Pantaleo G, Retelska D, Ruiz L, Schinkel AH, Vernazza P, Eap CB, Telenti A, Swiss HIV (2002) Cohort Study. Response to antiretroviral treatment in HIV-1-infected individuals with allelic variants of the multidrug resistance transporter 1: a pharmacogenetics study. Lancet 359(9300):30–306
Feng JY, Johnson AA, Johnson KA, Anderson KS (2001) Insights into the molecular mechanism of mitochondrial toxicity by AIDS drugs. J Biol Chem 276:23832–23837
Fischl MA, Richman DD, Grieco MH, Gottlieb MS, Volberding PA, Laskin OL, Leedom JM, Groopman JE, Mildvan D, Schooley RT et al (1987) The efficacy of azidothymidine (AZT) in the treatment of patients with AIDS and AIDS-related complex. A double-blind, placebo-controlled trial. N Engl J Med 317:185–191
Fletcher CV, Acosta EP, Henry K et al (1998) Concentration-controlled zidovudine therapy. Clin Pharmacol Ther 64:331–338
Friiis-Mǿller N,Weber R, D’Armininio Monforte A et al (2003) Exposure to HAART is associated with an increased risk of myocardial infarction: the D:A:D study. In: Presented at: 10th conference on retroviruses and opportunistic, Abstract No. 130, Boston, Mass, 10–14 Feb 2003
Furman PA, Fyfe JA, St.Clair MH, Weinhold K, Rideout JL, Freeman GA et al (1986) Phosphorylation of 3′-azido-3′-deoxythymidine and selective interaction of the 5′-triphosphate with human immunodeficiency virus reverse transcriptase. Proc Natl Acad Sci 85:8333–8337
Garcia-Diaz A, McCormick A, Booth C, Gonzalez D, Sayada C, Haque T, Johnson M, Webster D (2014) Analysis of transmitted HIV-1 drug resistance using 454 ultra-deep-sequencing and the DeepChek(®)-HIV system. J Int AIDS Soc 17(4 Suppl 3):19752 (PMCID: PMC4225408)
Gilliam BL, Sajadi MM, Amoroso A, Davis CE, Cleghorn FR, Redfield RR (2007) Tenofovir and abacavir combination therapy: lessons learned from an urban clinic population. AIDS Patient Care STDS 21(4):240–246
Graham NM, Hoover DR, Park LP, Stein DS, Phair JP, Mellors JW, Detels R, Saah AJ (1996) Survival in HIV-infected patients who have received zidovudine: comparison of combination therapy with sequential monotherapy and continued zidovudine monotherapy. Multicenter AIDS cohort study group. Ann Intern Med 124:1031–1038
Grant RM, Lama JR, Anderson PL et al (2010) Preexposure chemoprophylaxis for HIV prevention in men who have sex with men. N Engl J Med 363(27):2587–2599. doi:10.1056/NEJMoa1011205
Grohskopf LA, Chillag KL, Gvetadze R et al (2013) Randomized trial of clinical safety of daily oral tenofovir disoproxil fumarate among HIV-uninfected men who have sex with men in the United States. J Acquired Immune Defic Syndr 64(1):79–86
Gulick RM, Mellors JW, Havlir D, Eron JJ, Gonzalez C, McMahon D, Richman DD, Valentine FT, Jonas L, Meibohm A, Emini EA, Chodakewitz JA (1997) Treatment with indinavir, zidovudine, and lamivudine in adults with human immunodeficiency virus infection and prior antiretroviral therapy. N Engl J Med 337(11):734–739
Hamers RL, Sigaloff KC, Kityo C, Mugyenyi P, de Wit TF (2013) Emerging HIV-1 drug resistance after roll-out of antiretroviral therapy in sub-Saharan Africa. Curr Opin HIV AIDS 8(1):19–26
Henrich TJ, Hu Z, Li JZ, Sciaranghella G, Busch MP, Keating SM et al (2013) Long-term reduction in peripheral blood HIV type 1 reservoirs following reduced-intensity conditioning allogeneic stem cell transplantation. J Infect Dis 207(11):1694–1702
Henrich TJ, Hanhauser E, Marty FM, Sirignano MN, Keating S, Lee TH, Robles YP, Davis BT, Li JZ, Heisey A, Hill AL, Busch MP, Armand P, Soiffer RJ, Altfeld M, Kuritzkes DR (2014) Antiretroviral-free HIV-1 remission and viral rebound after allogeneic stem cell transplantation: report of 2 cases. Ann Intern Med 161(5):319–327. doi:10.7326/M14-1027 (PubMed PMID: 25047577; PubMed Central PMCID: PMC4236912)
Hertogs K, Bloor S, Kemp SD, Van den Eynde C, Alcorn TM, Pauwels R, Van Houtte M, Staszewski S, Miller V, Larder BA (2000) Phenotypic and genotypic analysis of clinical HIV-1 isolates reveals extensive protease inhibitor cross-resistance: a survey of over 6000 samples. AIDS 14(9):1203–1210
Ho DD, Neumann AU, Perelson AS, Chen W, Leonard JM, Markowitz M (1995) Rapid turnover of plasma virions and CD4 lymphocytes in HIV-1 infection. Nature 373:123–126
Hunt GM, Morris L, Moorthy A, Coovadia A, Abrams EJ, Strehlau R, Kuhn L, Persaud D (2014) Concordance between allele-specific PCR and ultra-deep pyrosequencing for the detection of HIV-1 non-nucleoside reverse transcriptase inhibitor resistance mutations. J Virol Methods 207:182–187 (PMC4150030)
Hutter G, Nowak D, Mossner M, Ganepola S, Mussig A, Allers K et al (2009) Long-term control of HIV by CCR5 Delta32/Delta32 stem-cell transplantation. N Engl J Med 360(7):692–698
Iversen AK, Shafer RW, Wehrly K, Winters MA, Mullins JI, Chesebro B, Merigan TC (1996) Multidrug-resistant human immunodeficiency virus type 1 strains resulting from combination antiretroviral therapy. J Virol 70:1086–1090
Jessen H, Allen TM, STreek H (2014) How a single patient influenced HIV research—15-year follow-up. N Engl J Med 370:682–683. doi:10.1056/NEJMc1308413
Jilek BL, Zarr M, Sampah ME, Rabi SA, Bullen CK, Lai J, Shen L, Siliciano RF (2012) A quantitative basis for antiretroviral therapy for HIV-1 infection. Nat Med 18(3):446–451. doi:10.1038/nm.2649 (PubMed PMID: 22344296; PubMed Central PMCID: PMC3296892)
Johnson JA, Sax PE (2014) Beginning antiretroviral therapy for patients with HIV. Infect Dis Clin North Am 28(3):421–438
Joly V, Flandre P, Meiffredy V, Leturque N, Harel M, Aboulker JP, Yeni P (2002) Increased risk of lipoatrophy under stavudine in HIV-1-infected patients: results of a substudy from a comparative trial. AIDS 16(18):2447–2454
Kim RB (2003) Drug transporters in HIV Therapy. Top HIV Med 11(4):136–139
Knobel H, Carmona A, Grau S, Pedro-Botet J, Diez A (1998) Adherence and effectiveness of highly active antiretroviral therapy. Arch Intern Med 158(17):1953
Kohlstaedt LA, Wang J, Friedman JM, Rice PA, Steitz RA (1992) Crystal structure at 3.5 a resolution of HIV-1 reverse transcriptase complexed with an inhibitor. Science 256:1783–1790
Kretzschmar ME, Schim van der Loeff MF, Birrell PJ, De Angelis D, Coutinho RA (2013) Prospects of elimination of HIV with test-and-treat strategy. Proc Natl Acad Sci USA 110(39):15538–15543. doi:10.1073/pnas.1301801110 (Epub 2013 Sep PubMed PMID: 24009342; PubMed Central PMCID: PMC3785722)
Kulkarni SP, Shah KR, Sarma KV, Mahajan AP (2013) Clinical uncertainties, health service challenges, and ethical complexities of HIV “test-and-treat”: a systematic review. Am J Public Health. 103(6):e14–e23. doi:10.2105/AJPH.2013.301273 (Epub 2013 Apr 18. Review. PubMed PMID: 23597344)
Kuller LH, Tracy R, Belloso W et al (2008) Inflammatory and coagulation biomarkers and mortality in patients with HIV infection. PLoS Med 5(10):e203
Lalezari JP, Henry KO, Hearn M et al (2003) Enfuvirtide, an HIV-1 fusion inhibitor, for drug-resistant HIV infection in North and South America. N Engl J Med 348(22):2175–2185
Larder BA, Kemp SD, Hertogs K (2000) Quantitative prediction of HIV-1 phenotypic drug resistance from genotypes: the virtual phenotype (VirtualPhenotype). Antiviral Ther 5(suppl 3):49
Laskey SB, Siliciano RF (2014) A mechanistic theory to explain the efficacy of antiretroviral therapy. Nat Rev Microbiol 12(11):772–780. doi:10.1038/nrmicro3351 (Epub 2014 Sep 29)
Lazzarin A, Clotet B, Cooper D et al (2003) Efficacy of enfuvirtide in patients infected with drug-resistant HIV-1 in Europe and Australia. N Engl J Med 348(22):2186–2195
Lenhard JM, Furfine ES, Jain RG, Ittoop O, Orband-Miller LA, Blanchard SG, Paulik MA, Weiel JE (2000) HIV protease inhibitors block adipogenesis and increase lipolysis in vitro. Antiviral Res 47:121–129
Little SJ, Holte S, Routy JP, Daar ES, Markowitz M, Collier AC, Koup RA, Mellors JW, Connick E, Conway B, Kilby M, Wang L, Whitcomb JM, Hellmann NS, Richman DD (2002) Antiretroviral-drug resistance among patients recently infected with HIV. N Engl J Med 347(6):385–394
Loutfy MR, Antoniou T, Shen S, Diong C, Vlaicu M, Halpenny R, Kovacs C, Fletcher D, Raboud JM (2007) Virologic and immunologic impact and durability of enfuvirtide-based antiretroviral therapy in HIV-infected treatment-experienced patients in a clinical setting. HIV Clin Trials 8(1):36–44 (PMID: 17434847)
Mallal S, Nolan D, Witt C, Masel G, Martin AM, Moore C, Sayer D, Castley A, Mamotte C, Maxwell D, James I, Christiansen FT (2002) Association between presence of HLA-B*5701, HLA-DR7, and HLA-DQ3 and hypersensitivity to HIV-1 reverse-transcriptase inhibitor abacavir. Lancet 359:727–732
Mallon PW, Miller J, Cooper DA, Carr A (2003) Prospective evaluation of the effects of antiretroviral therapy on body composition in HIV-1-infected men starting therapy. AIDS 17(7):971–979
Mao C, Sudbeck EA, Venkatachalam TK, Uckun FM (2000) Structure-based drug design of non-nucleoside inhibitors for wild-type and drug resistant HIV reverse transcriptase. Biochem Pharmacol 60:1251–1265
Mathias AA, German P, Murray BP, Jain A, West S, Warren D, Hui J, Kearney BP (2010) Pharmacokinetics and pharmacodynamics of GS-9530: a novel pharmacokinetic enhancer without anti-HIV activity. Clin Pharmaco Ther 87:322–329
Mellors JW, Munoz A, Giorgi JV, Margolick JB, Tassoni CJ, Gupta P, Kingsley LA, Todd JA, Saah AJ, Detels R, Phair JP, Rinaldo CR Jr (1997) Plasma viral load and CD4+ lymphocytes as prognostic markers of HIV-1 infection. Ann Intern Med 126(12):946–954
Meng TC, Fischl MA, Boota AM, Spector SA, Bennett D, Bassiakos Y, Lai SH, Wright B, Richman DD (1992) Combination therapy with zidovudine and dideoxycytidine in patients with advanced human immunodeficiency virus infection. A phase I/II study. Ann Intern Med 116:13–20
Roberts NA, Martin JA, Kinchington D, Broadhurst AV, Craig JC, Duncan IB, Galpin SA, Handa BK, Kay J, Kröhn A, Lambert RW, Merrett, MJS, Parkes KEB, Redshaw S, Ritchie AJ, Taylor DL, Thomas GJ, Machin PJ (1990) Rational design of peptide-based HIV proteinase inhibitors. Science 248:358
Montaner JS, Harrigan PR, Jahnke N et al (2001) Multiple drug rescue therapy for HIV-infected individuals with prior virologic failure to multiple regimens. AIDS 15(1):61–69
Moore RD, Keruly JC, Chaisson RE (2001) Incidence of pancreatitis in HIV-infected patients receiving nucleoside reverse transcriptase inhibitor drugs. AIDS 15:617–620
Nachega JB, Uthman OA, del Rio C, Mugavero MJ, Rees H, Mills EJ (2014) Addressing the Achilles’ heel in the HIV care continuum for the success of a test-and-treat strategy to achieve an AIDS-free generation. Clin Infect Dis 59(Suppl 1):S21–S27. doi:10.1093/cid/ciu299 PubMed PMID: 24926028; PubMed Central PMCID:PMC4141496
Palmer S, Boltz V, Martinson N, Maldarelli F, Gray G, McIntyre J, Mellors J, Morris L, Coffin J (2006) Persistence of nevirapine-resistant HIV-1 in women after single-dose nevirapine therapy for prevention of maternal-to-fetal HIV-1 transmission. Proc Natl Acad Sci USA 103(18):7094–7099 (PMCID: PMC1459023)
Paredes R, Marconi VC, Campbell TB, Kuritzkes DR (2007) Systematic evaluation of allele-specific real-time PCR for the detection of minor HIV-1 variants with pol and env resistance mutations. J Virol Methods 146(1–2):136–46 (PMCID: PMC4195598)
Paterson DL, Swindells S, Mohr J, Brester M, Vergis EN, Squier C, Wagener MM, Singh N (2000) Adherence to protease inhibitor therapy and outcomes in patients with HIV infection. Ann Intern Med 133(1):21–30
Perelson AS, Neumann AU, Markowitz M, Leonard JM, Ho DD (1996) HIV-1 dynamics in vivo: virion clearance rate, infected cell life-span, and viral generation time. Science 271:1582–1586
Persaud D, Gay H, Ziemniak C et al (2013) Absence of detectable HIV-1 viremia after treatment cessation in an infant. N Engl J Med 369:1828–1835
Peterson L, Taylor D, Roddy R et al (2007) Tenofovir disoproxil fumarate for prevention of HIV infection in women: a phase 2, double-blind, randomized, placebo-controlled trial. PLoS Clin Trials 2(5):e27
Pollard RB, Robinson P, Dransfield K (1998) Safety profile of nevirapine, a nonnucleoside reverse transcriptase inhibitor for the treatment of human immunodeficiency virus infection. Clin Ther 20:1071–1089
Pozniak AL, Morales-Ramirez J, Katabira E et al (2010) TMC278-C204 study group. Efficacy and safety of TMC278 in antiretroviral-naive HIV-1 patients: week 96 results of a phase IIb randomized trial. AIDS 24(1):55–565
Prins JM, Jurriaans S, van Praag RM, Blaak H, van Rij R, Schellekens PT, ten Berge IJ, Yong SL, Fox CH, Roos MT, de Wolf F, Goudsmit J, Schuitemaker H, Lange JM (1999) Immuno-activation with anti-CD3 and recombinant human IL-2 in HIV-1-infected patients on potent antiretroviral therapy. AIDS 13(17):2405–2410
Rainwater-Lovett K, Luzuriaga K, Persaud D (2015) Very early combination antiretroviral therapy in infants: prospects for cure. Curr Opin HIV AIDS 10(1):4–11. doi:10.1097/COH.0000000000000127
Rasmussen TA, Tolstrup M, Winckelmann A, Østergaard L, Søgaard OS (2013) Eliminating the latent HIV reservoir by reactivation strategies: advancing to clinical trials. Hum Vaccin Immunother 9(4):790–799. doi:10.4161/hv.23202 (Epub 2013 Apr 1. Review. PMCID: PMC3903897)
Richman D (2000) Principles of HIV resistance testing and overview of assay performance characteristics. Antivir Ther 5:27–31
Rimsky L, Vingerhoets J, Van Eygen V et al (2012) Genotypic and phenotypic characterization of HIV-1 isolates obtained from patients on rilpivirine therapy experiencing virologic failure in the phase 3 ECHO and THRIVE studies: 48-week analysis. J Acquir Immune Defic Syndr. 59(1):39–346
Rockstroh JK (2015) Optimal therapy of HIV/HCV co-infected patients with direct acting antivirals. Liver Int 35(Suppl 1):51–555. doi:10.1111/liv.12721
Saag MS, Holodniy M, Kuritzkes DR, O’Brien WA, Coombs R, Poscher ME, Jacobsen DM, Shaw GM, Richman DD, Volberding PA (1996) HIV viral load markers in clinical practice. Nat Med 2(6):625–629
Sabin CA, Worm SW, Weber R et al (2008) Use of nucleoside reverse transcriptase inhibitors and risk of myocardial infarction in HIV-infected patients enrolled in the D:A: D study: a multi-cohort collaboration. Lancet 371(9622):1417–1426
Sáez-Cirión A, Bacchus C, Hocqueloux L, Avettand-Fenoel V, Girault I, Lecuroux C, Potard V, Versmisse P, Melard A, Prazuck T, Descours B, Guergnon J, Viard JP, Boufassa F, Lambotte O, Goujard C, Meyer L, Costagliola D, Venet A, Pancino G, Autran B, Rouzioux C (2013) Post-treatment HIV-1 controllers with a long-term virological remission after the interruption of early initiated antiretroviral therapy ANRS VISCONTI study. PLoS Pathog 9(3):e1003211 (PMC3597518 ANRS) (VISCONTI study group)
Sandler NG, Wand H, Roque A et al (2011) Plasma levels of soluble CD14 independently predict mortality in HIV infection. JInfect Dis 203(6):780–790
Schooley RT, Ramirez-Ronda C, Lange JM, Cooper DA, Lavelle J, Lefkowitz L, Moore M, Larder BA, St Clair M, Mulder JW, McKinnis R, Pennington KN, Harrigan PR, Kinghorn I, Steel H, Rooney JF (1996) Virologic and immunologic benefits of initial combination therapy with zidovudine and zalcitabine or didanosine compared with zidovudine monotherapy. Wellcome Resistance Study Collaborative Group. J Infect Dis 173:1354–1366
Scribner AN, Troia-Cancio PV, Cox BA, Marcantonio D, Hamid F, Keiser P, Levi M, Allen B, Murphy K, Jones RE, Skiest DJ (2000) Osteonecrosis in HIV: a case-control study. J Acquir Immune Defic Syndr 25(1):19–25
Seminari E, Tinelli C, Minoli L, Sacchi P, Filice G, Zocchetti C, Meneghetti G, Bruno R, Maserati R (2002) Evaluation of the risk factors associated with lipodystrophy development in a cohort of HIV-positive patients. Antivir Ther 7(3):175–180
Shafer RW (2002) Genotypic testing for human immunodeficiency virus type 1 drug resistance. Clin Microbiol Rev 15:247–277
Shen L, Rabi SA, Sedaghat AR, Shan L, Lai J, Xing S, Siliciano RF (2011) A critical subset model provides a conceptual basis for the high antiviral activity of major HIV drugs. Sci Trans Med 3(91):91ra63. doi:10.1126/scitranslmed.3002304 (PubMed PMID: 21753122; PubMed Central PMCID: PMC3488347)
Shiels MS, Pfeiffer RM, Gail MH et al (2011) Cancer burden in the HIV-infected population in the United States. J Natl Cancer Inst 103(9):753–762
Simen BB, Braverman MS, Abbate I, Aerssens J, Bidet Y, Bouchez O, Gabriel C, Izopet J, Kessler HH, Stelzl E, Di Giallonardo F, Schlapbach R, Radonic A, Paredes R, Recordon-Pinson P, Sakwa J, St John EP, Schmitz-Agheguian GG, Metzner KJ, Däumer MP (2014) 454 HIV Alphastudy Group. An international multicenter study on HIV-1 drug resistance testing by 454 ultra-deep pyrosequencing. J Virol Methods 204:31–37 (PMID: 24731928)
Smerdon SJ, Jager J, Wang J, Kohlstaedt LA, Chirino AJ, Friedman JM et al (1994) Structure of the binding site for nonnucleoside inhibitors of the reverse transcriptase of human immunodeficiency virus type 1. Proc Natl Acad Sci 91:3911–3915
Smith C (2010) Factors associated with specific causes of death amongst HIV-positive individuals in the D:A: D study. AIDS 24(10):1537–1548
St Clair MH, Richards CA, Spector T, Weinhold KJ, Miller WH, Langlois AJ et al (1987) 3′-Azido-3′-deoxythymidine triphosphate as an inhibitor and substrate of purified human immunodeficiency virus reverse transcriptase. Antimicrob Agents Chemother 31:1972–1977
Strain MC, Gunthard HF, Havlir DV, Ignacio CC, Smith DM, Leigh-Brown AJ, Macaranas TR, Lam RY, Daly OA, Fischer M, Opravil M, Levine H, Bacheler L, Spina CA, Richman DD, Wong JK (2003) Heterogeneous clearance rates of long-lived lymphocytes infected with HIV: intrinsic stability predicts lifelong persistence. Proc Natl Acad Sci USA 100(8):4819–4824
Strain MC, Lada SM, Luong T, Rought SE, Gianella S, Terry VH, Spina CA, Woelk CH, Richman DD (2013) Highly precise measurement of HIV DNA by droplet digital PCR. PLoS One 8(4):e55943 (PMCID: PMC3616050)
Tang MW, Shafer RW (2012) HIV-1 antiretroviral resistance: scientific principles and clinical applications. Drugs. 72(9):e1–e25 (PMCID: PMC3689909)
Thigpen MC, Kebaabetswe PM, Paxton LA et al (2012) Antiretroviral preexposure prophylaxis for heterosexual HIV transmission in Botswana. N Engl J Med 367(5):423–434
Toji L, Cohen S (1969) The enzymatic termination of polydeoxynucleotides by 2′,3′-dideoxydenosine triphosphate. Proc Natl Acad Sci 63:871–877
Tural C, Ruiz L, Holtzer C, Schapiro J, Viciana P, Gonzalez J, Domingo P, Boucher C, Rey-Joly C, Clotet B (2002) Havana study group. Clinical utility of HIV-1 genotyping and expert advice: the Havana trial. AIDS 16(2):209–218
United States Food and Drug Administration (2014) Antiretroviral drugs used in the treatment of HIV infection. Sept 2014. http://www.fda.gov/ForPatients/Illness/HIVAIDS/Treatment/ucm118915.htm
US Public Health Service (2014) Preexposure prophylaxis for the prevention of HIV infection in the united states—2014 clinical practice guideline. Centers for disease control, URL—http://www.cdc.gov/hiv/pdf/PrEPguidelines2014.pdf
Valencia ME, Barreiro P, Soriano V, Blanco F, Moreno V, Lahoz JG (2003) Avascular necrosis in HIV-infected patients receiving antiretroviral treatment: study of seven cases. HIV Clin Trials 4(2):132–136
Van Damme L, Corneli A, Ahmed K et al (2012) Preexposure prophylaxis for HIV infection among African women. N Engl J Med 367(5):411–422
Wei DG, Chiang V, Fyne E, Balakrishnan M, Barnes T, Graupe M, Hesselgesser J, Irrinki A, Murry JP, Stepan G, Stray KM, Tsai A, Yu H, Spindler J, Kearney M, Spina CA, McMahon D, Lalezari J, Sloan D, Mellors J, Geleziunas R, Cihlar T (2014) Histone deacetylase inhibitor romidepsin induces HIV expression in CD4 T cells from patients on suppressive antiretroviral therapy at concentrations achieved by clinical dosing. PLoS Pathog 10(4):e1004071 (PMCID: PMC3983056)
Wensing AM, Calvez V, Günthard HF, Johnson VA, Paredes R, Pillay D, Shafer RW, Richman DD (2014) 2014 Update of the drug resistance mutations in HIV-1. Top Antivir Med 22(3):642–650 (PubMed PMID: 25101529)
World Health Organization (2014) Global update on the health sector response to HIV. HIV reporting. ISBN 9789241507585
Worm D, Kirk O, Andersen O, Vinten J, Gerstoft J, Katzenstein TL, Nielsen H, Pedersen CR (2002) Clinical lipoatrophy in HIV-1 patients on HAART is not associated with increased abdominal girth, hyperlipidaemia or glucose intolerance. HIV Med 3(4):239–246
Worm SW, Bower M, Reiss P et al (2013) Non-AIDS defining cancers in the D:A: D study–time trends and predictors of survival: a cohort study. BMC Infect Dis 13:471
Yatchoan R, Broder S (1987) Development of antiretroviral therapy for the acquired immunodeficiency syndrome and related disorders; a progress report. N Engl J Med 316:557–564
Youle M, Tyrer M, Fisher M et al (2002) Brief report: two-year outcome of a multidrug regimen in patients who did not respond to a protease inhibitor regimen. J Acquir Immun Defic Syndr 29(1):58–61
Yukl SA, Boritz E, Busch M, Bentsen C, Chun TW, Douek D et al (2013) Challenges in detecting HIV persistence during potentially curative interventions: a study of the Berlin patient. PLoS Pathog 9(5):e1003347
Acknowledgments:
The authors wish to thank the Veterans Administration and the VA San Diego Healthcare System for their continued support for excellence in clinical care of HIV-infected veterans. This work was also supported by the University of California, San Diego, Center for AIDS Research, NIH/DAIDS P30 AI036214, which is in turn supported by the following NIH Institutes and Centers: NIAID, NCI, NIMH, NIDA, NICHD, NHLBI, NIA, NIGMS, and NIDDK. Thanks for assistance, proofing, and comments from Douglas Richman, David Goodsell, Bruce Torbett, and Wei-Wei Chiu.
Author information
Authors and Affiliations
Corresponding author
Editor information
Editors and Affiliations
Rights and permissions
Copyright information
© 2015 Springer International Publishing Switzerland
About this chapter
Cite this chapter
Looney, D., Ma, A., Johns, S. (2015). HIV Therapy—The State of ART. In: Torbett, B., Goodsell, D., Richman, D. (eds) The Future of HIV-1 Therapeutics. Current Topics in Microbiology and Immunology, vol 389. Springer, Cham. https://doi.org/10.1007/82_2015_440
Download citation
DOI: https://doi.org/10.1007/82_2015_440
Published:
Publisher Name: Springer, Cham
Print ISBN: 978-3-319-18517-0
Online ISBN: 978-3-319-18518-7
eBook Packages: Biomedical and Life SciencesBiomedical and Life Sciences (R0)