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RefMet: a reference nomenclature for metabolomics

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Fig. 1: Overview of the central role of RefMet in the Metabolomics Workbench infrastructure.

References

  1. Pham, D. N. K., Roy, M., Kreider-Mueller, A., Golen, J. A. & Manke, D. R. Metabolites 9, 28 (2019).

    Article  CAS  Google Scholar 

  2. Sud, M. et al. Nucleic Acids Res. 44, D463–D470 (2016). D1.

    Article  CAS  Google Scholar 

  3. Fahy, E., Cotter, D., Sud, M. & Subramaniam, S. Biochim. Biophys. Acta 1811, 637–647 (2011).

    Article  CAS  Google Scholar 

  4. Liebisch, G. et al. J. Lipid Res. https://doi.org/10.1194/jlr.S120001025 (2020).

  5. Fahy, E. et al. J. Lipid Res. 46, 839–861 (2005).

    Article  CAS  Google Scholar 

  6. Fahy, E. et al. J. Lipid Res. 50, S9–S14 (2009). (Suppl.).

    Article  Google Scholar 

  7. Djoumbou Feunang, Y. et al. J. Cheminform. 8, 61 (2016).

    Article  Google Scholar 

  8. Sumner, L. W. et al. Metabolomics 3, 211–221 (2007).

    Article  CAS  Google Scholar 

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Acknowledgements

This work is supported by NIH grants U2C-DK119886 and OT2-OD030544.

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Authors and Affiliations

  1. Department of Bioengineering, University of California San Diego, La Jolla, CA, USA

    Eoin Fahy & Shankar Subramaniam

Authors
  1. Eoin Fahy
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  2. Shankar Subramaniam
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Contributions

RefMet was conceived by E.F. along with discussions with S.S. E.F. carried out the development and the curation efforts. The manuscript was drafted by E.F. and revised by S.S. and E.F. S.S. is the principal investigator for the project.

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Correspondence to Eoin Fahy.

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The authors declare no competing interests.

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Editorial note: This article has been peer reviewed.

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Supplementary Information

Supplementary Fig. 1 and Tables 1–3

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Fahy, E., Subramaniam, S. RefMet: a reference nomenclature for metabolomics. Nat Methods 17, 1173–1174 (2020). https://doi.org/10.1038/s41592-020-01009-y

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