Skip to main content
Log in

Neuroscience

Mapping of the zebrafish brain takes shape

  • News & Views
  • Published:

From Nature Methods

View current issue Submit your manuscript

The generation of a whole larval zebrafish brain electron microscopy volume in tandem with automated tools lays the groundwork for producing the first vertebrate brain connectome.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1: Progress in EM volume size and workflow for connectomics.

References

  1. White, J. G., Southgate, E., Thomson, J. N. & Brenner, S. Phil. Trans. R. Soc. Lond. B 314, 1–340 (1986).

    Article  CAS  Google Scholar 

  2. Zheng, Z. et al. Cell 174, 730–743.e22 (2018).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  3. MICrONS Consortium et al. Preprint at bioRxiv https://doi.org/10.1101/2021.07.28.454025 (2021).

  4. Svara, F. et al. Nat. Methods https://doi.org/10.1038/s41592-022-01621-0 (2022).

    Article  PubMed  Google Scholar 

  5. Schubert, P. J. et al. Nat. Methods https://doi.org/10.1038/s41592-022-01624-x (2022).

    Article  PubMed  Google Scholar 

  6. Januszewski, M. et al. Nat. Methods 15, 605–610 (2018).

    Article  CAS  PubMed  Google Scholar 

  7. Dorkenwald, S. et al. Nat. Methods 19, 119–128 (2022).

    Article  CAS  PubMed  Google Scholar 

  8. Schubert, P. J., Dorkenwald, S., Januszewski, M., Jain, V. & Kornfeld, J. Nat. Commun. 10, 2736 (2019).

    Article  PubMed  PubMed Central  Google Scholar 

  9. Boulch, A. Comput. Graph. 88, 24–34 (2020).

    Article  Google Scholar 

  10. Bock, D. D. et al. Nature 471, 177–182 (2011).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  11. Wanner, A. A., Genoud, C., Masudi, T., Siksou, L. & Friedrich, R. W. Nat. Neurosci. 19, 816–825 (2016).

    Article  CAS  PubMed  Google Scholar 

  12. Ohyama, T. et al. Nature 520, 633–639 (2015).

    Article  CAS  PubMed  Google Scholar 

  13. Schlegel, P., Costa, M. & Jefferis, G. S. Curr. Opin. Insect Sci. 24, 96–105 (2017).

    Article  PubMed  Google Scholar 

Download references

Acknowledgements

The authors are supported by funding from the Wellcome Trust (Collaborative Award 203261/Z/16/Z and 221300/Z/20/Z).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Marta Costa.

Ethics declarations

Competing Interests

The authors declare no competing interests.

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Brooks, P., Champion, A. & Costa, M. Mapping of the zebrafish brain takes shape. Nat Methods 19, 1345–1346 (2022). https://doi.org/10.1038/s41592-022-01637-6

Download citation

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1038/s41592-022-01637-6

  • Springer Nature America, Inc.

Navigation